BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_C17 (464 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z46242-6|CAA86327.3| 115|Caenorhabditis elegans Hypothetical pr... 69 2e-12 AC024208-2|AAF36055.1| 204|Caenorhabditis elegans Hypothetical ... 31 0.31 AL117193-10|CAB60304.1| 337|Caenorhabditis elegans Hypothetical... 29 2.2 Z68006-3|CAA91997.2| 633|Caenorhabditis elegans Hypothetical pr... 27 6.6 U46673-2|AAC48150.1| 166|Caenorhabditis elegans C-type lectin p... 27 8.8 >Z46242-6|CAA86327.3| 115|Caenorhabditis elegans Hypothetical protein F35G12.7 protein. Length = 115 Score = 68.9 bits (161), Expect = 2e-12 Identities = 33/89 (37%), Positives = 52/89 (58%) Frame = +3 Query: 183 PNDEVGRTIGHGLVKNKLAACVNSIPGITSIYEWKNEINEXKXTLLMIKTRTSQVDKLTE 362 P+ EV T+ V LAAC N IP +TS+Y+W+ +I E + ++++KT S+V++L+ Sbjct: 16 PSKEVAMTVARTTVTEALAACANVIPEVTSVYKWQGKIEEDQEHVVILKTVESKVEELSA 75 Query: 363 YVRSNHPYEVCEVISVPIKNGNPPYLKWI 449 VRS HP E ++ I P + WI Sbjct: 76 RVRSLHPAETPCFFTLAIDKITPDFGGWI 104 >AC024208-2|AAF36055.1| 204|Caenorhabditis elegans Hypothetical protein Y75B7B.2 protein. Length = 204 Score = 31.5 bits (68), Expect = 0.31 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Frame = +3 Query: 285 KNEINEXKXTLLMIKTRTSQVDKLTEYVRSNHPY-EVCEVISVP 413 KN I TLL +T+T + + LT+ + N Y ++C++ +P Sbjct: 19 KNGIKNGNHTLLCYETKTEEQNPLTKLIEDNVEYSKLCQLCKIP 62 >AL117193-10|CAB60304.1| 337|Caenorhabditis elegans Hypothetical protein Y105C5A.17 protein. Length = 337 Score = 28.7 bits (61), Expect = 2.2 Identities = 10/33 (30%), Positives = 20/33 (60%) Frame = -1 Query: 131 HICLTINKSKASLLIDKKLKQFSCLKKSACYLL 33 H+C+ I + + L+ K+LK F ++ CY++ Sbjct: 91 HVCVLIGRFLKNCLVSKRLKLFILIQMFDCYVV 123 >Z68006-3|CAA91997.2| 633|Caenorhabditis elegans Hypothetical protein K09C8.4 protein. Length = 633 Score = 27.1 bits (57), Expect = 6.6 Identities = 9/26 (34%), Positives = 16/26 (61%) Frame = -3 Query: 186 WVLSHIPPNICHYQHFQKTYLFDYKQ 109 W SH+P NI + +TY+ +Y++ Sbjct: 515 WPSSHVPTNISKWIKSNRTYMVNYEK 540 >U46673-2|AAC48150.1| 166|Caenorhabditis elegans C-type lectin protein 86 protein. Length = 166 Score = 26.6 bits (56), Expect = 8.8 Identities = 16/54 (29%), Positives = 26/54 (48%) Frame = -1 Query: 182 YCHIYHRIFVTINTSRRHICLTINKSKASLLIDKKLKQFSCLKKSACYLLDIDF 21 YC Y+R+ T N S H T+ S S+ + + + ++K A LD D+ Sbjct: 30 YCFSYNRVHGTFNDSDAHCLKTVGGSLVSI---HSMIENNWIQKLAVDNLDADY 80 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,164,172 Number of Sequences: 27780 Number of extensions: 198822 Number of successful extensions: 416 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 407 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 416 length of database: 12,740,198 effective HSP length: 76 effective length of database: 10,628,918 effective search space used: 829055604 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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