Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_D03
(651 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132865-4|CAB60604.1| 458|Caenorhabditis elegans Hypothetical ... 116 1e-26
Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical pr... 49 3e-06
Z71258-4|CAA95783.2| 423|Caenorhabditis elegans Hypothetical pr... 29 2.2
U88314-9|AAF99881.1| 408|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z66494-4|CAA91263.1| 599|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF043700-8|AAB97574.2| 374|Caenorhabditis elegans Hypothetical ... 28 5.0
Z81512-6|CAB04171.3| 455|Caenorhabditis elegans Hypothetical pr... 28 6.6
AC087079-18|AAK27867.2| 830|Caenorhabditis elegans Hypothetical... 28 6.6
AC087079-17|AAT81177.1| 837|Caenorhabditis elegans Hypothetical... 28 6.6
>AL132865-4|CAB60604.1| 458|Caenorhabditis elegans Hypothetical
protein Y62E10A.6 protein.
Length = 458
Score = 116 bits (280), Expect = 1e-26
Identities = 55/107 (51%), Positives = 73/107 (68%), Gaps = 2/107 (1%)
Frame = +2
Query: 335 PRVCIVGAGPAGFYAAMHLTKNIQCKIDLIEKLPVPFGLIRYGVAPDHPEVKNVINQFTK 514
PR+ IVG+GPAG +A L + +D+ E PVPFGL+RYGVAPDH EVKNVIN F
Sbjct: 26 PRLAIVGSGPAGMFACNGLLRKSNFSVDVFENSPVPFGLVRYGVAPDHQEVKNVINTFDA 85
Query: 515 VAQ--RPEVNFYGNVTLGKDITLNQLRQHYDAVLLTYGAEKDKTLGI 649
+ + R + + NV +G+DIT ++L + YDAVLL YG+ K +TL I
Sbjct: 86 MFEKNRERLKLFCNVNIGRDITFDELTRGYDAVLLAYGSYKTRTLDI 132
>Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical protein
W07E11.1 protein.
Length = 2207
Score = 48.8 bits (111), Expect = 3e-06
Identities = 29/104 (27%), Positives = 55/104 (52%)
Frame = +2
Query: 338 RVCIVGAGPAGFYAAMHLTKNIQCKIDLIEKLPVPFGLIRYGVAPDHPEVKNVINQFTKV 517
R+ I+G+GP+G AA L K + + + E+ GL+RYG+ P K V+++ +
Sbjct: 1848 RIAIIGSGPSGLGAAAQLVK-VGHTVVVYERKNRVGGLLRYGI-PTMKLDKFVVDRRVSL 1905
Query: 518 AQRPEVNFYGNVTLGKDITLNQLRQHYDAVLLTYGAEKDKTLGI 649
++ V F N +GK + + L + DA+++ G+ + L +
Sbjct: 1906 LEQEGVRFLTNTEIGKHVPADFLLKENDAIIVCTGSTTARDLNV 1949
>Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical protein
W07E11.1 protein.
Length = 2207
Score = 48.8 bits (111), Expect = 3e-06
Identities = 29/104 (27%), Positives = 55/104 (52%)
Frame = +2
Query: 338 RVCIVGAGPAGFYAAMHLTKNIQCKIDLIEKLPVPFGLIRYGVAPDHPEVKNVINQFTKV 517
R+ I+G+GP+G AA L K + + + E+ GL+RYG+ P K V+++ +
Sbjct: 1848 RIAIIGSGPSGLGAAAQLVK-VGHTVVVYERKNRVGGLLRYGI-PTMKLDKFVVDRRVSL 1905
Query: 518 AQRPEVNFYGNVTLGKDITLNQLRQHYDAVLLTYGAEKDKTLGI 649
++ V F N +GK + + L + DA+++ G+ + L +
Sbjct: 1906 LEQEGVRFLTNTEIGKHVPADFLLKENDAIIVCTGSTTARDLNV 1949
>Z71258-4|CAA95783.2| 423|Caenorhabditis elegans Hypothetical
protein C01H6.4 protein.
Length = 423
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 338 RVCIVGAGPAGFYAAMHLTKNIQCKIDLIEK 430
++CI+GAG AG +A H K ++D+ E+
Sbjct: 4 KICIIGAGAAGLVSAKHAIKQ-GYQVDIFEQ 33
>U88314-9|AAF99881.1| 408|Caenorhabditis elegans Hypothetical
protein C46H11.2 protein.
Length = 408
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +2
Query: 338 RVCIVGAGPAGFYAAMH-LTKNIQCKI 415
RVC++GAG AG AA H L + ++ ++
Sbjct: 4 RVCVIGAGAAGLAAAKHSLAQGLEVEV 30
>Z66494-4|CAA91263.1| 599|Caenorhabditis elegans Hypothetical
protein C34C6.4 protein.
Length = 599
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +2
Query: 308 YSANNYTKIPRVCIVGAGPAGFYAAMHLTKNIQCKIDLIEKLPV 439
+SA+ P IVGAG AG A LT++ ++ LIE PV
Sbjct: 29 FSADIAENKPTHIIVGAGSAGCVLANRLTEDPSNRVLLIEAGPV 72
>AF043700-8|AAB97574.2| 374|Caenorhabditis elegans Hypothetical
protein K09H9.1 protein.
Length = 374
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/68 (22%), Positives = 33/68 (48%)
Frame = -2
Query: 461 HILLIRRVPEVFLLNQSCIVCFS*DAWRHKSLQDQLQQYILEEFLCNYLLNKICSKFLNF 282
+I+L +PE+F +++C + D W +++Q +Q + + + +L C N
Sbjct: 279 NIILCDEIPEIFHSSENCKSDDTSDCWHLETIQPIPEQKANQFYGDDTILTGKCFCLKNL 338
Query: 281 RKSFCFKF 258
R + C +
Sbjct: 339 RLNSCINY 346
>Z81512-6|CAB04171.3| 455|Caenorhabditis elegans Hypothetical
protein F25C8.2 protein.
Length = 455
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +2
Query: 320 NYTKIPRVCIVGAGPAGFYAAMH 388
N +K+ +VCI+GAG AG +A+H
Sbjct: 3 NESKV-KVCIIGAGLAGLRSAIH 24
>AC087079-18|AAK27867.2| 830|Caenorhabditis elegans Hypothetical
protein Y37E3.17a protein.
Length = 830
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 326 TKIPRVCIVGAGPAGFYAAMHLTKNIQCKIDLIEK 430
TK C++G+G AG A HLTK + L+E+
Sbjct: 25 TKHVFACVLGSGVAGSSVAYHLTKRNIKDVLLLER 59
>AC087079-17|AAT81177.1| 837|Caenorhabditis elegans Hypothetical
protein Y37E3.17b protein.
Length = 837
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 326 TKIPRVCIVGAGPAGFYAAMHLTKNIQCKIDLIEK 430
TK C++G+G AG A HLTK + L+E+
Sbjct: 25 TKHVFACVLGSGVAGSSVAYHLTKRNIKDVLLLER 59
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,280,569
Number of Sequences: 27780
Number of extensions: 294190
Number of successful extensions: 568
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 565
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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