BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_C17 (464 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 23 4.0 AY183375-1|AAO24765.1| 679|Anopheles gambiae NADPH cytochrome P... 23 6.9 AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign... 23 6.9 >AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase protein. Length = 1009 Score = 23.4 bits (48), Expect = 4.0 Identities = 8/19 (42%), Positives = 13/19 (68%) Frame = -2 Query: 439 RYGGLPFFMGTDITSHTSY 383 R+GG+ FF+ ++SH Y Sbjct: 881 RFGGVDFFLSQFLSSHGFY 899 >AY183375-1|AAO24765.1| 679|Anopheles gambiae NADPH cytochrome P450 reductase protein. Length = 679 Score = 22.6 bits (46), Expect = 6.9 Identities = 11/39 (28%), Positives = 16/39 (41%) Frame = +3 Query: 333 RTSQVDKLTEYVRSNHPYEVCEVISVPIKNGNPPYLKWI 449 RT + +L EY E IS +G Y +W+ Sbjct: 385 RTHILKELAEYCGEEKDKEFLRFISSTAPDGKAKYQEWV 423 >AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling promoter protein. Length = 1197 Score = 22.6 bits (46), Expect = 6.9 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = -1 Query: 278 INRCYSGNGVYTGSKLILHQTMTYSSSN 195 +NRC +G+ T S H + + SSSN Sbjct: 1082 LNRCSNGSCSSTSSSHSNHSSHSSSSSN 1109 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 468,533 Number of Sequences: 2352 Number of extensions: 9521 Number of successful extensions: 9 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9 length of database: 563,979 effective HSP length: 59 effective length of database: 425,211 effective search space used: 40395045 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -