Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_D03
(651 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g32360.1 68417.m04607 NADP adrenodoxin-like ferredoxin reduct... 130 6e-31
At5g53460.1 68418.m06644 glutamate synthase [NADH], chloroplast,... 52 3e-07
At5g54770.1 68418.m06822 thiazole biosynthetic enzyme, chloropla... 32 0.38
At5g07800.1 68418.m00894 flavin-containing monooxygenase family ... 32 0.38
At5g08740.1 68418.m01038 pyridine nucleotide-disulphide oxidored... 30 1.5
At4g30720.1 68417.m04354 expressed protein hypothetical protein ... 29 2.0
At2g43400.1 68415.m05394 electron transfer flavoprotein-ubiquino... 29 2.0
At1g09720.1 68414.m01091 kinase interacting family protein simil... 29 2.0
At4g16310.1 68417.m02473 amine oxidase family protein / SWIRM do... 29 2.7
At5g61290.1 68418.m07691 flavin-containing monooxygenase family ... 28 4.7
At1g23700.1 68414.m02992 protein kinase family protein contains ... 27 8.2
>At4g32360.1 68417.m04607 NADP adrenodoxin-like ferredoxin reductase
identical to NADP adrenodoxin-like ferredoxin reductase
GI:28192433 from [Arabidopsis thaliana]
Length = 483
Score = 130 bits (315), Expect = 6e-31
Identities = 62/119 (52%), Positives = 85/119 (71%), Gaps = 1/119 (0%)
Frame = +2
Query: 296 LNRFYSANNYTKIPRVCIVGAGPAGFYAAMHLTKNIQ-CKIDLIEKLPVPFGLIRYGVAP 472
++R++S+ + + VCIVG+GPAGFY A + K + +D+I++LP PFGL+R GVAP
Sbjct: 10 VSRYFSSASSRPL-HVCIVGSGPAGFYTADKVLKAHEGAHVDIIDRLPTPFGLVRSGVAP 68
Query: 473 DHPEVKNVINQFTKVAQRPEVNFYGNVTLGKDITLNQLRQHYDAVLLTYGAEKDKTLGI 649
DHPE K INQF++VAQ +F GNV LG D++L++LR Y V+L YGAE DK LGI
Sbjct: 69 DHPETKIAINQFSRVAQHERCSFIGNVKLGSDLSLSELRDLYHVVVLAYGAESDKDLGI 127
>At5g53460.1 68418.m06644 glutamate synthase [NADH], chloroplast,
putative similar to SP|Q03460 Glutamate synthase [NADH],
chloroplast precursor (EC 1.4.1.14) (NADH- GOGAT)
{Medicago sativa}
Length = 2208
Score = 52.0 bits (119), Expect = 3e-07
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Frame = +2
Query: 338 RVCIVGAGPAGFYAAMHLTKNIQCKIDLIEKLPVPFGLIRYGVAPDHPEVKNVINQFTKV 517
+V I+G+GPAG AA L K + + + E+ GL+ YGV + +V+ + +
Sbjct: 1847 KVAIIGSGPAGLAAADQLNK-MGHLVTVYERSDRIGGLMMYGVPNMKTDKIDVVQRRVDL 1905
Query: 518 AQRPEVNFYGNVTLGKD--ITLNQLRQHYDAVLLTYGAEKDKTLGI 649
+ +NF N +GKD +L+ L++ DA++L G+ K + L +
Sbjct: 1906 MTKEGINFVVNANIGKDPSYSLDGLKEENDAIVLAVGSTKPRDLPV 1951
>At5g54770.1 68418.m06822 thiazole biosynthetic enzyme, chloroplast
(ARA6) (THI1) (THI4) identical to SP|Q38814 Thiazole
biosynthetic enzyme, chloroplast precursor (ARA6)
{Arabidopsis thaliana}
Length = 349
Score = 31.9 bits (69), Expect = 0.38
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +2
Query: 290 RTLNRFYSANNYTKIPR-VCIVGAGPAGFYAAMHLTKNIQCKIDLIEKLPVPFG 448
R + R Y + T V +VGAG AG AA ++KN ++ +IE+ P G
Sbjct: 68 REMTRRYMTDMITYAETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGG 121
>At5g07800.1 68418.m00894 flavin-containing monooxygenase family
protein / FMO family protein similar to
flavin-containing monooxygenase 2 (FMO2) from Homo
sapiens [GI:1834493]; contains Pfam profile: PF00743
Flavin-binding monooxygenase-like
Length = 460
Score = 31.9 bits (69), Expect = 0.38
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 305 FYSANNYTKIPRVCIVGAGPAGFYAAMHLTK 397
F S + ++ +VC++GAGPAG +A L K
Sbjct: 4 FTSEASRSRSKKVCVIGAGPAGLVSARELRK 34
>At5g08740.1 68418.m01038 pyridine nucleotide-disulphide
oxidoreductase family protein similar to DhnA
[Synechococcus sp. PCC 7942] GI:15620546; contains Pfam
profile PF00070: Pyridine nucleotide-disulphide
oxidoreductase
Length = 519
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 293 TLNRFYSANNYTKIPRVCIVGAGPAGFYAAMHL 391
T R YS + K PRVCI+G G G Y A+ L
Sbjct: 68 TAPRTYSWPD-NKRPRVCILGGGFGGLYTALRL 99
>At4g30720.1 68417.m04354 expressed protein hypothetical protein -
Synechocystis sp. (strain PCC 6803),PIR2:S76076
Length = 749
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +2
Query: 335 PRVCIVGAGPAGFYAAMHLTKNIQCKIDLIEK 430
P++ +VG GP+G +AA+ L + + LIE+
Sbjct: 267 PKIAVVGGGPSGLFAALVLAE-FGADVTLIER 297
>At2g43400.1 68415.m05394 electron transfer flavoprotein-ubiquinone
oxidoreductase family protein contains Pfam profile:
PF05187 Electron transfer flavoprotein-ubiquinone
oxidoreductase
Length = 633
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Frame = +2
Query: 341 VCIVGAGPAGFYAAMHL-----TKNIQCKIDLIEK 430
V IVGAGPAG AA+ L KNI + ++EK
Sbjct: 102 VLIVGAGPAGLSAAIRLKQLSQEKNIDLSVCVVEK 136
>At1g09720.1 68414.m01091 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 928
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +1
Query: 322 LHKNSSSMYCWSWSCRLLCRHASYEKHTMQD*FNRKTSGTLRI 450
L + +S+ Y W W+ + + + + +H +QD K TL+I
Sbjct: 2 LQRAASNAYSWWWASHIRTKQSKWLEHNLQD-MEEKVKYTLKI 43
>At4g16310.1 68417.m02473 amine oxidase family protein / SWIRM
domain-containing protein low similarity to polyamine
oxidase isoform-1 [Homo sapiens] GI:14860862; contains
Pfam profiles PF01593: amine oxidase flavin-containing,
PF04433: SWIRM domain
Length = 1265
Score = 29.1 bits (62), Expect = 2.7
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 338 RVCIVGAGPAGFYAAMHLTK 397
+V ++GAGPAG AA HL +
Sbjct: 619 KVIVIGAGPAGLTAARHLQR 638
>At5g61290.1 68418.m07691 flavin-containing monooxygenase family
protein / FMO family protein low similarity to FMO3 from
Homo sapiens [SP|P31513]; contains Pfam profile: PF00743
Flavin-binding monooxygenase-like; supported by
full-length cDNA Ceres:14492
Length = 461
Score = 28.3 bits (60), Expect = 4.7
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +2
Query: 341 VCIVGAGPAGFYAAMHLTK 397
VC++GAGP+G +A L K
Sbjct: 16 VCVIGAGPSGLVSARELKK 34
>At1g23700.1 68414.m02992 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 473
Score = 27.5 bits (58), Expect = 8.2
Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Frame = -2
Query: 500 LSHFLLQGDLELHHILLIRRVPEVFLLNQSCIVCFS*DAWRHKSLQDQLQQYILEEF--L 327
L + L+Q D++ ++ + P + + SC ++ +Q+ +Q+ L L
Sbjct: 344 LQNILIQNDIQRENVEALLTEPAILVNPVSCDTAQVLPIVQNILIQNDIQRKRLIGLMQL 403
Query: 326 CNYLLNKICSKFLNFRKSFCFKF 258
C+ K L F S C+KF
Sbjct: 404 CDPTAGKFAVLSLEFASSLCYKF 426
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,066,988
Number of Sequences: 28952
Number of extensions: 258602
Number of successful extensions: 516
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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