BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_C17 (464 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 25 0.53 DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse tr... 23 2.1 DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse tr... 23 2.1 AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 22 2.8 AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 3.7 AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 21 4.9 AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 21 4.9 DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 6.5 AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 21 8.6 >AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. Length = 316 Score = 24.6 bits (51), Expect = 0.53 Identities = 11/30 (36%), Positives = 13/30 (43%) Frame = +1 Query: 43 HADFFKQENCFNFLSINSEALLLFIVKQIC 132 HA F K N L I A L I ++C Sbjct: 110 HASFLKHSNIVKVLMIEQGASLSLITMELC 139 >DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse transcriptase protein. Length = 127 Score = 22.6 bits (46), Expect = 2.1 Identities = 7/19 (36%), Positives = 16/19 (84%) Frame = +1 Query: 85 SINSEALLLFIVKQICLLE 141 +INS+ ++ I+K++C+L+ Sbjct: 22 TINSKKTIMRILKEVCVLQ 40 >DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse transcriptase protein. Length = 110 Score = 22.6 bits (46), Expect = 2.1 Identities = 7/19 (36%), Positives = 16/19 (84%) Frame = +1 Query: 85 SINSEALLLFIVKQICLLE 141 +INS+ ++ I+K++C+L+ Sbjct: 5 TINSKKTIMRILKEVCVLQ 23 >AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. Length = 898 Score = 22.2 bits (45), Expect = 2.8 Identities = 7/21 (33%), Positives = 10/21 (47%) Frame = -3 Query: 204 FFQLHHWVLSHIPPNICHYQH 142 FF H W + P+ C +H Sbjct: 506 FFSFHQWGILVYEPSACRPRH 526 >AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. Length = 735 Score = 21.8 bits (44), Expect = 3.7 Identities = 9/23 (39%), Positives = 13/23 (56%) Frame = -3 Query: 252 SLHRQQAYSSPDHDL*FFQLHHW 184 SL RQ SPD L ++++W Sbjct: 511 SLIRQSIIESPDKQLTLNEIYNW 533 >AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation factor 2 protein. Length = 690 Score = 21.4 bits (43), Expect = 4.9 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = -3 Query: 153 HYQHFQKTYLFDYKQKQGLTIDR*KVKTVF 64 HYQH+ T +F KQK+ ++T+F Sbjct: 7 HYQHYHITPVFT-KQKKVKEDTELNLQTIF 35 >AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. Length = 429 Score = 21.4 bits (43), Expect = 4.9 Identities = 6/17 (35%), Positives = 11/17 (64%) Frame = -1 Query: 179 CHIYHRIFVTINTSRRH 129 C + H++F T+N+ H Sbjct: 404 CALCHKVFRTLNSLNNH 420 >DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride channel variant 1 protein. Length = 509 Score = 21.0 bits (42), Expect = 6.5 Identities = 14/45 (31%), Positives = 21/45 (46%) Frame = -1 Query: 137 RRHICLTINKSKASLLIDKKLKQFSCLKKSACYLLDIDFYD*RER 3 R H+ T+ + + LL+ S LK +LL +YD R R Sbjct: 130 RTHLRGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLR 174 >AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc finger domain-Z1 isoform protein. Length = 111 Score = 20.6 bits (41), Expect = 8.6 Identities = 6/17 (35%), Positives = 12/17 (70%) Frame = -1 Query: 179 CHIYHRIFVTINTSRRH 129 C+I R++ ++N+ R H Sbjct: 35 CNICKRVYSSLNSLRNH 51 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 130,581 Number of Sequences: 438 Number of extensions: 2451 Number of successful extensions: 9 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9 length of database: 146,343 effective HSP length: 53 effective length of database: 123,129 effective search space used: 12436029 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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