BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_C23 (591 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_P26373 Cluster: 60S ribosomal protein L13; n=111; Eukar... 104 2e-21 UniRef50_Q4PAD9 Cluster: 60S ribosomal protein L13; n=2; Basidio... 86 7e-16 UniRef50_UPI0000D563A2 Cluster: PREDICTED: similar to 60S riboso... 83 5e-15 UniRef50_Q9FF90 Cluster: 60S ribosomal protein L13-3; n=27; Viri... 83 5e-15 UniRef50_A1D9H8 Cluster: 60S ribosomal protein L13; n=26; Fungi/... 82 1e-14 UniRef50_O59931 Cluster: 60S ribosomal protein L13; n=5; Ascomyc... 80 3e-14 UniRef50_A2EYN3 Cluster: 60S ribosomal protein L13; n=6; Trichom... 79 6e-14 UniRef50_A0CPH3 Cluster: 60S ribosomal protein L13; n=9; Oligohy... 79 8e-14 UniRef50_UPI0000DC2213 Cluster: UPI0000DC2213 related cluster; n... 75 1e-12 UniRef50_A3FQ93 Cluster: 60S ribosomal protein L13, putative; n=... 74 2e-12 UniRef50_Q57V55 Cluster: 60S ribosomal protein L13, putative; n=... 74 3e-12 UniRef50_O15616 Cluster: 60S ribosomal protein L13; n=3; Entamoe... 70 4e-11 UniRef50_Q4X4D3 Cluster: 60S ribosomal protein L13, putative; n=... 65 1e-09 UniRef50_Q4N9B5 Cluster: 60S ribosomal protein L13e, putative; n... 64 3e-09 UniRef50_Q8SSC1 Cluster: 60S RIBOSOMAL PROTEIN L13; n=1; Encepha... 56 5e-07 UniRef50_Q9AW85 Cluster: 60S ribosomal protein L13; n=1; Guillar... 52 8e-06 UniRef50_Q018B3 Cluster: Chromosome 05 contig 1, DNA sequence; n... 41 0.019 UniRef50_Q6LAB9 Cluster: 60S ribosomal protein L13; n=1; Arabido... 40 0.044 UniRef50_A2YRI3 Cluster: 60S ribosomal protein L13; n=2; Oryza s... 39 0.10 UniRef50_O14377 Cluster: Putative uncharacterized protein; n=1; ... 38 0.13 UniRef50_Q8ZWS7 Cluster: 60S ribosomal protein L13; n=4; Pyrobac... 36 0.71 UniRef50_UPI00005A0D5A Cluster: PREDICTED: similar to ribosomal ... 35 1.2 UniRef50_Q9YEN9 Cluster: 50S ribosomal protein L13e; n=3; Desulf... 33 6.6 >UniRef50_P26373 Cluster: 60S ribosomal protein L13; n=111; Eukaryota|Rep: 60S ribosomal protein L13 - Homo sapiens (Human) Length = 211 Score = 104 bits (249), Expect = 2e-21 Identities = 48/86 (55%), Positives = 58/86 (67%) Frame = +1 Query: 118 RHWQRFVKTWFNQPARRYRXKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRG 297 + WQR V TWFNQPAR+ R ++ +RPIVRCPTVRYHTKVRAGRG Sbjct: 16 KDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRG 75 Query: 298 FTLREIRAAGLNPVFARTIGIAVXPR 375 F+L E+R AG++ ARTIGI+V PR Sbjct: 76 FSLEELRVAGIHKKVARTIGISVDPR 101 Score = 77.8 bits (183), Expect = 2e-13 Identities = 42/74 (56%), Positives = 50/74 (67%), Gaps = 1/74 (1%) Frame = +2 Query: 371 PVXRNKSVESLQINVQRIKEYXARLILFP-KGKKVLKGEANEXXRKLATQLRGPLMPVQQ 547 P RNKS ESLQ NVQR+KEY ++LILFP K KG+++ KLATQL GP+MPV+ Sbjct: 100 PRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRN 159 Query: 548 PAPKSVARPITEXE 589 K AR ITE E Sbjct: 160 VYKKEKARVITEEE 173 >UniRef50_Q4PAD9 Cluster: 60S ribosomal protein L13; n=2; Basidiomycota|Rep: 60S ribosomal protein L13 - Ustilago maydis (Smut fungus) Length = 209 Score = 85.8 bits (203), Expect = 7e-16 Identities = 39/86 (45%), Positives = 54/86 (62%) Frame = +1 Query: 118 RHWQRFVKTWFNQPARRYRXKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRG 297 + WQR VK WF+QP + R ++ LRP VRCPT+RY+TK+R+GRG Sbjct: 16 KDWQRRVKVWFDQPGAKKR-RRTAREAKAAKLGLRPVQLLRPAVRCPTLRYNTKIRSGRG 74 Query: 298 FTLREIRAAGLNPVFARTIGIAVXPR 375 FT+ E++AAGL +AR++GI V R Sbjct: 75 FTIEEVKAAGLGKKYARSVGIPVDHR 100 Score = 45.2 bits (102), Expect = 0.001 Identities = 26/70 (37%), Positives = 37/70 (52%) Frame = +2 Query: 380 RNKSVESLQINVQRIKEYXARLILFPKGKKVLKGEANEXXRKLATQLRGPLMPVQQPAPK 559 RNKS ESL++NV+RIK Y ARL++ PK K K + + A + ++P+ Sbjct: 102 RNKSEESLKLNVERIKAYQARLVVIPKLTKKNKDKKVDLSNVEAVRQVQSVLPLPAGTEA 161 Query: 560 SVARPITEXE 589 R IT E Sbjct: 162 EKPRAITSEE 171 >UniRef50_UPI0000D563A2 Cluster: PREDICTED: similar to 60S ribosomal protein L13; n=1; Tribolium castaneum|Rep: PREDICTED: similar to 60S ribosomal protein L13 - Tribolium castaneum Length = 198 Score = 83.0 bits (196), Expect = 5e-15 Identities = 38/86 (44%), Positives = 53/86 (61%) Frame = +1 Query: 118 RHWQRFVKTWFNQPARRYRXKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRG 297 + WQ+ VK WFNQP ++ R K LRP+V CP+ RY +KVRAGRG Sbjct: 15 KKWQQKVKLWFNQPMKKLRRKALR-AKKSRQLAPKPTELLRPLVHCPSERYKSKVRAGRG 73 Query: 298 FTLREIRAAGLNPVFARTIGIAVXPR 375 FT +E++ AG++ +AR+ G+AV PR Sbjct: 74 FTFQELKQAGMSDKYARSFGVAVDPR 99 Score = 38.3 bits (85), Expect = 0.13 Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 1/37 (2%) Frame = +2 Query: 371 PVXRNKSVESLQINVQRIKEYXARLILFPKGK-KVLK 478 P RN+ ES+ N+QR+ EY +RLI P K KVLK Sbjct: 98 PRRRNRCTESIAANIQRLIEYKSRLIFLPDSKNKVLK 134 >UniRef50_Q9FF90 Cluster: 60S ribosomal protein L13-3; n=27; Viridiplantae|Rep: 60S ribosomal protein L13-3 - Arabidopsis thaliana (Mouse-ear cress) Length = 206 Score = 83.0 bits (196), Expect = 5e-15 Identities = 39/86 (45%), Positives = 52/86 (60%) Frame = +1 Query: 118 RHWQRFVKTWFNQPARRYRXKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRG 297 +HWQ +VKTWFNQPAR+ R + LRP+V T++Y+ KVRAG+G Sbjct: 14 KHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTSGPLRPVVHGQTLKYNMKVRAGKG 73 Query: 298 FTLREIRAAGLNPVFARTIGIAVXPR 375 FTL E++ AG+ A TIGI+V R Sbjct: 74 FTLEELKVAGIPKKLAPTIGISVDHR 99 Score = 50.8 bits (116), Expect = 2e-05 Identities = 23/55 (41%), Positives = 38/55 (69%), Gaps = 1/55 (1%) Frame = +2 Query: 380 RNKSVESLQINVQRIKEYXARLILFP-KGKKVLKGEANEXXRKLATQLRGPLMPV 541 +N+S+E LQ NVQR+K Y A+L++FP + ++V G++ ATQ++G MP+ Sbjct: 101 KNRSLEGLQSNVQRLKTYKAKLVVFPRRSRQVKAGDSTPEELANATQVQGDYMPI 155 >UniRef50_A1D9H8 Cluster: 60S ribosomal protein L13; n=26; Fungi/Metazoa group|Rep: 60S ribosomal protein L13 - Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181)) Length = 243 Score = 81.8 bits (193), Expect = 1e-14 Identities = 38/86 (44%), Positives = 54/86 (62%) Frame = +1 Query: 118 RHWQRFVKTWFNQPARRYRXKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRG 297 + WQR V+ F+QP R++R ++ + LRP+VRCPTV+Y+ +VR GRG Sbjct: 33 KDWQRRVRVHFDQPGRKHRRREARLAKAAAVAPRPVDK-LRPVVRCPTVKYNRRVRVGRG 91 Query: 298 FTLREIRAAGLNPVFARTIGIAVXPR 375 FTL E++ AG+ ART+GIAV R Sbjct: 92 FTLAELKEAGIPKKLARTVGIAVDHR 117 Score = 36.7 bits (81), Expect = 0.41 Identities = 17/26 (65%), Positives = 20/26 (76%) Frame = +2 Query: 383 NKSVESLQINVQRIKEYXARLILFPK 460 N S ESL NV R+K+Y ARLILFP+ Sbjct: 120 NYSKESLVANVARLKDYKARLILFPR 145 >UniRef50_O59931 Cluster: 60S ribosomal protein L13; n=5; Ascomycota|Rep: 60S ribosomal protein L13 - Candida albicans (Yeast) Length = 202 Score = 80.2 bits (189), Expect = 3e-14 Identities = 38/86 (44%), Positives = 54/86 (62%) Frame = +1 Query: 118 RHWQRFVKTWFNQPARRYRXKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRG 297 +HWQ V+ F+Q ++ +Q+ + LRP+VR PTV+Y+ KVRAGRG Sbjct: 16 KHWQERVRVHFDQAGKKASRRQSRLRKAAKIAPRPIDA-LRPVVRAPTVKYNRKVRAGRG 74 Query: 298 FTLREIRAAGLNPVFARTIGIAVXPR 375 FTL E++A G+ P +ARTIGI+V R Sbjct: 75 FTLAELKAVGIAPKYARTIGISVDHR 100 Score = 41.5 bits (93), Expect = 0.014 Identities = 24/66 (36%), Positives = 37/66 (56%) Frame = +2 Query: 380 RNKSVESLQINVQRIKEYXARLILFPKGKKVLKGEANEXXRKLATQLRGPLMPVQQPAPK 559 +NKS E+ NV R++EY ++L++F K K + + E AT PV+QPAP+ Sbjct: 102 QNKSQETFDANVARLQEYKSKLVIFDKKTKASEVASFEQVDVSAT------FPVEQPAPE 155 Query: 560 SVARPI 577 S R + Sbjct: 156 SGLRAV 161 >UniRef50_A2EYN3 Cluster: 60S ribosomal protein L13; n=6; Trichomonas vaginalis G3|Rep: 60S ribosomal protein L13 - Trichomonas vaginalis G3 Length = 210 Score = 79.4 bits (187), Expect = 6e-14 Identities = 40/86 (46%), Positives = 49/86 (56%) Frame = +1 Query: 118 RHWQRFVKTWFNQPARRYRXKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRG 297 ++W VKT+F+ PAR R + LRPIVRCPTVRY+ K R GRG Sbjct: 36 KYWYHRVKTYFDDPARAQRRRNARNLRAKKIAPRPAEGPLRPIVRCPTVRYNMKTRLGRG 95 Query: 298 FTLREIRAAGLNPVFARTIGIAVXPR 375 FT +E+ AAG +P AR GIAV R Sbjct: 96 FTPKELVAAGFDPALARFQGIAVDAR 121 >UniRef50_A0CPH3 Cluster: 60S ribosomal protein L13; n=9; Oligohymenophorea|Rep: 60S ribosomal protein L13 - Paramecium tetraurelia Length = 208 Score = 79.0 bits (186), Expect = 8e-14 Identities = 38/86 (44%), Positives = 54/86 (62%) Frame = +1 Query: 118 RHWQRFVKTWFNQPARRYRXKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRG 297 +HW RFVKT++NQPA + R +Q LRP+VR T++Y++ + GRG Sbjct: 14 KHWTRFVKTFYNQPAAK-RRRQLRRRAQALSASPRPVELLRPVVRGQTIKYNSVQKLGRG 72 Query: 298 FTLREIRAAGLNPVFARTIGIAVXPR 375 F+L E++ AGLN FART+GI+V R Sbjct: 73 FSLIELKEAGLNAAFARTVGISVDHR 98 Score = 35.5 bits (78), Expect = 0.94 Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 5/65 (7%) Frame = +2 Query: 380 RNKSVESLQINVQRIKEYXARLILFPK--GKK---VLKGEANEXXRKLATQLRGPLMPVQ 544 RN + E L NV+R+K Y ++L+L+P+ GK V+K NE Q P + Sbjct: 100 RNLNQEELNNNVKRLKAYLSKLVLYPRVAGKPKNGVVKDSTNEVVAHPVAQNTNPEVLTF 159 Query: 545 QPAPK 559 Q PK Sbjct: 160 QRTPK 164 >UniRef50_UPI0000DC2213 Cluster: UPI0000DC2213 related cluster; n=1; Rattus norvegicus|Rep: UPI0000DC2213 UniRef100 entry - Rattus norvegicus Length = 173 Score = 74.9 bits (176), Expect = 1e-12 Identities = 33/47 (70%), Positives = 39/47 (82%) Frame = +1 Query: 235 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVXPR 375 +RPIVRCPTVRYHTKVR GRGF+L EIR AG++ ARTI I+V P+ Sbjct: 13 IRPIVRCPTVRYHTKVRGGRGFSLEEIRLAGIHKKMARTIDISVDPK 59 >UniRef50_A3FQ93 Cluster: 60S ribosomal protein L13, putative; n=2; Cryptosporidium|Rep: 60S ribosomal protein L13, putative - Cryptosporidium parvum Iowa II Length = 207 Score = 74.1 bits (174), Expect = 2e-12 Identities = 37/88 (42%), Positives = 52/88 (59%) Frame = +1 Query: 118 RHWQRFVKTWFNQPARRYRXKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRG 297 ++++R++KTW+NQP R+ + ++ LRPIV PT RY+ K R GRG Sbjct: 14 KNYKRWIKTWYNQPGRK-QSRRIARQKAVAEAGFRPVGMLRPIVHPPTQRYNMKTRLGRG 72 Query: 298 FTLREIRAAGLNPVFARTIGIAVXPRXT 381 FTL E+ A G+N A +IGIAV R T Sbjct: 73 FTLEELSACGINKKAAMSIGIAVDHRRT 100 Score = 34.3 bits (75), Expect = 2.2 Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%) Frame = +2 Query: 389 SVESLQINVQRIKEYXARLILFP-KGKKVLKGEA 487 S E+ QINV R+K+Y ++L P KGKK KG A Sbjct: 103 SEETFQINVDRLKKYINGIVLQPRKGKKTKKGFA 136 >UniRef50_Q57V55 Cluster: 60S ribosomal protein L13, putative; n=7; Trypanosomatidae|Rep: 60S ribosomal protein L13, putative - Trypanosoma brucei Length = 229 Score = 73.7 bits (173), Expect = 3e-12 Identities = 38/80 (47%), Positives = 50/80 (62%) Frame = +1 Query: 136 VKTWFNQPARRYRXKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFTLREI 315 VK +FNQPA++ R ++ + LRP V CPTVRY+ K R GRGF+L E+ Sbjct: 38 VKVFFNQPAQKQRRRRLRLLKAKKIFPRPLKA-LRPQVNCPTVRYNMKRRLGRGFSLEEL 96 Query: 316 RAAGLNPVFARTIGIAVXPR 375 +AAG+ P +ARTIGI V R Sbjct: 97 KAAGVKPRYARTIGIRVDRR 116 Score = 50.0 bits (114), Expect = 4e-05 Identities = 26/49 (53%), Positives = 33/49 (67%), Gaps = 1/49 (2%) Frame = +2 Query: 380 RNKSVESLQINVQRIKEYXARLILFP-KGKKVLKGEANEXXRKLATQLR 523 +NKS E + INVQR+K Y ++L+LFP KK KG+A E K ATQ R Sbjct: 118 KNKSEEGMNINVQRLKTYMSKLVLFPLNRKKPQKGDATEEEVKAATQDR 166 >UniRef50_O15616 Cluster: 60S ribosomal protein L13; n=3; Entamoeba histolytica|Rep: 60S ribosomal protein L13 - Entamoeba histolytica Length = 138 Score = 70.1 bits (164), Expect = 4e-11 Identities = 35/86 (40%), Positives = 48/86 (55%) Frame = +1 Query: 118 RHWQRFVKTWFNQPARRYRXKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRG 297 + W+ V TW QP R+ R Q + L+P V C R++ K+R GRG Sbjct: 14 KDWRSKVHTWVQQPFRKIRRHQTRVEKAKSVFPATIKS-LKPSVHCMNQRFNYKLRLGRG 72 Query: 298 FTLREIRAAGLNPVFARTIGIAVXPR 375 F+L+E+RAA ++ ARTIGIAV PR Sbjct: 73 FSLKELRAAKIDKNLARTIGIAVDPR 98 >UniRef50_Q4X4D3 Cluster: 60S ribosomal protein L13, putative; n=5; Plasmodium|Rep: 60S ribosomal protein L13, putative - Plasmodium chabaudi Length = 215 Score = 64.9 bits (151), Expect = 1e-09 Identities = 34/84 (40%), Positives = 46/84 (54%) Frame = +1 Query: 124 WQRFVKTWFNQPARRYRXKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFT 303 WQR+V+ FN+ +R + ++ L P+V CPT RY+ K R G+GFT Sbjct: 17 WQRYVRVDFNKNIKR-KQRRLLREKRRKQNGGTPIEKLHPVVHCPTQRYNYKTRLGKGFT 75 Query: 304 LREIRAAGLNPVFARTIGIAVXPR 375 L EI+A L P AR+IGI V R Sbjct: 76 LEEIKAVKLTPSAARSIGIIVDKR 99 >UniRef50_Q4N9B5 Cluster: 60S ribosomal protein L13e, putative; n=4; Piroplasmida|Rep: 60S ribosomal protein L13e, putative - Theileria parva Length = 205 Score = 63.7 bits (148), Expect = 3e-09 Identities = 37/117 (31%), Positives = 58/117 (49%) Frame = +1 Query: 130 RFVKTWFNQPARRYRXKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFTLR 309 RFVK NQ ++ R ++ LRP+V P+ RY+ K+R GRGFTL+ Sbjct: 19 RFVKPVLNQAGKKKR-RRLARQRKAAASGLTPTGYLRPLVHMPSRRYNYKLRFGRGFTLQ 77 Query: 310 EIRAAGLNPVFARTIGIAVXPRXTQQVC*IIANQCSKNKGIXSASYTVPERQKGAEG 480 E++ AGL AR++G+AV R T + + ++ K S P ++ +G Sbjct: 78 ELKVAGLGKKVARSVGVAVDHRRTNKCAESLNLNVNRLKTYLSKLVLFPRKKHAKKG 134 Score = 45.6 bits (103), Expect = 9e-04 Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 9/78 (11%) Frame = +2 Query: 383 NKSVESLQINVQRIKEYXARLILFPKGKKVLKGEA-------NEXXRKLA--TQLRGPLM 535 NK ESL +NV R+K Y ++L+LFP+ K KG A E R LA Q +M Sbjct: 102 NKCAESLNLNVNRLKTYLSKLVLFPRKKHAKKGFAGLPSDTPREKLRTLALTKQSVKKVM 161 Query: 536 PVQQPAPKSVARPITEXE 589 PV Q K R +TE + Sbjct: 162 PVVQEFVKEPPREVTEKD 179 >UniRef50_Q8SSC1 Cluster: 60S RIBOSOMAL PROTEIN L13; n=1; Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L13 - Encephalitozoon cuniculi Length = 163 Score = 56.4 bits (130), Expect = 5e-07 Identities = 27/47 (57%), Positives = 32/47 (68%) Frame = +1 Query: 235 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVXPR 375 LRPIVRCPT++Y+ R GRGFT E AGL+ AR +GIAV R Sbjct: 51 LRPIVRCPTIKYNRNERLGRGFTAAECEKAGLDYRHARRLGIAVDLR 97 >UniRef50_Q9AW85 Cluster: 60S ribosomal protein L13; n=1; Guillardia theta|Rep: 60S ribosomal protein L13 - Guillardia theta (Cryptomonas phi) Length = 127 Score = 52.4 bits (120), Expect = 8e-06 Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 1/87 (1%) Frame = +1 Query: 118 RHWQRFVKTWFNQPARRY-RXKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGR 294 + W+ V T FNQP + R K L+P+V+CPT ++TK++ GR Sbjct: 14 KKWKNLVITNFNQPILKIKRRKIRKNKKKNFLKKAIFYKKLKPLVKCPTRMHNTKIKLGR 73 Query: 295 GFTLREIRAAGLNPVFARTIGIAVXPR 375 GF+++EI+ + + A + GI++ R Sbjct: 74 GFSIQEIKKSMIKLKTATSYGISIDKR 100 >UniRef50_Q018B3 Cluster: Chromosome 05 contig 1, DNA sequence; n=1; Ostreococcus tauri|Rep: Chromosome 05 contig 1, DNA sequence - Ostreococcus tauri Length = 527 Score = 41.1 bits (92), Expect = 0.019 Identities = 23/46 (50%), Positives = 24/46 (52%) Frame = -2 Query: 350 VRANTGFNPAALISRRVNPLPARTLVWYRTVGHRTIGRNGPAAGRG 213 VRA T S V P P R L YR VG TIGR+ PA GRG Sbjct: 398 VRARTMAITRTFNSSSVKPRPRRVLKLYRCVGGCTIGRSAPATGRG 443 >UniRef50_Q6LAB9 Cluster: 60S ribosomal protein L13; n=1; Arabidopsis thaliana|Rep: 60S ribosomal protein L13 - Arabidopsis thaliana (Mouse-ear cress) Length = 87 Score = 39.9 bits (89), Expect = 0.044 Identities = 16/32 (50%), Positives = 24/32 (75%) Frame = +1 Query: 235 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGL 330 LRP+V T++Y+ KV +GFTL E++AAG+ Sbjct: 52 LRPVVHGQTLKYNMKVSTXKGFTLEELKAAGI 83 >UniRef50_A2YRI3 Cluster: 60S ribosomal protein L13; n=2; Oryza sativa|Rep: 60S ribosomal protein L13 - Oryza sativa subsp. indica (Rice) Length = 138 Score = 38.7 bits (86), Expect = 0.10 Identities = 15/26 (57%), Positives = 21/26 (80%) Frame = +1 Query: 241 PIVRCPTVRYHTKVRAGRGFTLREIR 318 PIV+C T++Y+ K RAGRGF L E++ Sbjct: 47 PIVQCQTLKYNMKSRAGRGFILEELK 72 >UniRef50_O14377 Cluster: Putative uncharacterized protein; n=1; Schizosaccharomyces pombe|Rep: Putative uncharacterized protein - Schizosaccharomyces pombe (Fission yeast) Length = 70 Score = 38.3 bits (85), Expect = 0.13 Identities = 13/19 (68%), Positives = 16/19 (84%) Frame = +1 Query: 118 RHWQRFVKTWFNQPARRYR 174 + WQR+VKTWFNQP R+ R Sbjct: 19 KDWQRYVKTWFNQPGRKLR 37 >UniRef50_Q8ZWS7 Cluster: 60S ribosomal protein L13; n=4; Pyrobaculum|Rep: 60S ribosomal protein L13 - Pyrobaculum aerophilum Length = 159 Score = 35.9 bits (79), Expect = 0.71 Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 3/49 (6%) Frame = +1 Query: 238 RPIVRCPTVRYH---TKVRAGRGFTLREIRAAGLNPVFARTIGIAVXPR 375 +P+V+ P H K + GRGF++ E+RA GL+ AR +GI V R Sbjct: 6 KPLVKTPAKITHGGVVKWKYGRGFSIGELRALGLSVDQARLLGIPVDER 54 >UniRef50_UPI00005A0D5A Cluster: PREDICTED: similar to ribosomal protein L13 isoform 4; n=1; Canis lupus familiaris|Rep: PREDICTED: similar to ribosomal protein L13 isoform 4 - Canis familiaris Length = 102 Score = 35.1 bits (77), Expect = 1.2 Identities = 13/19 (68%), Positives = 15/19 (78%) Frame = +1 Query: 118 RHWQRFVKTWFNQPARRYR 174 + WQR V TWFNQPAR+ R Sbjct: 16 KDWQRRVATWFNQPARKIR 34 >UniRef50_Q9YEN9 Cluster: 50S ribosomal protein L13e; n=3; Desulfurococcales|Rep: 50S ribosomal protein L13e - Aeropyrum pernix Length = 80 Score = 32.7 bits (71), Expect = 6.6 Identities = 16/32 (50%), Positives = 21/32 (65%) Frame = +1 Query: 280 VRAGRGFTLREIRAAGLNPVFARTIGIAVXPR 375 VR GRGF+L E+ AGL+ AR +G+ V R Sbjct: 23 VRRGRGFSLGELAEAGLDAKKARKLGLHVDTR 54 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 536,903,031 Number of Sequences: 1657284 Number of extensions: 10066342 Number of successful extensions: 22101 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 21490 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 22076 length of database: 575,637,011 effective HSP length: 97 effective length of database: 414,880,463 effective search space used: 41073165837 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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