BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_C23
(591 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF281078-2|AAF82132.1| 755|Anopheles gambiae vitellogenin 2 pro... 25 1.4
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 25 1.4
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 24 4.2
L76038-1|AAC27383.1| 683|Anopheles gambiae prophenoloxidase pro... 23 7.4
AF031626-1|AAD01936.1| 683|Anopheles gambiae prophenoloxidase p... 23 7.4
AY462096-1|AAS21248.1| 603|Anopheles gambiae transposase protein. 23 9.8
>AF281078-2|AAF82132.1| 755|Anopheles gambiae vitellogenin 2
protein.
Length = 755
Score = 25.4 bits (53), Expect = 1.4
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = -1
Query: 480 PFSTFLPFGNSIRR-AXYSFIL*TLICNDSTDLLRXTGXYSNSNRSGKYWVQSCGPNFTK 304
PFS+ PFG + A F + + N ++L+ + G Y ++S F +
Sbjct: 120 PFSS-KPFGIYYNKGAVKGFYVEKTVPNHEVNMLKGWVSQLQLDTQGAYVIKSEFNQFPE 178
Query: 303 SESSTGAYFSMVPN 262
+ + TG Y +M P+
Sbjct: 179 NNTLTGVYKTMEPS 192
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
protein.
Length = 2051
Score = 25.4 bits (53), Expect = 1.4
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = -1
Query: 480 PFSTFLPFGNSIRR-AXYSFIL*TLICNDSTDLLRXTGXYSNSNRSGKYWVQSCGPNFTK 304
PFS+ PFG + A F + + N ++L+ + G Y ++S F +
Sbjct: 120 PFSS-KPFGIYYNKGAVKGFYVEKTVPNHEVNMLKGWVSQLQLDTQGAYVIKSEFNQFPE 178
Query: 303 SESSTGAYFSMVPN 262
+ + TG Y +M P+
Sbjct: 179 NNTLTGVYKTMEPS 192
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 23.8 bits (49), Expect = 4.2
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 78 GKGNNMIPNGHFHKALA 128
G G + PN +FHK+LA
Sbjct: 497 GAGGLLDPNSNFHKSLA 513
>L76038-1|AAC27383.1| 683|Anopheles gambiae prophenoloxidase
protein.
Length = 683
Score = 23.0 bits (47), Expect = 7.4
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +3
Query: 42 FSLPW*NSDVKMGKGNNMIPNGH 110
F W SDV + +G + +P G+
Sbjct: 448 FQTFWQQSDVDLSRGMDFVPRGN 470
>AF031626-1|AAD01936.1| 683|Anopheles gambiae prophenoloxidase
protein.
Length = 683
Score = 23.0 bits (47), Expect = 7.4
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +3
Query: 42 FSLPW*NSDVKMGKGNNMIPNGH 110
F W SDV + +G + +P G+
Sbjct: 448 FQTFWQQSDVDLSRGMDFVPRGN 470
>AY462096-1|AAS21248.1| 603|Anopheles gambiae transposase protein.
Length = 603
Score = 22.6 bits (46), Expect = 9.8
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +2
Query: 392 VESLQ--INVQRIKEYXAR-LILFPKGKKVLKGEANEXXRKLATQLRGPLMPVQQPA 553
+E LQ + + R E + +IL P+ K++ + E + + + L+P+Q+PA
Sbjct: 427 IEGLQNKLKIYRSNEQILKSMILDPRIKQLGFQDDVEKFKNICESIISELLPLQKPA 483
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 560,039
Number of Sequences: 2352
Number of extensions: 10425
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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