Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_C17
         (464 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_06_0186 + 11595041-11595182,11596442-11596473,11596628-115967...    77   9e-15
10_06_0185 + 11592108-11592265,11592585-11592685,11593917-115939...    33   0.086
06_03_0980 + 26520832-26520922,26521021-26521409,26521612-265219...    27   9.8  
02_01_0564 - 4136114-4136566,4136977-4137047,4137197-4137275,413...    27   9.8  

>10_06_0186 +
           11595041-11595182,11596442-11596473,11596628-11596722,
           11596841-11596925
          Length = 117

 Score = 76.6 bits (180), Expect = 9e-15
 Identities = 34/67 (50%), Positives = 48/67 (71%)
 Frame = +3

Query: 249 NSIPGITSIYEWKNEINEXKXTLLMIKTRTSQVDKLTEYVRSNHPYEVCEVISVPIKNGN 428
           NS  GI S+Y W+ ++      LL+IKTR S +D LTE+V++NH Y+V EVI++PIK GN
Sbjct: 44  NSGNGIESVYWWEGKVQTDAEELLIIKTRESLLDALTEHVKANHEYDVPEVIALPIKGGN 103

Query: 429 PPYLKWI 449
             YL+W+
Sbjct: 104 LKYLEWL 110


>10_06_0185 +
           11592108-11592265,11592585-11592685,11593917-11593979,
           11594407-11594426
          Length = 113

 Score = 33.5 bits (73), Expect = 0.086
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 183 PNDEVGRTIGHGLVKNKLAACVNSIP 260
           PN E G+ +   ++  KLAACVN +P
Sbjct: 82  PNKEAGKRLAGSIISEKLAACVNIVP 107


>06_03_0980 +
           26520832-26520922,26521021-26521409,26521612-26521927,
           26522869-26523769,26524103-26524184
          Length = 592

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 384 YEVCEVISVPIKNGNPPYLKWIGXIVP 464
           + + +V+ +P  NGN  YL+    IVP
Sbjct: 362 HSLIQVVGIPSANGNESYLEAASYIVP 388


>02_01_0564 -
           4136114-4136566,4136977-4137047,4137197-4137275,
           4137380-4137535,4137867-4137938,4138081-4138161,
           4138237-4138302,4138482-4138547,4138648-4138698,
           4138982-4139109,4139239-4139377,4139606-4139643,
           4139679-4139748,4140194-4140277
          Length = 517

 Score = 26.6 bits (56), Expect = 9.8
 Identities = 11/47 (23%), Positives = 22/47 (46%)
 Frame = -3

Query: 243 RQQAYSSPDHDL*FFQLHHWVLSHIPPNICHYQHFQKTYLFDYKQKQ 103
           +Q  Y    H   ++Q HH+       N+    H+Q+  ++  +Q+Q
Sbjct: 432 QQHQYYQSQHQQQYYQPHHFQDHQHHHNMYFQTHYQQNQIYQQQQQQ 478


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,248,057
Number of Sequences: 37544
Number of extensions: 202935
Number of successful extensions: 371
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 371
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 931320312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)