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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_D03
         (651 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC3B8.01c |arh1||NADPH-adrenodoxin reductase Arh1 |Schizosacch...   126   3e-30
SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces ...    54   2e-08
SPAC20G8.04c |||mitochondrial electron transfer flavoprotein-ubi...    32   0.083
SPBC646.13 |sds23|psp1, moc1|inducer of sexual development Sds23...    26   0.11 
SPBC354.15 |fap1||L-pipecolate oxidase|Schizosaccharomyces pombe...    30   0.33 
SPAC16.04 |dus3||tRNA dihydrouridine synthase Dus3 |Schizosaccha...    28   1.3  
SPAC1782.01 ||SPAPYUG7.07|proteasome component|Schizosaccharomyc...    27   3.1  
SPBC3F6.03 |trr1|caf4|thioredoxin reductase Trr1|Schizosaccharom...    27   3.1  
SPCC1672.07 |||U3 snoRNP-associated protein Utp21 |Schizosacchar...    27   3.1  
SPAC26F1.14c |aif1|SPAC29A4.01c|apoptosis-inducing factor homolo...    27   3.1  
SPBP16F5.08c |||flavin dependent monooxygenase |Schizosaccharomy...    26   5.4  
SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr 1|...    25   7.2  
SPAC1002.09c |dld1|dldh|dihydrolipoamide dehydrogenase Dld1|Schi...    25   9.5  

>SPBC3B8.01c |arh1||NADPH-adrenodoxin reductase Arh1
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 469

 Score =  126 bits (304), Expect = 3e-30
 Identities = 61/121 (50%), Positives = 82/121 (67%), Gaps = 1/121 (0%)
 Frame = +2

Query: 290 RTLNRFYSANNYTKIPRVCIVGAGPAGFYAAMHLTKNI-QCKIDLIEKLPVPFGLIRYGV 466
           R + R YS    T  P V I+G+GPA FY A  L +N    KID+ E  PVPFGL+RYGV
Sbjct: 4   RFIKRTYSTQ--TSSPVVGIIGSGPAAFYTAHRLLRNDPNVKIDMFESRPVPFGLVRYGV 61

Query: 467 APDHPEVKNVINQFTKVAQRPEVNFYGNVTLGKDITLNQLRQHYDAVLLTYGAEKDKTLG 646
           APDHPEVK+V ++F+++A+  +  F GNV +G D++L  L ++YD ++L YGA  DK LG
Sbjct: 62  APDHPEVKHVEHKFSEIAESTQFRFLGNVNVGTDVSLRDLTKNYDCLVLAYGAAGDKRLG 121

Query: 647 I 649
           I
Sbjct: 122 I 122


>SPAPB1E7.07 |glt1||glutamate synthase Glt1 |Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 2111

 Score = 53.6 bits (123), Expect = 2e-08
 Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
 Frame = +2

Query: 338  RVCIVGAGPAGFYAAMHLTKNIQCKIDLIEKLPVPFGLIRYGVAPDHPEVKNVINQFTKV 517
            RV I+G+GPAG  AA  L +     + + E+   P GL++YG+ P+    K V+ +  ++
Sbjct: 1757 RVAIIGSGPAGLAAADQLNR-AGHHVVIYERADRPGGLLQYGI-PNMKLDKKVVERRIQL 1814

Query: 518  AQRPEVNFYGNVTLGK--DITLNQLRQHYDAVLLTYGAEKDKTLGI 649
                 +    NV +GK  D++L++L + YDAV+L  G+   + L I
Sbjct: 1815 MIDEGIEVLTNVEVGKNGDVSLDELHKVYDAVVLASGSTVPRDLPI 1860


>SPAC20G8.04c |||mitochondrial electron transfer
           flavoprotein-ubiquinone
           oxidoreductase|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 632

 Score = 31.9 bits (69), Expect = 0.083
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
 Frame = +2

Query: 242 FHESVKI*NKMTFGNLRTLNRFYSANNYTKIPRVCIVGAGPAGFYAAMHLTK-----NIQ 406
           FH S    N++T  NLR L+   +     +   VCIVGAGPAG  AA+ + +     N  
Sbjct: 64  FHSSSVRLNELT-DNLRKLD---TIEREVEDVDVCIVGAGPAGLSAAIRIKQQAAKANRD 119

Query: 407 CKIDLIEKLPVP 442
            ++ ++EK   P
Sbjct: 120 IRVVVLEKAAEP 131


>SPBC646.13 |sds23|psp1, moc1|inducer of sexual development
           Sds23/Moc1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 408

 Score = 26.2 bits (55), Expect(2) = 0.11
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -2

Query: 497 SHFLLQGDLELHHILLIRRVPEVFLLNQSC 408
           + F L G++ L  +  + R   V+LLN+SC
Sbjct: 247 AQFRLLGNISLVDVKYVTRSSSVYLLNKSC 276



 Score = 23.8 bits (49), Expect(2) = 0.11
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -2

Query: 320 YLLNKICSKFLNFRKS 273
           YLLNK C+ FL+  KS
Sbjct: 270 YLLNKSCAHFLSVIKS 285


>SPBC354.15 |fap1||L-pipecolate oxidase|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 412

 Score = 29.9 bits (64), Expect = 0.33
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +2

Query: 341 VCIVGAGPAGFYAAMHLTKNIQCKIDLIEKLPVP 442
           V IVGAG  G  AA+ LTK     I ++++ P P
Sbjct: 7   VIIVGAGVFGLSAALELTKRGGYTIKILDRAPPP 40


>SPAC16.04 |dus3||tRNA dihydrouridine synthase Dus3
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 617

 Score = 27.9 bits (59), Expect = 1.3
 Identities = 19/65 (29%), Positives = 28/65 (43%)
 Frame = +2

Query: 353 GAGPAGFYAAMHLTKNIQCKIDLIEKLPVPFGLIRYGVAPDHPEVKNVINQFTKVAQRPE 532
           GAG +       L +N+Q    +  ++PV   L R G   DHP VKN+I +         
Sbjct: 349 GAGSSLLENPGRLLRNLQGMDAVSGQIPVTVKL-RMGNKDDHPVVKNLIGRIFNETNTSA 407

Query: 533 VNFYG 547
              +G
Sbjct: 408 ATLHG 412


>SPAC1782.01 ||SPAPYUG7.07|proteasome component|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1679

 Score = 26.6 bits (56), Expect = 3.1
 Identities = 12/44 (27%), Positives = 24/44 (54%)
 Frame = +2

Query: 458 YGVAPDHPEVKNVINQFTKVAQRPEVNFYGNVTLGKDITLNQLR 589
           +  A  H EV  + ++FT+ +  P++    +V +  DI L++ R
Sbjct: 201 FASADSHSEVARLADEFTRDSGLPDLENLSHVNVLLDIALDKFR 244


>SPBC3F6.03 |trr1|caf4|thioredoxin reductase
           Trr1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 322

 Score = 26.6 bits (56), Expect = 3.1
 Identities = 10/20 (50%), Positives = 16/20 (80%)
 Frame = +2

Query: 338 RVCIVGAGPAGFYAAMHLTK 397
           +V I+G+GPAG  AA++L +
Sbjct: 5   KVVIIGSGPAGHTAAIYLAR 24


>SPCC1672.07 |||U3 snoRNP-associated protein Utp21
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 902

 Score = 26.6 bits (56), Expect = 3.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 325 HKNSSSMYCWSWSCRLLCRH 384
           HKN SS   W+W  + L +H
Sbjct: 418 HKNDSSARTWNWKSKTLGQH 437


>SPAC26F1.14c |aif1|SPAC29A4.01c|apoptosis-inducing factor homolog
           Aif1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 575

 Score = 26.6 bits (56), Expect = 3.1
 Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
 Frame = +2

Query: 335 PRVCIVGAGPAGFYAAMHL-TKNIQCKIDLIEKL-PVPFGLIRYGVAPDHPEV-KNVINQ 505
           P VCI+G G     AA +L  KN + KI +  +   VP+         D P++ K++++ 
Sbjct: 158 PHVCIIGGGKGASVAAEYLREKNFKGKITIFTREDEVPY---------DRPKLSKSLLHD 208

Query: 506 FTKVAQRPEVNFYGNVTL 559
            +K+A R +  +Y ++ +
Sbjct: 209 ISKLALRSK-EYYDDLDI 225


>SPBP16F5.08c |||flavin dependent monooxygenase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 447

 Score = 25.8 bits (54), Expect = 5.4
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 332 IPRVCIVGAGPAGFYAAMH-LTKNIQCKIDLIEKLPVPFGLIRY 460
           I ++ I+GAGP+G   A   L +    ++ L E+   P G+  Y
Sbjct: 6   IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNY 49


>SPAC24B11.12c |||P-type ATPase |Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1402

 Score = 25.4 bits (53), Expect = 7.2
 Identities = 6/24 (25%), Positives = 15/24 (62%)
 Frame = -3

Query: 529  WSLSHFGKLIYHIFYFRVIWSYTI 458
            W  +   +++ + FY  V+W++T+
Sbjct: 1061 WDYNRVAEMVNNFFYKSVVWTFTL 1084


>SPAC1002.09c |dld1|dldh|dihydrolipoamide dehydrogenase
           Dld1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 511

 Score = 25.0 bits (52), Expect = 9.5
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 341 VCIVGAGPAGFYAAM 385
           +C++G GP G+ AA+
Sbjct: 48  LCVIGGGPGGYVAAI 62


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,631,428
Number of Sequences: 5004
Number of extensions: 53695
Number of successful extensions: 137
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 136
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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