Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_C17
         (464 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46242-6|CAA86327.3|  115|Caenorhabditis elegans Hypothetical pr...    69   2e-12
AC024208-2|AAF36055.1|  204|Caenorhabditis elegans Hypothetical ...    31   0.31 
AL117193-10|CAB60304.1|  337|Caenorhabditis elegans Hypothetical...    29   2.2  
Z68006-3|CAA91997.2|  633|Caenorhabditis elegans Hypothetical pr...    27   6.6  
U46673-2|AAC48150.1|  166|Caenorhabditis elegans C-type lectin p...    27   8.8  

>Z46242-6|CAA86327.3|  115|Caenorhabditis elegans Hypothetical
           protein F35G12.7 protein.
          Length = 115

 Score = 68.9 bits (161), Expect = 2e-12
 Identities = 33/89 (37%), Positives = 52/89 (58%)
 Frame = +3

Query: 183 PNDEVGRTIGHGLVKNKLAACVNSIPGITSIYEWKNEINEXKXTLLMIKTRTSQVDKLTE 362
           P+ EV  T+    V   LAAC N IP +TS+Y+W+ +I E +  ++++KT  S+V++L+ 
Sbjct: 16  PSKEVAMTVARTTVTEALAACANVIPEVTSVYKWQGKIEEDQEHVVILKTVESKVEELSA 75

Query: 363 YVRSNHPYEVCEVISVPIKNGNPPYLKWI 449
            VRS HP E     ++ I    P +  WI
Sbjct: 76  RVRSLHPAETPCFFTLAIDKITPDFGGWI 104


>AC024208-2|AAF36055.1|  204|Caenorhabditis elegans Hypothetical
           protein Y75B7B.2 protein.
          Length = 204

 Score = 31.5 bits (68), Expect = 0.31
 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +3

Query: 285 KNEINEXKXTLLMIKTRTSQVDKLTEYVRSNHPY-EVCEVISVP 413
           KN I     TLL  +T+T + + LT+ +  N  Y ++C++  +P
Sbjct: 19  KNGIKNGNHTLLCYETKTEEQNPLTKLIEDNVEYSKLCQLCKIP 62


>AL117193-10|CAB60304.1|  337|Caenorhabditis elegans Hypothetical
           protein Y105C5A.17 protein.
          Length = 337

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = -1

Query: 131 HICLTINKSKASLLIDKKLKQFSCLKKSACYLL 33
           H+C+ I +   + L+ K+LK F  ++   CY++
Sbjct: 91  HVCVLIGRFLKNCLVSKRLKLFILIQMFDCYVV 123


>Z68006-3|CAA91997.2|  633|Caenorhabditis elegans Hypothetical
           protein K09C8.4 protein.
          Length = 633

 Score = 27.1 bits (57), Expect = 6.6
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = -3

Query: 186 WVLSHIPPNICHYQHFQKTYLFDYKQ 109
           W  SH+P NI  +    +TY+ +Y++
Sbjct: 515 WPSSHVPTNISKWIKSNRTYMVNYEK 540


>U46673-2|AAC48150.1|  166|Caenorhabditis elegans C-type lectin
           protein 86 protein.
          Length = 166

 Score = 26.6 bits (56), Expect = 8.8
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = -1

Query: 182 YCHIYHRIFVTINTSRRHICLTINKSKASLLIDKKLKQFSCLKKSACYLLDIDF 21
           YC  Y+R+  T N S  H   T+  S  S+     + + + ++K A   LD D+
Sbjct: 30  YCFSYNRVHGTFNDSDAHCLKTVGGSLVSI---HSMIENNWIQKLAVDNLDADY 80


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,164,172
Number of Sequences: 27780
Number of extensions: 198822
Number of successful extensions: 416
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 416
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 829055604
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)