BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_D03 (651 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_02_0435 + 10206569-10206730,10207126-10207230,10207897-102079... 81 8e-16 05_07_0059 + 27402365-27402733,27402848-27402982,27403070-274031... 54 1e-07 01_06_0276 - 28084746-28085003,28085103-28085357,28085531-280857... 52 4e-07 05_04_0299 - 19958776-19958858,19958883-19959012,19960131-199601... 32 0.46 10_08_0731 + 20161962-20163628,20163721-20163862,20164181-201644... 29 3.2 06_01_0782 - 5848381-5849394,5851143-5851255,5851337-5851440,585... 29 4.2 04_04_0214 - 23674270-23676858,23677574-23680843,23680941-236811... 29 4.2 08_02_0200 - 14179389-14180488,14180575-14180736,14180983-141813... 27 9.8 06_02_0181 - 12694304-12694398,12694512-12695547 27 9.8 >02_02_0435 + 10206569-10206730,10207126-10207230,10207897-10207986, 10208256-10208369,10208477-10208530,10208951-10209067, 10209530-10209639,10209752-10209825,10209921-10209982, 10210240-10210435,10210506-10210569,10210789-10210832, 10210974-10211116,10211521-10211751 Length = 521 Score = 81.0 bits (191), Expect = 8e-16 Identities = 51/134 (38%), Positives = 75/134 (55%), Gaps = 31/134 (23%) Frame = +2 Query: 341 VCIVGAGPAGFYAAMHLTKNIQ-CKIDLIEKLPVPFGLIRYGVAPDHPEVKNVINQFTKV 517 VC+VG+GPAGFY A + K + ++D+I++LP PFGL+R GVAPDHPE K+ +F + Sbjct: 39 VCVVGSGPAGFYTADKMLKGHEGAQVDIIDRLPTPFGLVRSGVAPDHPETKSKAIEFDFL 98 Query: 518 AQRPEVN-----FYGNVTLGK-------------------DITLNQ------LRQHYDAV 607 +R N ++ LG+ ++TL + LR+ YD V Sbjct: 99 KKRASYNLGRREYFDCFILGQIVVNQFSRVAANDRCQFYGNVTLGRDVSLSELRKTYDVV 158 Query: 608 LLTYGAEKDKTLGI 649 +L YGAE D++LGI Sbjct: 159 VLAYGAESDRSLGI 172 >05_07_0059 + 27402365-27402733,27402848-27402982,27403070-27403183, 27403297-27403449,27403544-27403644,27403945-27404041, 27404542-27404651,27404775-27404878,27405129-27405308, 27405398-27405741,27405841-27405905,27405981-27406450, 27406939-27407793,27408045-27408116,27408475-27408575, 27409069-27409170,27409295-27409456,27409665-27411230, 27411384-27411602,27413924-27414198,27414291-27414596, 27414727-27415012,27415085-27415087,27415162-27415416, 27415537-27415803 Length = 2236 Score = 53.6 bits (123), Expect = 1e-07 Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 2/106 (1%) Frame = +2 Query: 338 RVCIVGAGPAGFYAAMHLTKNIQCKIDLIEKLPVPFGLIRYGVAPDHPEVKNVINQFTKV 517 RV IVG+GPAG AA L K + + + E+ GL+ YGV + + ++ + ++ Sbjct: 1867 RVAIVGSGPAGLAAADQLNK-MGHFVTVFERADRIGGLMMYGVPNMKADKEGIVQRRVEL 1925 Query: 518 AQRPEVNFYGNVTLGKD--ITLNQLRQHYDAVLLTYGAEKDKTLGI 649 + V F N +G D ++ +LR DA++L GA K K L + Sbjct: 1926 MAKEGVQFIVNAHVGSDPLYSVEKLRSENDAIILACGATKPKALSL 1971 >01_06_0276 - 28084746-28085003,28085103-28085357,28085531-28085798, 28085948-28086253,28086369-28086643,28087034-28087252, 28087486-28089015,28089236-28089397,28089512-28089666, 28090195-28091064,28091363-28091832,28091917-28091981, 28092105-28092448,28092531-28092710,28092817-28092920, 28093053-28093162,28093648-28093744,28094138-28094238, 28094324-28094476,28094561-28094674,28094795-28094884, 28094960-28095307 Length = 2157 Score = 52.0 bits (119), Expect = 4e-07 Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 2/106 (1%) Frame = +2 Query: 338 RVCIVGAGPAGFYAAMHLTKNIQCKIDLIEKLPVPFGLIRYGVAPDHPEVKNVINQFTKV 517 +V I+G+GPAG AA L K + + + E+ GL+ YGV + ++ + + Sbjct: 1798 KVAIIGSGPAGLAAADQLNK-MGHFVTVFERADRIGGLMMYGVPNMKTDKIEIVQRRVNL 1856 Query: 518 AQRPEVNFYGNVTLGKD--ITLNQLRQHYDAVLLTYGAEKDKTLGI 649 + F N +G D ++ +LR DAV+L GA K + LGI Sbjct: 1857 MAEEGITFVVNANVGSDPLYSIERLRSENDAVILACGATKPRDLGI 1902 >05_04_0299 - 19958776-19958858,19958883-19959012,19960131-19960175, 19960252-19960370,19960450-19960543,19961824-19961985, 19962117-19962266,19962472-19962537,19962934-19962981, 19963654-19963866,19963953-19964078,19964155-19964232, 19964600-19964671,19965522-19965953,19966863-19966925, 19967497-19967898 Length = 760 Score = 31.9 bits (69), Expect = 0.46 Identities = 14/34 (41%), Positives = 25/34 (73%) Frame = +2 Query: 329 KIPRVCIVGAGPAGFYAAMHLTKNIQCKIDLIEK 430 K PRV +VG+GP+G +A++ L + + ++ LIE+ Sbjct: 237 KKPRVAVVGSGPSGLFASLVLGE-LGAEVTLIER 269 >10_08_0731 + 20161962-20163628,20163721-20163862,20164181-20164490, 20164566-20166466,20166557-20166650,20166953-20167440, 20167919-20168599,20168870-20168944,20170148-20170210, 20170588-20170633,20171373-20171420,20171484-20171557 Length = 1862 Score = 29.1 bits (62), Expect = 3.2 Identities = 11/20 (55%), Positives = 15/20 (75%) Frame = +2 Query: 338 RVCIVGAGPAGFYAAMHLTK 397 ++ +VGAGPAG AA HL + Sbjct: 741 KIIVVGAGPAGLTAARHLQR 760 >06_01_0782 - 5848381-5849394,5851143-5851255,5851337-5851440, 5851584-5851660,5851740-5852132,5852267-5852482, 5852826-5852923,5853503-5853637,5853745-5853811, 5853999-5854094,5854555-5854683 Length = 813 Score = 28.7 bits (61), Expect = 4.2 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = +2 Query: 335 PRVCIVGAGPAGFYAAMHL 391 PRVCI+G G G Y A+ L Sbjct: 45 PRVCILGGGFGGLYTALRL 63 >04_04_0214 - 23674270-23676858,23677574-23680843,23680941-23681119, 23681200-23681559,23681645-23682086,23682199-23682332, 23682479-23682680 Length = 2391 Score = 28.7 bits (61), Expect = 4.2 Identities = 16/38 (42%), Positives = 20/38 (52%) Frame = +2 Query: 338 RVCIVGAGPAGFYAAMHLTKNIQCKIDLIEKLPVPFGL 451 R+ IVGAGP+G AA L K + L EK G+ Sbjct: 23 RIGIVGAGPSGLSAAYALAKLGYRNVTLFEKCHTVSGM 60 >08_02_0200 - 14179389-14180488,14180575-14180736,14180983-14181383, 14182078-14182272,14182980-14183094,14183180-14183428, 14184032-14184093,14184335-14184435,14184701-14184815, 14185211-14185302,14187619-14187777 Length = 916 Score = 27.5 bits (58), Expect = 9.8 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = -3 Query: 529 WSLSHFGKLIYHIFYFRVIWSYTI 458 WSLS G L+ + F + WS+T+ Sbjct: 485 WSLSLVGALLCVVIMFLISWSFTV 508 >06_02_0181 - 12694304-12694398,12694512-12695547 Length = 376 Score = 27.5 bits (58), Expect = 9.8 Identities = 10/20 (50%), Positives = 15/20 (75%) Frame = +2 Query: 338 RVCIVGAGPAGFYAAMHLTK 397 RVCI+G+GPA AA++ + Sbjct: 49 RVCIIGSGPAAHTAAVYAAR 68 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,163,602 Number of Sequences: 37544 Number of extensions: 290890 Number of successful extensions: 534 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 517 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 531 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1620349964 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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