BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_D03 (651 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC3B8.01c |arh1||NADPH-adrenodoxin reductase Arh1 |Schizosacch... 126 3e-30 SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces ... 54 2e-08 SPAC20G8.04c |||mitochondrial electron transfer flavoprotein-ubi... 32 0.083 SPBC646.13 |sds23|psp1, moc1|inducer of sexual development Sds23... 26 0.11 SPBC354.15 |fap1||L-pipecolate oxidase|Schizosaccharomyces pombe... 30 0.33 SPAC16.04 |dus3||tRNA dihydrouridine synthase Dus3 |Schizosaccha... 28 1.3 SPAC1782.01 ||SPAPYUG7.07|proteasome component|Schizosaccharomyc... 27 3.1 SPBC3F6.03 |trr1|caf4|thioredoxin reductase Trr1|Schizosaccharom... 27 3.1 SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar... 27 3.1 SPAC26F1.14c |aif1|SPAC29A4.01c|apoptosis-inducing factor homolo... 27 3.1 SPBP16F5.08c |||flavin dependent monooxygenase |Schizosaccharomy... 26 5.4 SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|... 25 7.2 SPAC1002.09c |dld1|dldh|dihydrolipoamide dehydrogenase Dld1|Schi... 25 9.5 >SPBC3B8.01c |arh1||NADPH-adrenodoxin reductase Arh1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 469 Score = 126 bits (304), Expect = 3e-30 Identities = 61/121 (50%), Positives = 82/121 (67%), Gaps = 1/121 (0%) Frame = +2 Query: 290 RTLNRFYSANNYTKIPRVCIVGAGPAGFYAAMHLTKNI-QCKIDLIEKLPVPFGLIRYGV 466 R + R YS T P V I+G+GPA FY A L +N KID+ E PVPFGL+RYGV Sbjct: 4 RFIKRTYSTQ--TSSPVVGIIGSGPAAFYTAHRLLRNDPNVKIDMFESRPVPFGLVRYGV 61 Query: 467 APDHPEVKNVINQFTKVAQRPEVNFYGNVTLGKDITLNQLRQHYDAVLLTYGAEKDKTLG 646 APDHPEVK+V ++F+++A+ + F GNV +G D++L L ++YD ++L YGA DK LG Sbjct: 62 APDHPEVKHVEHKFSEIAESTQFRFLGNVNVGTDVSLRDLTKNYDCLVLAYGAAGDKRLG 121 Query: 647 I 649 I Sbjct: 122 I 122 >SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 2111 Score = 53.6 bits (123), Expect = 2e-08 Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 2/106 (1%) Frame = +2 Query: 338 RVCIVGAGPAGFYAAMHLTKNIQCKIDLIEKLPVPFGLIRYGVAPDHPEVKNVINQFTKV 517 RV I+G+GPAG AA L + + + E+ P GL++YG+ P+ K V+ + ++ Sbjct: 1757 RVAIIGSGPAGLAAADQLNR-AGHHVVIYERADRPGGLLQYGI-PNMKLDKKVVERRIQL 1814 Query: 518 AQRPEVNFYGNVTLGK--DITLNQLRQHYDAVLLTYGAEKDKTLGI 649 + NV +GK D++L++L + YDAV+L G+ + L I Sbjct: 1815 MIDEGIEVLTNVEVGKNGDVSLDELHKVYDAVVLASGSTVPRDLPI 1860 >SPAC20G8.04c |||mitochondrial electron transfer flavoprotein-ubiquinone oxidoreductase|Schizosaccharomyces pombe|chr 1|||Manual Length = 632 Score = 31.9 bits (69), Expect = 0.083 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 5/72 (6%) Frame = +2 Query: 242 FHESVKI*NKMTFGNLRTLNRFYSANNYTKIPRVCIVGAGPAGFYAAMHLTK-----NIQ 406 FH S N++T NLR L+ + + VCIVGAGPAG AA+ + + N Sbjct: 64 FHSSSVRLNELT-DNLRKLD---TIEREVEDVDVCIVGAGPAGLSAAIRIKQQAAKANRD 119 Query: 407 CKIDLIEKLPVP 442 ++ ++EK P Sbjct: 120 IRVVVLEKAAEP 131 >SPBC646.13 |sds23|psp1, moc1|inducer of sexual development Sds23/Moc1|Schizosaccharomyces pombe|chr 2|||Manual Length = 408 Score = 26.2 bits (55), Expect(2) = 0.11 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = -2 Query: 497 SHFLLQGDLELHHILLIRRVPEVFLLNQSC 408 + F L G++ L + + R V+LLN+SC Sbjct: 247 AQFRLLGNISLVDVKYVTRSSSVYLLNKSC 276 Score = 23.8 bits (49), Expect(2) = 0.11 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = -2 Query: 320 YLLNKICSKFLNFRKS 273 YLLNK C+ FL+ KS Sbjct: 270 YLLNKSCAHFLSVIKS 285 >SPBC354.15 |fap1||L-pipecolate oxidase|Schizosaccharomyces pombe|chr 2|||Manual Length = 412 Score = 29.9 bits (64), Expect = 0.33 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = +2 Query: 341 VCIVGAGPAGFYAAMHLTKNIQCKIDLIEKLPVP 442 V IVGAG G AA+ LTK I ++++ P P Sbjct: 7 VIIVGAGVFGLSAALELTKRGGYTIKILDRAPPP 40 >SPAC16.04 |dus3||tRNA dihydrouridine synthase Dus3 |Schizosaccharomyces pombe|chr 1|||Manual Length = 617 Score = 27.9 bits (59), Expect = 1.3 Identities = 19/65 (29%), Positives = 28/65 (43%) Frame = +2 Query: 353 GAGPAGFYAAMHLTKNIQCKIDLIEKLPVPFGLIRYGVAPDHPEVKNVINQFTKVAQRPE 532 GAG + L +N+Q + ++PV L R G DHP VKN+I + Sbjct: 349 GAGSSLLENPGRLLRNLQGMDAVSGQIPVTVKL-RMGNKDDHPVVKNLIGRIFNETNTSA 407 Query: 533 VNFYG 547 +G Sbjct: 408 ATLHG 412 >SPAC1782.01 ||SPAPYUG7.07|proteasome component|Schizosaccharomyces pombe|chr 1|||Manual Length = 1679 Score = 26.6 bits (56), Expect = 3.1 Identities = 12/44 (27%), Positives = 24/44 (54%) Frame = +2 Query: 458 YGVAPDHPEVKNVINQFTKVAQRPEVNFYGNVTLGKDITLNQLR 589 + A H EV + ++FT+ + P++ +V + DI L++ R Sbjct: 201 FASADSHSEVARLADEFTRDSGLPDLENLSHVNVLLDIALDKFR 244 >SPBC3F6.03 |trr1|caf4|thioredoxin reductase Trr1|Schizosaccharomyces pombe|chr 2|||Manual Length = 322 Score = 26.6 bits (56), Expect = 3.1 Identities = 10/20 (50%), Positives = 16/20 (80%) Frame = +2 Query: 338 RVCIVGAGPAGFYAAMHLTK 397 +V I+G+GPAG AA++L + Sbjct: 5 KVVIIGSGPAGHTAAIYLAR 24 >SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosaccharomyces pombe|chr 3|||Manual Length = 902 Score = 26.6 bits (56), Expect = 3.1 Identities = 9/20 (45%), Positives = 12/20 (60%) Frame = +1 Query: 325 HKNSSSMYCWSWSCRLLCRH 384 HKN SS W+W + L +H Sbjct: 418 HKNDSSARTWNWKSKTLGQH 437 >SPAC26F1.14c |aif1|SPAC29A4.01c|apoptosis-inducing factor homolog Aif1|Schizosaccharomyces pombe|chr 1|||Manual Length = 575 Score = 26.6 bits (56), Expect = 3.1 Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 3/78 (3%) Frame = +2 Query: 335 PRVCIVGAGPAGFYAAMHL-TKNIQCKIDLIEKL-PVPFGLIRYGVAPDHPEV-KNVINQ 505 P VCI+G G AA +L KN + KI + + VP+ D P++ K++++ Sbjct: 158 PHVCIIGGGKGASVAAEYLREKNFKGKITIFTREDEVPY---------DRPKLSKSLLHD 208 Query: 506 FTKVAQRPEVNFYGNVTL 559 +K+A R + +Y ++ + Sbjct: 209 ISKLALRSK-EYYDDLDI 225 >SPBP16F5.08c |||flavin dependent monooxygenase |Schizosaccharomyces pombe|chr 2|||Manual Length = 447 Score = 25.8 bits (54), Expect = 5.4 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Frame = +2 Query: 332 IPRVCIVGAGPAGFYAAMH-LTKNIQCKIDLIEKLPVPFGLIRY 460 I ++ I+GAGP+G A L + ++ L E+ P G+ Y Sbjct: 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNY 49 >SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|||Manual Length = 1402 Score = 25.4 bits (53), Expect = 7.2 Identities = 6/24 (25%), Positives = 15/24 (62%) Frame = -3 Query: 529 WSLSHFGKLIYHIFYFRVIWSYTI 458 W + +++ + FY V+W++T+ Sbjct: 1061 WDYNRVAEMVNNFFYKSVVWTFTL 1084 >SPAC1002.09c |dld1|dldh|dihydrolipoamide dehydrogenase Dld1|Schizosaccharomyces pombe|chr 1|||Manual Length = 511 Score = 25.0 bits (52), Expect = 9.5 Identities = 7/15 (46%), Positives = 12/15 (80%) Frame = +2 Query: 341 VCIVGAGPAGFYAAM 385 +C++G GP G+ AA+ Sbjct: 48 LCVIGGGPGGYVAAI 62 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,631,428 Number of Sequences: 5004 Number of extensions: 53695 Number of successful extensions: 137 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 128 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 136 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 293780908 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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