BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_D04 (655 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC139.06 |hat1|SPAC23C4.01|histone acetyltransferase Hat1|Schi... 37 0.002 SPBC3D6.05 |ptp4||phosphatidate cytidylyltransferase Ptp4 |Schiz... 28 1.4 SPBP8B7.10c |||U3 snoRNP-associated protein Utp16 |Schizosacchar... 27 3.1 >SPAC139.06 |hat1|SPAC23C4.01|histone acetyltransferase Hat1|Schizosaccharomyces pombe|chr 1|||Manual Length = 378 Score = 37.1 bits (82), Expect = 0.002 Identities = 17/72 (23%), Positives = 35/72 (48%) Frame = +1 Query: 358 VXDLENEETSFGPDMCHQVFGXNXNIFGYTDLHIKLYYSAGSLQTYLGIDYTDKIEPSKS 537 V + ++ + P + +FG I+GY DL++ + Y + L I Y++++ P Sbjct: 20 VNEKHEKDCQYHPSNTYAIFGDAEVIYGYKDLNVTITYECPLMVPKLEISYSERLAPDSG 79 Query: 538 XRMKADDVXGAL 573 ++ D+ G L Sbjct: 80 --VEPTDIEGTL 89 >SPBC3D6.05 |ptp4||phosphatidate cytidylyltransferase Ptp4 |Schizosaccharomyces pombe|chr 2|||Manual Length = 218 Score = 27.9 bits (59), Expect = 1.4 Identities = 10/13 (76%), Positives = 12/13 (92%) Frame = -2 Query: 99 IPFPWICLL*NGF 61 IPFPW+CL+ NGF Sbjct: 176 IPFPWLCLI-NGF 187 >SPBP8B7.10c |||U3 snoRNP-associated protein Utp16 |Schizosaccharomyces pombe|chr 2|||Manual Length = 346 Score = 26.6 bits (56), Expect = 3.1 Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Frame = -1 Query: 301 KHQSFCKINNGFCRSNSRV--NFIVNIFLILQKWRCVIYISTPIKSKFCFTLLTAENL 134 K S C++++ + S + +F F++L+ C++ IK+ C T ENL Sbjct: 59 KFHSHCQLSSSYTNSGQKSFKSFNSLRFIVLKSKTCLLRYKLLIKTFCCITYSKIENL 116 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,600,045 Number of Sequences: 5004 Number of extensions: 51583 Number of successful extensions: 99 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 97 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 99 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 295793106 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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