BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_C14 (650 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 209 5e-53 UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 198 1e-49 UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 180 3e-44 UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 170 3e-41 UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 164 1e-39 UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 161 1e-38 UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 160 2e-38 UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 157 3e-37 UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 156 5e-37 UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 152 6e-36 UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 152 6e-36 UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 149 4e-35 UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 148 1e-34 UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 148 1e-34 UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 136 3e-31 UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 134 1e-30 UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 134 1e-30 UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 133 4e-30 UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 131 1e-29 UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 129 7e-29 UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 128 2e-28 UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 124 2e-27 UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 121 2e-26 UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 116 4e-25 UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 116 6e-25 UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 116 6e-25 UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 116 6e-25 UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 116 6e-25 UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 111 2e-23 UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 109 7e-23 UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 102 6e-21 UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 99 8e-20 UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 99 8e-20 UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 93 5e-18 UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 91 2e-17 UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 86 6e-16 UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 85 2e-15 UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 80 5e-14 UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 79 1e-13 UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 73 8e-12 UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 70 4e-11 UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 69 7e-11 UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 69 1e-10 UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 68 2e-10 UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 68 2e-10 UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 64 3e-09 UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 63 5e-09 UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 62 1e-08 UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 60 3e-08 UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 60 5e-08 UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 60 5e-08 UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 59 1e-07 UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 58 1e-07 UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 58 2e-07 UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 57 4e-07 UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 57 4e-07 UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 56 6e-07 UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 56 6e-07 UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 55 2e-06 UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 54 4e-06 UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 53 5e-06 UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 52 9e-06 UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 52 1e-05 UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 52 1e-05 UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 52 2e-05 UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 52 2e-05 UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 50 4e-05 UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 50 5e-05 UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 49 1e-04 UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 45 0.001 UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 45 0.001 UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 45 0.002 UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 44 0.002 UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 44 0.003 UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 43 0.007 UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 42 0.010 UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 42 0.010 UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 41 0.022 UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 41 0.030 UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 41 0.030 UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 40 0.039 UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 40 0.052 UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 40 0.068 UniRef50_Q9B6E2 Cluster: Cytochrome c oxidase subunit I; n=2; Ya... 40 0.068 UniRef50_P03876 Cluster: Putative COX1/OXI3 intron 2 protein; n=... 39 0.090 UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia polym... 39 0.12 UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 38 0.28 UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 38 0.28 UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 38 0.28 UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 37 0.36 UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 36 0.64 UniRef50_Q0R4Y4 Cluster: Maturase-like protein; n=2; Eukaryota|R... 36 0.84 UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 35 1.5 UniRef50_P03877 Cluster: Intron-encoded DNA endonuclease aI3 pre... 34 2.6 UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 34 3.4 UniRef50_Q6PW10 Cluster: Cytochrome oxidase subunit I; n=1; Boha... 33 4.5 UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 33 5.9 UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 33 5.9 UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 33 7.8 UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2; ... 33 7.8 >UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; Bilateria|Rep: Cytochrome c oxidase subunit I - Samia cynthia ricini (Indian eri silkmoth) Length = 510 Score = 209 bits (510), Expect = 5e-53 Identities = 117/215 (54%), Positives = 124/215 (57%) Frame = +1 Query: 4 RK*IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAX 183 RK +YSTNHKDIGTLY AELG PGSLIGDDQIYNTIVTAHA Sbjct: 1 RKWLYSTNHKDIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAF 60 Query: 184 XXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAG 363 N LVPL+L APD+AFPR+NN+ F IV NGAG Sbjct: 61 IMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSLTLLISSSIVENGAG 120 Query: 364 TG*TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 543 TG TVYPPLSSNIAH G SV LAIFSLHL GISS SFDQ+PL Sbjct: 121 TGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNLSFDQMPL 180 Query: 544 FV*AVGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 FV AVGITAF AGAIT+LLTDRNL TS Sbjct: 181 FVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTS 215 >UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Periclimenes thermohydrophilus|Rep: Cytochrome oxidase subunit I - Periclimenes thermohydrophilus Length = 217 Score = 198 bits (482), Expect = 1e-49 Identities = 109/202 (53%), Positives = 128/202 (63%) Frame = -1 Query: 647 DVXKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFNRXXXXXXXXXXXXX 468 +V KFRSV +IVIAPA TGS++N+K AV T TN G S I +R Sbjct: 17 EVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVIPADRMLITVVMKFTAPK 76 Query: 467 IDEIPXKCSEKIARXTDLPLCAILDESGG*TVHPVPAPFXTIXLEINNIREGGRSQNLIL 288 I+E P KC+EKI TD P CAI SGG TVHPVP P TI L + ++EGG +QNL+L Sbjct: 77 IEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNLML 136 Query: 287 FIRGNAISGAXSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SSPINDPGFPNSA 108 FIRGNA+SGA ++ GTNQFPNPP KA AVT+ L I S PI PG PNSA Sbjct: 137 FIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSFPIKLPGCPNSA 195 Query: 107 RIKSLKDVPIIPDQIPKIKYNV 42 RIKSL DVP +P PK+KYNV Sbjct: 196 RIKSLSDVPTMPAHAPKMKYNV 217 >UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; Panarthropoda|Rep: Cytochrome c oxidase subunit I - Pagyris cymothoe Length = 487 Score = 180 bits (438), Expect = 3e-44 Identities = 99/179 (55%), Positives = 107/179 (59%) Frame = +1 Query: 112 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINN 291 ELG PGSLIGDDQIYNTIVTAHA N L+PL+L APD+AFPR+NN Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72 Query: 292 IRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXX 471 + F IV NGAGTG TVYPPLSSNIAH G SV LAIFSLHL GISS Sbjct: 73 MSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSIL 132 Query: 472 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 SFDQ+PLF+ AVGITA AGAIT+LLTDRNL TS Sbjct: 133 GAINFITTIINMRINKMSFDQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTS 191 >UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus rubiginosus Length = 504 Score = 170 bits (413), Expect = 3e-41 Identities = 98/212 (46%), Positives = 112/212 (52%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXX 192 ++STNHKDIGTLY AELG PG+L+GDDQIYN IVTAHA Sbjct: 8 LFSTNHKDIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMI 67 Query: 193 XXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG* 372 N LVPL++ APD+AFPR+NN+ F V GAGTG Sbjct: 68 FFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGW 127 Query: 373 TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 552 TVYPPL+ N+AH G SV LAIFSLHL GISS S Q PLFV Sbjct: 128 TVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAISQYQTPLFVW 187 Query: 553 AVGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 +V ITA A IT+LLTDRNL T+ Sbjct: 188 SVLITAVLLLLSLPVLAAGITMLLTDRNLNTT 219 >UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio (Zebrafish) (Brachydanio rerio) Length = 516 Score = 164 bits (399), Expect = 1e-39 Identities = 94/211 (44%), Positives = 108/211 (51%) Frame = +1 Query: 16 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 195 +STNHKDIGTLY AEL PG+L+GDDQIYN IVTAHA Sbjct: 8 FSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIF 67 Query: 196 XXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*T 375 N LVPL++ APD+AFPR+NN+ F V GAGTG T Sbjct: 68 FMVMPILIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWT 127 Query: 376 VYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 555 VYPPL+ N+AH G SV L IFSLHL G+SS S Q PLFV A Sbjct: 128 VYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTISQYQTPLFVWA 187 Query: 556 VGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 V +TA A IT+LLTDRNL T+ Sbjct: 188 VLVTAVLLLLSLPVLAAGITMLLTDRNLNTT 218 >UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; Eukaryota|Rep: Cytochrome c oxidase subunit I - Ophisurus macrorhynchos Length = 546 Score = 161 bits (392), Expect = 1e-38 Identities = 92/211 (43%), Positives = 108/211 (51%) Frame = +1 Query: 16 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 195 +STNHKDIGTLY AEL PG+L+GDDQIYN IVTAHA Sbjct: 8 FSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIF 67 Query: 196 XXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*T 375 N LVPL++ APD+AFPR+NN+ F V GAGTG T Sbjct: 68 FMVMPVMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWT 127 Query: 376 VYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 555 VYPPL+ N+AH G SV L IFSLHL G+SS + Q PLFV + Sbjct: 128 VYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAITQYQTPLFVWS 187 Query: 556 VGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 V +TA A IT+LLTDRNL T+ Sbjct: 188 VLVTAVLLLLSLPVLAAGITMLLTDRNLNTT 218 >UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498; root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens (Human) Length = 513 Score = 160 bits (389), Expect = 2e-38 Identities = 91/212 (42%), Positives = 109/212 (51%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXX 192 ++STNHKDIGTLY AELG PG+L+G+D IYN IVTAHA Sbjct: 7 LFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMI 66 Query: 193 XXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG* 372 N LVPL++ APD+AFPR+NN+ F +V GAGTG Sbjct: 67 FFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGW 126 Query: 373 TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 552 TVYPPL+ N +H G SV L IFSLHL G+SS + Q PLFV Sbjct: 127 TVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMTQYQTPLFVW 186 Query: 553 AVGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 +V ITA A IT+LLTDRNL T+ Sbjct: 187 SVLITAVLLLLSLPVLAAGITMLLTDRNLNTT 218 >UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; cellular organisms|Rep: Cytochrome c oxidase subunit I - Pandaka lidwilli Length = 507 Score = 157 bits (380), Expect = 3e-37 Identities = 91/207 (43%), Positives = 104/207 (50%) Frame = +1 Query: 28 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 207 HKDIGTLY AEL PG+L+GDDQIYN IVTAHA Sbjct: 1 HKDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVM 60 Query: 208 XXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPP 387 N L+PL++ APD+AFPR+NN+ F + GAGTG TVYPP Sbjct: 61 PIMIGGFGNWLIPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPP 120 Query: 388 LSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGIT 567 L+ N+AH G SV L IFSLHL GISS S Q PLFV AV IT Sbjct: 121 LAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAISQYQTPLFVWAVLIT 180 Query: 568 AFXXXXXXXXXAGAITILLTDRNLXTS 648 A A IT+LLTDRNL T+ Sbjct: 181 AVLLLLSLPVLAAGITMLLTDRNLNTT 207 >UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I - Placozoan sp. BZ2423 Length = 498 Score = 156 bits (378), Expect = 5e-37 Identities = 87/211 (41%), Positives = 107/211 (50%) Frame = +1 Query: 16 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 195 +S NHKDIG+LY EL +PGS++GDD +YN IVTAHA Sbjct: 9 FSCNHKDIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIF 68 Query: 196 XXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*T 375 N VPL++ APD+AFPR+NNI F +V GAGTG T Sbjct: 69 FLVMPTMIGGFGNWFVPLMIGAPDMAFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWT 128 Query: 376 VYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 555 VYPPL+S AH G SV +AIFSLHL G+SS + ++PLFV + Sbjct: 129 VYPPLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGMTMSRIPLFVWS 188 Query: 556 VGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 V ITA AGAIT+LLTDR T+ Sbjct: 189 VLITAILLLLSLPVLAGAITMLLTDRYFNTT 219 >UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8 precursor [Contains: Truncated non-functional cytochrome oxidase 1; Intron-encoded endonuclease aI8 (EC 3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded endonuclease aI8 precursor [Contains: Truncated non-functional cytochrome oxidase 1; Intron-encoded endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut fungus) Length = 645 Score = 152 bits (369), Expect = 6e-36 Identities = 91/214 (42%), Positives = 105/214 (49%), Gaps = 2/214 (0%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 186 +YSTN KDIGTLY EL PG L GD Q+YN I+TAHA Sbjct: 5 LYSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFV 64 Query: 187 XXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 366 N LVP+++ APD+AFPR+NNI F V GAGT Sbjct: 65 MIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGT 124 Query: 367 G*TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 546 G TVYPPLS +H G SV LAIFSLHL GISS + +LPLF Sbjct: 125 GWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLF 184 Query: 547 V*AVGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 V A+ +TA AGAIT+LLTDRN TS Sbjct: 185 VWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTS 218 >UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5 precursor [Contains: Truncated non-functional cytochrome oxidase 1; Intron-encoded endonuclease aI5 (EC 3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable intron-encoded endonuclease aI5 precursor [Contains: Truncated non-functional cytochrome oxidase 1; Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago maydis (Smut fungus) Length = 536 Score = 152 bits (369), Expect = 6e-36 Identities = 91/214 (42%), Positives = 105/214 (49%), Gaps = 2/214 (0%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 186 +YSTN KDIGTLY EL PG L GD Q+YN I+TAHA Sbjct: 5 LYSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFV 64 Query: 187 XXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 366 N LVP+++ APD+AFPR+NNI F V GAGT Sbjct: 65 MIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGT 124 Query: 367 G*TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 546 G TVYPPLS +H G SV LAIFSLHL GISS + +LPLF Sbjct: 125 GWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLF 184 Query: 547 V*AVGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 V A+ +TA AGAIT+LLTDRN TS Sbjct: 185 VWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTS 218 >UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931; cellular organisms|Rep: Cytochrome c oxidase subunit 1 - Arabidopsis thaliana (Mouse-ear cress) Length = 527 Score = 149 bits (362), Expect = 4e-35 Identities = 85/214 (39%), Positives = 107/214 (50%), Gaps = 2/214 (0%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXX 186 ++STNHKDIGTLY EL PG I G+ Q+YN ++TAHA Sbjct: 8 LFSTNHKDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFL 67 Query: 187 XXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 366 N VP+++ APD+AFPR+NNI F +V G+GT Sbjct: 68 MIFFMVMPAMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGT 127 Query: 367 G*TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 546 G TVYPPLS +H G +V LAIFSLHL G+SS + +LPLF Sbjct: 128 GWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGMTMHRLPLF 187 Query: 547 V*AVGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 V +V +TAF AGAIT+LLTDRN T+ Sbjct: 188 VWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTT 221 >UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; Bilateria|Rep: Cytochrome c oxidase subunit I - Homalopoma maculosa Length = 219 Score = 148 bits (359), Expect = 1e-34 Identities = 83/179 (46%), Positives = 96/179 (53%) Frame = +1 Query: 112 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINN 291 ELG PGS IG+DQ+YN +VTAHA N LVPL+L APD+AFPR+NN Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82 Query: 292 IRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXX 471 + F V +GAGTG TVYPPLS N AH G SV LAIFSLHL G+SS Sbjct: 83 MSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSSIL 142 Query: 472 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 + + LFV +V ITA AGAIT+LLTDRN TS Sbjct: 143 GAVNFITTVINMRWGAMKIELVSLFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTS 201 >UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; cellular organisms|Rep: Cytochrome c oxidase subunit 1 - Chondrus crispus (Carragheen) Length = 532 Score = 148 bits (358), Expect = 1e-34 Identities = 86/214 (40%), Positives = 108/214 (50%), Gaps = 2/214 (0%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 186 I+STNHKDIGTLY EL P + L+G+ QIYN ++TAHA Sbjct: 13 IFSTNHKDIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFL 72 Query: 187 XXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 366 N LVP+++ +PD+AFPR+NNI F +V G GT Sbjct: 73 MIFFMVMPVMIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGT 132 Query: 367 G*TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 546 G TVYPPLSS +H G +V LAIFSLH+ G SS S ++PLF Sbjct: 133 GWTVYPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQSMYRIPLF 192 Query: 547 V*AVGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 V ++ +TAF AGAIT+LLTDRN TS Sbjct: 193 VWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTS 226 >UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742; Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia melitaearum (Parasitoid wasp) Length = 499 Score = 136 bits (330), Expect = 3e-31 Identities = 77/179 (43%), Positives = 95/179 (53%) Frame = +1 Query: 112 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINN 291 ELG PGSLIG+DQIYN+IVT+HA N L+PL+L +PD++FPR+NN Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRMNN 83 Query: 292 IRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXX 471 + F + G GTG TVYPPLS + H G SV L IFSLHL G SS Sbjct: 84 MSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASSIM 143 Query: 472 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 + D++ LF +V ITA AGAIT+LLTDRN+ TS Sbjct: 144 GAVNFITTILNMRSNLFNMDKMSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTS 202 >UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha precursor (DNA endonuclease I-SceIV) [Contains: Truncated non-functional cytochrome oxidase 1; DNA endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep: Intron-encoded DNA endonuclease aI5 alpha precursor (DNA endonuclease I-SceIV) [Contains: Truncated non-functional cytochrome oxidase 1; DNA endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I- SceIV)] - Saccharomyces cerevisiae (Baker's yeast) Length = 630 Score = 134 bits (325), Expect = 1e-30 Identities = 83/214 (38%), Positives = 100/214 (46%), Gaps = 2/214 (0%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 186 +YSTN KDI LY EL PGS L G+ Q++N +V HA Sbjct: 6 LYSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVL 65 Query: 187 XXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 366 N L+PL++ A D AFPRINNI F +V +GAGT Sbjct: 66 MIFFLVMPALIGGFGNYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGT 125 Query: 367 G*TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 546 G TVYPPLSS AH G SV LAIF+LHL ISS + +LPLF Sbjct: 126 GWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLF 185 Query: 547 V*AVGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 V ++ ITAF + IT+LL DRN TS Sbjct: 186 VWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTS 219 >UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 precursor (DNA endonuclease I- SceII) [Contains: Truncated non-functional cytochrome oxidase 1; DNA endonuclease aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]; n=4; Saccharomycetales|Rep: Intron-encoded DNA endonuclease aI4 precursor (DNA endonuclease I- SceII) [Contains: Truncated non-functional cytochrome oxidase 1; DNA endonuclease aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)] - Saccharomyces cerevisiae (Baker's yeast) Length = 556 Score = 134 bits (325), Expect = 1e-30 Identities = 83/214 (38%), Positives = 100/214 (46%), Gaps = 2/214 (0%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 186 +YSTN KDI LY EL PGS L G+ Q++N +V HA Sbjct: 6 LYSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVL 65 Query: 187 XXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 366 N L+PL++ A D AFPRINNI F +V +GAGT Sbjct: 66 MIFFLVMPALIGGFGNYLLPLMIGATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGT 125 Query: 367 G*TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 546 G TVYPPLSS AH G SV LAIF+LHL ISS + +LPLF Sbjct: 126 GWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLF 185 Query: 547 V*AVGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 V ++ ITAF + IT+LL DRN TS Sbjct: 186 VWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTS 219 >UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|Rep: Endonuclease - Saccharomyces servazzii (Yeast) Length = 675 Score = 133 bits (321), Expect = 4e-30 Identities = 81/214 (37%), Positives = 101/214 (47%), Gaps = 2/214 (0%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 186 +YSTN KDI +Y EL PGS L G+ Q++N +V HA Sbjct: 6 LYSTNAKDISIMYFMLALFSGMAGSAMSMIIRMELAAPGSQYLHGNSQLFNVLVVGHAVL 65 Query: 187 XXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 366 N ++PL++ A D++FPRIN+I F +V +GAGT Sbjct: 66 MIFFLAMPALIGGFGNYMLPLMIGATDMSFPRINSIGFWLLPMGLVCLVTSTLVESGAGT 125 Query: 367 G*TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 546 G TVYPPLSS AH G SV LAIFSLHL ISS S ++PLF Sbjct: 126 GWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMPLF 185 Query: 547 V*AVGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 V A+ ITAF + IT+LL DRN TS Sbjct: 186 VWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTS 219 >UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4 precursor [Contains: Truncated non-functional cytochrome oxidase 1; Intron-encoded endonuclease aI4 (EC 3.1.-.-)]; n=3; Basidiomycota|Rep: Probable intron-encoded endonuclease aI4 precursor [Contains: Truncated non-functional cytochrome oxidase 1; Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago maydis (Smut fungus) Length = 530 Score = 131 bits (317), Expect = 1e-29 Identities = 80/200 (40%), Positives = 93/200 (46%), Gaps = 2/200 (1%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 186 +YSTN KDIGTLY EL PG L GD Q+YN I+TAHA Sbjct: 5 LYSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFV 64 Query: 187 XXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 366 N LVP+++ APD+AFPR+NNI F V GAGT Sbjct: 65 MIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGT 124 Query: 367 G*TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 546 G TVYPPLS +H G SV LAIFSLHL GISS + +LPLF Sbjct: 125 GWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLF 184 Query: 547 V*AVGITAFXXXXXXXXXAG 606 V A+ +TA AG Sbjct: 185 VWAIFVTAILLLLSLPVLAG 204 >UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep: Cytochrome oxidase subunits 1 and 2 polyprotein - Phaeosphaeria nodorum SN15 Length = 789 Score = 129 bits (311), Expect = 7e-29 Identities = 80/211 (37%), Positives = 95/211 (45%), Gaps = 1/211 (0%) Frame = +1 Query: 19 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXX 195 S+N KDIG LY EL PG I D+Q+YN+I+TAHA Sbjct: 9 SSNAKDIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIF 68 Query: 196 XXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*T 375 N L+PL L PD+ FPR+NNI + + NG GTG T Sbjct: 69 FMVMPALIGGFGNFLLPLGLGGPDMGFPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWT 128 Query: 376 VYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 555 +YPPLS +H G SV LAIF LHL GISS +L LF A Sbjct: 129 LYPPLSGIQSHSGPSVDLAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIRLHKLILFAWA 188 Query: 556 VGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 V ITA AG IT++LTDRN TS Sbjct: 189 VVITAVLLLLSLPVLAGGITMVLTDRNFNTS 219 >UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; n=1; Saccharomyces castellii|Rep: I-SceII DNA endonuclease-like protein - Saccharomyces castellii (Yeast) Length = 598 Score = 128 bits (308), Expect = 2e-28 Identities = 78/214 (36%), Positives = 99/214 (46%), Gaps = 2/214 (0%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 186 +YSTN KDI LY EL PG L G++Q++N +V HA Sbjct: 6 LYSTNAKDIAVLYFLLALFSGMAGTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAIL 65 Query: 187 XXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 366 N ++PL++ A D AFPRINNI F +V +GAGT Sbjct: 66 MIFFMVMPALIGGFGNYMLPLMIGATDTAFPRINNIGFWLLPMGLVCLVTSTLVESGAGT 125 Query: 367 G*TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 546 G TVYPPL+S AH G SV LAIF+LH+ ISS + +LPLF Sbjct: 126 GWTVYPPLASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPLF 185 Query: 547 V*AVGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 V A+ ITA + +T+LL DRN TS Sbjct: 186 VWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTS 219 >UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; Eukaryota|Rep: Cytochrome c oxidase subunit I - Paracoccidioides brasiliensis Length = 710 Score = 124 bits (299), Expect = 2e-27 Identities = 75/211 (35%), Positives = 94/211 (44%), Gaps = 1/211 (0%) Frame = +1 Query: 19 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXX 195 S+N KDI LY EL PG I D+Q+YN+I+T+H Sbjct: 35 SSNAKDIAILYLIFALFSGLLGTAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIF 94 Query: 196 XXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*T 375 N L+P+++ PD+AFPR+NN+ + I+ NG GTG T Sbjct: 95 FMVMPALIGGFGNFLLPILIGGPDMAFPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWT 154 Query: 376 VYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 555 +YPPLS +H V L IF LHL GISS +L LF A Sbjct: 155 LYPPLSGIQSHSSMGVDLGIFGLHLSGISSLLGAINFIATLLNMRSPGIKLHKLALFGWA 214 Query: 556 VGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 V ITA A AIT+LLTDRNL TS Sbjct: 215 VVITAVLLLLSLPVLAAAITMLLTDRNLNTS 245 >UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 - Naegleria gruberi Length = 633 Score = 121 bits (291), Expect = 2e-26 Identities = 76/214 (35%), Positives = 90/214 (42%), Gaps = 2/214 (0%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 186 I++TNHK IG LY EL PG L G+ YN I T H Sbjct: 9 IFTTNHKRIGILYLFFGVFNGFLAVLLSMLMRLELAFPGDQILFGEYHFYNMITTVHGVL 68 Query: 187 XXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 366 N VP+++ APD++FPR+NN F G GT Sbjct: 69 MLFVVVMPILFGGFGNYFVPILIGAPDMSFPRLNNFSFWLLPGAILLAVLATYSEGGPGT 128 Query: 367 G*TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 546 G TVYPPLSS +H G SV L IFS HL GI S LPLF Sbjct: 129 GWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFNKDLPLF 188 Query: 547 V*AVGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 V +V +T+F A AIT+LL DRN TS Sbjct: 189 VWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTS 222 >UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa group|Rep: COX1-i5 protein - Yarrowia lipolytica (Candida lipolytica) Length = 608 Score = 116 bits (280), Expect = 4e-25 Identities = 74/214 (34%), Positives = 94/214 (43%), Gaps = 2/214 (0%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 186 ++STN KDI LY EL N GS L G+ Q +N ++TAHA Sbjct: 11 LFSTNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAIL 70 Query: 187 XXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 366 N L+PL+L A D+AF R+NNI F +V GAGT Sbjct: 71 MIFFFVMPALVGGFGNYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGT 130 Query: 367 G*TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 546 G TVY PL+ +H G +V LAIFSLHL G SS ++ +PLF Sbjct: 131 GWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGMKYENVPLF 190 Query: 547 V*AVGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 AV TA A +T+ + DRN TS Sbjct: 191 AWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTS 224 >UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast) Length = 763 Score = 116 bits (278), Expect = 6e-25 Identities = 70/214 (32%), Positives = 98/214 (45%), Gaps = 2/214 (0%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELG--NPGSLIGDDQIYNTIVTAHAXX 186 ++STN ++I LY EL NP L+ + Q++N ++TAHA Sbjct: 23 LFSTNCQNISILYGIFSLFSGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALF 82 Query: 187 XXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 366 N LVPL + + D AFPRINN+ F ++ G G+ Sbjct: 83 MVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGS 142 Query: 367 G*TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 546 G T+YPPL+S +H G S+ +AIF+LHL G+SS + +LPLF Sbjct: 143 GWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLF 202 Query: 547 V*AVGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 V +V ITA A +T+LL DRN TS Sbjct: 203 VWSVLITAVLIILALPVLAAGLTMLLMDRNFNTS 236 >UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast) Length = 676 Score = 116 bits (278), Expect = 6e-25 Identities = 70/214 (32%), Positives = 98/214 (45%), Gaps = 2/214 (0%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELG--NPGSLIGDDQIYNTIVTAHAXX 186 ++STN ++I LY EL NP L+ + Q++N ++TAHA Sbjct: 23 LFSTNCQNISILYGIFSLFSGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALF 82 Query: 187 XXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 366 N LVPL + + D AFPRINN+ F ++ G G+ Sbjct: 83 MVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGS 142 Query: 367 G*TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 546 G T+YPPL+S +H G S+ +AIF+LHL G+SS + +LPLF Sbjct: 143 GWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLF 202 Query: 547 V*AVGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 V +V ITA A +T+LL DRN TS Sbjct: 203 VWSVLITAVLIILALPVLAAGLTMLLMDRNFNTS 236 >UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep: Cox-i3 protein - Candida stellata (Yeast) Length = 588 Score = 116 bits (278), Expect = 6e-25 Identities = 70/214 (32%), Positives = 98/214 (45%), Gaps = 2/214 (0%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELG--NPGSLIGDDQIYNTIVTAHAXX 186 ++STN ++I LY EL NP L+ + Q++N ++TAHA Sbjct: 23 LFSTNCQNISILYGIFSLFSGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALF 82 Query: 187 XXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 366 N LVPL + + D AFPRINN+ F ++ G G+ Sbjct: 83 MVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGS 142 Query: 367 G*TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 546 G T+YPPL+S +H G S+ +AIF+LHL G+SS + +LPLF Sbjct: 143 GWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLF 202 Query: 547 V*AVGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 V +V ITA A +T+LL DRN TS Sbjct: 203 VWSVLITAVLIILALPVLAAGLTMLLMDRNFNTS 236 >UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep: Cox-i2 protein - Candida stellata (Yeast) Length = 586 Score = 116 bits (278), Expect = 6e-25 Identities = 70/214 (32%), Positives = 98/214 (45%), Gaps = 2/214 (0%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELG--NPGSLIGDDQIYNTIVTAHAXX 186 ++STN ++I LY EL NP L+ + Q++N ++TAHA Sbjct: 23 LFSTNCQNISILYGIFSLFSGLVGLSLSVLMRIELSSPNPQILMHNGQLWNVLITAHALF 82 Query: 187 XXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 366 N LVPL + + D AFPRINN+ F ++ G G+ Sbjct: 83 MVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGS 142 Query: 367 G*TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 546 G T+YPPL+S +H G S+ +AIF+LHL G+SS + +LPLF Sbjct: 143 GWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLF 202 Query: 547 V*AVGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 V +V ITA A +T+LL DRN TS Sbjct: 203 VWSVLITAVLIILALPVLAAGLTMLLMDRNFNTS 236 >UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I - Trichoderma reesei (Hypocrea jecorina) Length = 635 Score = 111 bits (266), Expect = 2e-23 Identities = 74/215 (34%), Positives = 93/215 (43%), Gaps = 5/215 (2%) Frame = +1 Query: 19 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXX 195 STN KDIGTLY EL PG I ++Q+YN+I+TAHA Sbjct: 37 STNAKDIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIF 96 Query: 196 XXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*T 375 N L+PL++ PD+AFPR+NNI F I+ G GTG T Sbjct: 97 FMVMPALIGGFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWT 156 Query: 376 V----YPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 543 + YPPLS +H G SV LAIF+LHL G+SS +L L Sbjct: 157 LLKDKYPPLSGLQSHSGPSVDLAIFALHLSGVSSLLGSINFITTVANMRTPGIKLHKLAL 216 Query: 544 FV*AVGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 F + IT++LTDRN TS Sbjct: 217 F-------GWATWSSRSRYFLGITMVLTDRNFNTS 244 >UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteobacteria|Rep: Cytochrome-c oxidase - Sphingomonas sp. SKA58 Length = 556 Score = 109 bits (261), Expect = 7e-23 Identities = 80/230 (34%), Positives = 100/230 (43%), Gaps = 20/230 (8%) Frame = +1 Query: 19 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-------SLIGD------DQIY- 156 STNHKDIGTLY AEL PG + D DQ Y Sbjct: 33 STNHKDIGTLYLIFAIIAGIIGGAISGLMRAELAEPGIQYLQTWARFSDGPSATLDQAYH 92 Query: 157 --NTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXX 330 N ++TAH N VP+++ APD+AFPR+NNI F Sbjct: 93 LWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNISFWLLIPAFALL 152 Query: 331 XXRXIV----XNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXX 498 V NGAGTG TVY PLS++ G +V +AI SLH+ G SS Sbjct: 153 LGSTFVPGGTGNGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTI 211 Query: 499 XXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 + ++PLFV +V +TAF A AIT+LLTDRN T+ Sbjct: 212 LNMRAPGMTLHKMPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTT 261 >UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Naupactini|Rep: Cytochrome c oxidase subunit I - Galapaganus collaris Length = 406 Score = 102 bits (245), Expect = 6e-21 Identities = 62/134 (46%), Positives = 71/134 (52%) Frame = +1 Query: 247 LILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHRGRSVX 426 L L APD FPR N+ F V GAGTG TV PPLS+NIAH G SV Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVD 63 Query: 427 LAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAG 606 LAIFSLH+ G+ S + ++PLFV AV ITA AG Sbjct: 64 LAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVEITAILLLLSLPVLAG 123 Query: 607 AITILLTDRNLXTS 648 AIT+LLTDRN+ TS Sbjct: 124 AITMLLTDRNINTS 137 >UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides borealis Length = 513 Score = 99.1 bits (236), Expect = 8e-20 Identities = 57/127 (44%), Positives = 66/127 (51%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXX 192 + STNHKD GTL AELG PG+L+GDDQ N IVTAHA Sbjct: 8 LXSTNHKDXGTLXXIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMI 67 Query: 193 XXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG* 372 N LVPL++ APD+AFPR+NN+ F V GAGTG Sbjct: 68 FXMXMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGW 127 Query: 373 TVYPPLS 393 TVYPPL+ Sbjct: 128 TVYPPLA 134 >UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular organisms|Rep: Cytochrome-c oxidase - Jannaschia sp. (strain CCS1) Length = 628 Score = 99.1 bits (236), Expect = 8e-20 Identities = 57/182 (31%), Positives = 84/182 (46%), Gaps = 2/182 (1%) Frame = +1 Query: 109 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPR 282 A LG L G D ++N ++T H N +PL++ APD+AFPR Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202 Query: 283 INNIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLXGIS 462 +NN+ + ++ GAG G T YPP+S+ R+V AIF++H+ G S Sbjct: 203 LNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGAS 262 Query: 463 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLX 642 S + ++PLF +V +TA+ AGAIT+LLTDRN Sbjct: 263 SILGSINFITTFLNMRAPGMTLHKVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFG 322 Query: 643 TS 648 T+ Sbjct: 323 TT 324 >UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; Nematoda|Rep: Cytochrome c oxidase subunit I - Onchocerca volvulus Length = 548 Score = 93.1 bits (221), Expect = 5e-18 Identities = 60/214 (28%), Positives = 83/214 (38%), Gaps = 2/214 (0%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 186 I + NHK IGT Y EL +PG G Q+YN+++T H Sbjct: 16 INTVNHKTIGTYYIVLGYWAGLGGSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVL 75 Query: 187 XXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 366 N ++PL+L AP++AFPR+N + F + G G+ Sbjct: 76 MIFFLVMPILIGGFGNWMLPLMLGAPEMAFPRVNALSFWFTFVALLMVYQSFFIGGGPGS 135 Query: 367 G*TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 546 T YPPLS S+ I LH GI S + DQ+ +F Sbjct: 136 SWTFYPPLSVE-GQPELSLDTMILGLHTVGIGSLLGAINFMVTTQNMRSTAVTLDQISMF 194 Query: 547 V*AVGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 V +T+F AG++ LL DRN TS Sbjct: 195 VWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTS 228 >UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula unguis Length = 573 Score = 91.5 bits (217), Expect = 2e-17 Identities = 57/211 (27%), Positives = 86/211 (40%), Gaps = 1/211 (0%) Frame = +1 Query: 19 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 198 S NHKDIGT+Y EL +PG + +Y++I+T HA Sbjct: 11 SVNHKDIGTIYLYMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFF 70 Query: 199 XXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*TV 378 N +PL++ D++ PR+NN+ + G G G T+ Sbjct: 71 FVMPTSIGGLGNWFIPLMIKIKDLSMPRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTM 130 Query: 379 YPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQL-PLFV*A 555 YPPLS++ G + LA+FSLH+ G+SS F L P+ + Sbjct: 131 YPPLSNSEFMDGLPIDLAVFSLHMAGMSSIAGSINFLVTIFNMRMGALFFMSLNPMLIWT 190 Query: 556 VGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 + T+ A +T+LL DR+ TS Sbjct: 191 LFGTSILLVTSVPVLAAGLTLLLLDRHFSTS 221 >UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eukaryota|Rep: Cytochrome c oxidase subunit 1 - Leishmania tarentolae (Sauroleishmania tarentolae) Length = 549 Score = 86.2 bits (204), Expect = 6e-16 Identities = 59/212 (27%), Positives = 79/212 (37%), Gaps = 2/212 (0%) Frame = +1 Query: 19 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELG--NPGSLIGDDQIYNTIVTAHAXXXX 192 S +HK IG Y EL G L GD Q YN ++T+H Sbjct: 10 SVSHKMIGLCYLLVAILSGFVGYVYSLFIRLELSLIGCGILFGDYQFYNVLITSHGLIMV 69 Query: 193 XXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG* 372 N +P++ PD+ FPR+NN+ F + G G G Sbjct: 70 FAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGW 129 Query: 373 TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 552 T+YP L H + +F++HL GISS SF LF+ Sbjct: 130 TLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINLLGTLFCCRRKFFSFLSWSLFIW 189 Query: 553 AVGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 A ITA AG +T++L DRN TS Sbjct: 190 AALITAILLIITLPVLAGGVTLILCDRNFNTS 221 >UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2 precursor [Contains: Truncated non-functional cytochrome oxidase 1; Intron-encoded endonuclease aI2 (EC 3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable intron-encoded endonuclease aI2 precursor [Contains: Truncated non-functional cytochrome oxidase 1; Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago maydis (Smut fungus) Length = 533 Score = 84.6 bits (200), Expect = 2e-15 Identities = 52/132 (39%), Positives = 60/132 (45%), Gaps = 2/132 (1%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 186 +YSTN KDIGTLY EL PG L GD Q+YN I+TAHA Sbjct: 5 LYSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFV 64 Query: 187 XXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 366 N LVP+++ APD+AFPR+NNI F V GAGT Sbjct: 65 MIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGT 124 Query: 367 G*TVYPPLSSNI 402 G TV LS I Sbjct: 125 GWTVKCKLSQII 136 >UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Watasenia scintillans|Rep: Cytochrome c oxidase subunit I - Watasenia scintillans (Sparkling enope) Length = 217 Score = 79.8 bits (188), Expect = 5e-14 Identities = 48/118 (40%), Positives = 58/118 (49%) Frame = +1 Query: 112 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINN 291 ELG PGSL+ DDQ+YN +VTAH N LVPL+L APD+AFPR+NN Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83 Query: 292 IRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLXGISS 465 + F + G + PL G SV LAIF LHL G+SS Sbjct: 84 MSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTISAGPSVDLAIFPLHLAGVSS 139 >UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha (Liverwort) Length = 434 Score = 78.6 bits (185), Expect = 1e-13 Identities = 43/124 (34%), Positives = 58/124 (46%), Gaps = 2/124 (1%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXX 186 ++STNHKDIGTLY EL PG+ I G+ Q+YN ++TAHA Sbjct: 9 LFSTNHKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFL 68 Query: 187 XXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 366 N VP+++ +PD+AFPR+NNI F +V G G+ Sbjct: 69 MIFFMVMPAMIGGFGNWFVPILIGSPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGCGS 128 Query: 367 G*TV 378 G TV Sbjct: 129 GWTV 132 >UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes cretinus|Rep: Cytochrome c oxidase subunit I - Aedes cretinus Length = 153 Score = 72.5 bits (170), Expect = 8e-12 Identities = 36/65 (55%), Positives = 42/65 (64%) Frame = +1 Query: 247 LILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHRGRSVX 426 L+L APD+AFPR+NN+ F +V NGAGTG TVYPPLSS AH G SV Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVD 60 Query: 427 LAIFS 441 LAI+S Sbjct: 61 LAIYS 65 Score = 33.9 bits (74), Expect = 3.4 Identities = 16/35 (45%), Positives = 18/35 (51%) Frame = +3 Query: 546 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLXYII 650 CM C +Y TCFS S+Y IIN K Y I Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFI 131 >UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica (Candida lipolytica) Length = 457 Score = 70.1 bits (164), Expect = 4e-11 Identities = 45/132 (34%), Positives = 57/132 (43%), Gaps = 2/132 (1%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 186 ++STN KDI LY EL N GS L G+ Q +N ++TAHA Sbjct: 11 LFSTNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAIL 70 Query: 187 XXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 366 N L+PL+L A D+AF R+NNI F +V GAGT Sbjct: 71 MIFFFVMPALVGGFGNYLMPLMLGASDMAFARLNNISFWLLVPSLILILTSALVEAGAGT 130 Query: 367 G*TVYPPLSSNI 402 G TV SS + Sbjct: 131 GWTVKKICSSKM 142 >UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like terminal oxidase, subunit I - Haloquadratum walsbyi (strain DSM 16790) Length = 634 Score = 69.3 bits (162), Expect = 7e-11 Identities = 59/218 (27%), Positives = 82/218 (37%), Gaps = 8/218 (3%) Frame = +1 Query: 19 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 198 + +HKDIG LY EL +PG + + YN+++T+H Sbjct: 91 TVDHKDIGLLYGAFGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSHGITMLFL 150 Query: 199 XXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXN---GAGTG 369 N L+PL++ A D+AFPRIN I F A TG Sbjct: 151 FATPIIAAFS-NYLIPLLIGADDMAFPRINAIAFWLLPPAALLIWAGFFPIPEVIPAQTG 209 Query: 370 *TVYPPLS-----SNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQ 534 T+Y PLS N A+ G V L + LHL G+S+ S+ Sbjct: 210 WTMYTPLSVGEGMGNQANAG--VDLMLLGLHLSGVSATMGSINFIATIFTERGKNVSWAN 267 Query: 535 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 L +F + + AI +LL DRN TS Sbjct: 268 LDIFSWTILTQSGLILFAFPLLGSAIMMLLFDRNFGTS 305 >UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Dicyema misakiense|Rep: Cytochrome c oxidase subunit I - Dicyema misakiense Length = 473 Score = 68.5 bits (160), Expect = 1e-10 Identities = 56/211 (26%), Positives = 78/211 (36%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXX 192 I S NH D+ LY +L P L D +YN VT H Sbjct: 4 IMSVNHIDVSLLYFSLGIFSALLGMSFSLLFRLQLAFPSILTSD--VYNAFVTLHGLVMV 61 Query: 193 XXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG* 372 N L+P PD+ FPR+N + F ++ + A G Sbjct: 62 FFAAMPTAIGFFANLLIPYHCNLPDLLFPRMNALSFWLMPFSLS-----LLLFSMASAGW 116 Query: 373 TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 552 T YPPLSS SV ++FSLHL GI+S + L LF Sbjct: 117 TFYPPLSS----LSPSVEFSVFSLHLAGIASLISSCNFLVTMLATRTSL--WYSLSLFCW 170 Query: 553 AVGITAFXXXXXXXXXAGAITILLTDRNLXT 645 ++ + + A IT++LTD++L T Sbjct: 171 SIVLVSLLLVLSLPVLAVGITLILTDKHLGT 201 >UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit 1 - Munidopsis verrucosus Length = 154 Score = 68.1 bits (159), Expect = 2e-10 Identities = 37/83 (44%), Positives = 46/83 (55%) Frame = +1 Query: 385 PLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 564 PL+S+IAH G SV +AIFSLHL G+SS + D++PLF+ AV I Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131 Query: 565 TAFXXXXXXXXXAGAITILLTDR 633 T AGAIT+LLTDR Sbjct: 132 TTVLLLLSLPVLAGAITMLLTDR 154 Score = 36.7 bits (81), Expect = 0.48 Identities = 17/35 (48%), Positives = 17/35 (48%) Frame = +3 Query: 219 WRIWKLIXXXXXXXXXXXIPTNK*YKILTPTPLPY 323 W IWKLI P NK YKILT PL Y Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTY 62 >UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I - Aplidium nordmanni Length = 227 Score = 67.7 bits (158), Expect = 2e-10 Identities = 73/208 (35%), Positives = 85/208 (40%), Gaps = 1/208 (0%) Frame = +1 Query: 28 HKDIGTL-YXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 204 HKD GTL + L G +IG QI VTA A Sbjct: 1 HKDXGTLXFXFXXWSAXFXGXXFXLXXRXXLSXXGQVIGXGQIXXVGVTAXALVMIFFFV 60 Query: 205 XXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYP 384 L PL + AP +A PR+ N+ F + G G VYP Sbjct: 61 MPTLXGGFGXXLXPLXVGAPXMAXPRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYP 120 Query: 385 PLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGI 564 P SS +AH +V L IF LHL GISS ++ LF Sbjct: 121 PXSSGLAHSSGAVDLGIFXLHLAGISSXLGSMNFLVTLGNMKXKGLNYGNFSLFCWXXVX 180 Query: 565 TAFXXXXXXXXXAGAITILLTDRNLXTS 648 A AIT+L R S Sbjct: 181 XXXXLILSXPVLAAAITMLXXXRXXNXS 208 >UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyveromyces thermotolerans|Rep: Putative DNA endonuclease - Kluyveromyces thermotolerans (Yeast) Length = 542 Score = 64.1 bits (149), Expect = 3e-09 Identities = 40/124 (32%), Positives = 54/124 (43%), Gaps = 2/124 (1%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXX 186 +YSTN KDI LY EL PG+ L G+ Q++N +V HA Sbjct: 6 LYSTNAKDIAILYFIFAIFCGMAGTAMSVIIRLELAAPGNQYLGGNHQLFNVLVVGHAVL 65 Query: 187 XXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT 366 N L+PL++ A D++F R+NNI F +V +GAGT Sbjct: 66 MIFFLVMPALIGGFGNYLLPLMIGASDMSFARLNNISFWLLPPALVCLVTSTLVESGAGT 125 Query: 367 G*TV 378 G TV Sbjct: 126 GWTV 129 >UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacterineae|Rep: Cytochrome-c oxidase - Anaeromyxobacter sp. Fw109-5 Length = 596 Score = 63.3 bits (147), Expect = 5e-09 Identities = 42/165 (25%), Positives = 62/165 (37%), Gaps = 1/165 (0%) Frame = +1 Query: 154 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXX 333 Y I T H N L+PL++ A D+AFPR+N F Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSFWTFLLSQLLVL 145 Query: 334 XRXIVXNG-AGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXX 510 G AG G T Y PLS+N+ G L + ++ + G+SS Sbjct: 146 ASFFAPLGSAGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLR 205 Query: 511 XXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLXT 645 ++ +LPL + + +TA A +LL DR+ T Sbjct: 206 APGMTYMRLPLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGT 250 >UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I - Aquifex aeolicus Length = 485 Score = 62.1 bits (144), Expect = 1e-08 Identities = 46/175 (26%), Positives = 67/175 (38%) Frame = +1 Query: 124 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFX 303 PG + D + YN ++T H N L+PL++ A D+AFPR+N + + Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLNALSWW 61 Query: 304 XXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXX 483 I N T T YPP S N + L +F +HL G SS Sbjct: 62 AFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN--NDAGVTALYVFVMHLLGASSIATAVN 119 Query: 484 XXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 +F + LFV + AGA+T+L D+ L T+ Sbjct: 120 FLVTYITMRAPGYTFFKTNLFVHTLIAANVIQLVGVPSLAGAVTMLFLDKYLGTN 174 >UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena gracilis|Rep: Cytochrome oxidase subunit I - Euglena gracilis Length = 495 Score = 60.5 bits (140), Expect = 3e-08 Identities = 49/216 (22%), Positives = 83/216 (38%), Gaps = 6/216 (2%) Frame = +1 Query: 19 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI----GDDQIYNTIVTAHAXX 186 +T+HK IG LY EL G I + IYN +T H Sbjct: 15 TTSHKIIGILYGYMGYIAGILGYIISMLIRMELNTQGLAIVRKVKEVTIYNNWITIHGLI 74 Query: 187 XXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRF-XXXXXXXXXXXXRXIVXNGAG 363 N L+P+++ +++ PR+N I F ++ Sbjct: 75 MLFVFIMPVGIGFYGNYLIPMLIGTSELSMPRMNGISFWMLIVGVVIFVISNVLMSKPIS 134 Query: 364 TG*TVYPPLSSNIAHR-GRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLP 540 +G T+YPPLS+ A G ++ L++ +H+ GISS +F + Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISSTIGSVNYITTNKYNRHVGLTFMNIN 194 Query: 541 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 ++ ++ +T+ AIT LL DRN+ ++ Sbjct: 195 IYNFSIIVTSILLIGSLPILGVAITGLLLDRNINST 230 >UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38; Bacteria|Rep: Cytochrome c oxidase subunit I type - Anaeromyxobacter sp. Fw109-5 Length = 555 Score = 60.1 bits (139), Expect = 5e-08 Identities = 46/186 (24%), Positives = 68/186 (36%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXX 192 + + +HK IG ++ EL PG I D YN + T H Sbjct: 30 LLTQDHKRIGVMFLVATTISFALGGFFALLIRLELLTPGPTIMDAMTYNRMFTLHGVVMI 89 Query: 193 XXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG* 372 N L+P+++ A D+AFP++N + F +V GA TG Sbjct: 90 FLFMIPAIPSGFGNFLLPIMIGAKDVAFPKLNLLSFYVYLAGAVVALF-GMVQGGADTGW 148 Query: 373 TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 552 T Y P S+ + V L F L G SS + +LPLFV Sbjct: 149 TFYTPYSTTTITKVVPVLLGAFIL---GFSSILTGLNFIVTTHTMRAPGMGWTRLPLFVW 205 Query: 553 AVGITA 570 ++ T+ Sbjct: 206 SIYATS 211 >UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1; Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III - Aeropyrum pernix Length = 815 Score = 60.1 bits (139), Expect = 5e-08 Identities = 50/212 (23%), Positives = 74/212 (34%), Gaps = 1/212 (0%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXX 192 I +T+HKDIG LY +L P S Y VT H Sbjct: 16 ITTTDHKDIGLLYLVTSIAFLLIAGSLALLFRVQLAIPKSNFLTGDAYYEAVTVHGLIML 75 Query: 193 XXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGA-GTG 369 N +VPL + A D+AFPR+N + + +GA G Sbjct: 76 LWFASPFAFGLA-NYIVPLQIGARDLAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVG 134 Query: 370 *TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 549 T+Y PL++ I G + LA ++ L +S + ++P+F Sbjct: 135 WTLYAPLTARIYTPGIGLDLAALAIFLFSLSVTLGTINFLVTIAAMRAPGIGWFKMPMFT 194 Query: 550 *AVGITAFXXXXXXXXXAGAITILLTDRNLXT 645 ++ T +LL DRNL T Sbjct: 195 WSILFTVILMLWAFPPLMVGGALLLLDRNLGT 226 >UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase, subunit I - Myxococcus xanthus (strain DK 1622) Length = 556 Score = 58.8 bits (136), Expect = 1e-07 Identities = 50/209 (23%), Positives = 75/209 (35%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXX 192 + + +HK IG ++ EL PG I D YN T H Sbjct: 37 LLTVDHKRIGLMFLFWVLLFFLVGGIFALLIRVELLTPGPTIMDAMTYNRTFTLHGLVMI 96 Query: 193 XXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG* 372 N ++PL+L A D+AFPR+N + ++ G TG Sbjct: 97 FLFMIPAIPAVFGNFMLPLMLGAKDVAFPRLNLLSLYIYLAGAVLALW-GMLNGGLDTGW 155 Query: 373 TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 552 T Y P S AH +V +F + G SS ++ ++PLFV Sbjct: 156 TFYTPYS---AHTTTTVAPVLFGAFIIGFSSIVTGINFIVTCHTMRAPGITWFKMPLFVW 212 Query: 553 AVGITAFXXXXXXXXXAGAITILLTDRNL 639 A+ T+ G + +L+T NL Sbjct: 213 AIYATS-CIQVLATPVIGLLLVLVTVENL 240 >UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4; Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1 - Halobacterium salinarium (Halobacterium halobium) Length = 593 Score = 58.4 bits (135), Expect = 1e-07 Identities = 48/212 (22%), Positives = 76/212 (35%), Gaps = 2/212 (0%) Frame = +1 Query: 19 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 198 + +HKDIG LY EL + +YN ++T+H Sbjct: 65 TVDHKDIGILYGVYGTIAFAWGGVSVLLMRTELATSSETLISPSLYNGLLTSHGITMLFL 124 Query: 199 XXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXN--GAGTG* 372 N +PL++ A D+AFPRIN I F ++ A T Sbjct: 125 FGTPMIAAFG-NYFIPLLIDADDMAFPRINAIAFWLLPPGAILIWSGFLIPGIATAQTSW 183 Query: 373 TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 552 T+Y PLS ++ +V + + LHL G+S+ + L +F Sbjct: 184 TMYTPLSLQMS--SPAVDMMMLGLHLTGVSATMGAINFIATIFTERGEDVGWPDLDIFSW 241 Query: 553 AVGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 + + A+ +LL DRN T+ Sbjct: 242 TMLTQSGLILFAFPLFGSALIMLLLDRNFGTT 273 >UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1; Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit 1 - Beggiatoa sp. PS Length = 525 Score = 57.6 bits (133), Expect = 2e-07 Identities = 51/213 (23%), Positives = 77/213 (36%), Gaps = 2/213 (0%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDD-QIYNTIVTAHAXXX 189 I++T+HK +G LY EL G I DD +YNT + H Sbjct: 9 IFTTDHKRVGILYLIGSIAAFAVAGIMAMLIRLELSQIGPTITDDPSVYNTWLYFHGAAM 68 Query: 190 XXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG 369 N +PL++ A D+AFPR+N + + + Sbjct: 69 ILAFQIPALTGFFANYFIPLMIGAKDVAFPRVNALSVWLFYAGVLVALTTFFIPDPPDIM 128 Query: 370 *TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 549 T YPP S I H + FS+ L G +S +++L +FV Sbjct: 129 WTGYPPYSI-ITH--GNTAFYTFSVLLLGFASILGGVNFLTTVTFMRAPGIGWNKLNIFV 185 Query: 550 *AVGITAFXXXXXXXXXAG-AITILLTDRNLXT 645 A + AF G A+T+L D+ + T Sbjct: 186 WAT-LAAFVLQLIFVPVLGTAVTMLTFDKYIGT 217 >UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase polypeptide I) (Quinol oxidase aa3-600, subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45; Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase polypeptide I) (Quinol oxidase aa3-600, subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus subtilis Length = 649 Score = 56.8 bits (131), Expect = 4e-07 Identities = 45/207 (21%), Positives = 68/207 (32%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXX 192 I + +HK +G +Y A+L P + D YN I T H Sbjct: 48 ITTVDHKKLGIMYIISAVIMLFRGGVDGLMMRAQLALPNNSFLDSNHYNEIFTTHGTIMI 107 Query: 193 XXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG* 372 N +VPL + A D+AFP +NN+ F ++ G Sbjct: 108 IFMAMPFLIGLI-NVVVPLQIGARDVAFPYLNNLSFWTFFVGAMLFNISFVIGGSPNAGW 166 Query: 373 TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 552 T Y PL+SN G + L + GI + + ++P+F Sbjct: 167 TSYMPLASNDMSPGPGENYYLLGLQIAGIGTLMTGINFMVTILKMRTKGMTLMRMPMFTW 226 Query: 553 AVGITAFXXXXXXXXXAGAITILLTDR 633 IT A+ +L DR Sbjct: 227 TTLITMVIIVFAFPVLTVALALLSFDR 253 >UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; Alveolata|Rep: Cytochrome c oxidase subunit 1 - Plasmodium falciparum Length = 476 Score = 56.8 bits (131), Expect = 4e-07 Identities = 47/215 (21%), Positives = 79/215 (36%), Gaps = 4/215 (1%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQI--YNTIVTAHAX 183 I + NHK +G Y EL + +I + + YN I T H Sbjct: 9 ITNCNHKTLGLYYLWFSFLFGSYGFLLSVILRTELYSSSLRIIAQENVNLYNMIFTIHGI 68 Query: 184 XXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAG 363 N +P++ +P++A+PRIN+I G G Sbjct: 69 IMIFFNIMPGLFGGFGNYFLPILCGSPELAYPRINSISLLLQPIAFVLVILSTAAEFGGG 128 Query: 364 TG*TVYPPLSSNIAHRGR-SVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLP 540 TG T+YPPLS+++ +V + IF L + G++S + L Sbjct: 129 TGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVASIMSSLNFITTVMHLRAKGLTLGILS 188 Query: 541 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNLXT 645 + ++ IT+ G + +LL+D + T Sbjct: 189 VSTWSLIITSGMLLLTLPVLTGGVLMLLSDLHFNT 223 >UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces maris DSM 8797 Length = 754 Score = 56.4 bits (130), Expect = 6e-07 Identities = 46/212 (21%), Positives = 73/212 (34%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXX 192 + + +HK IG +Y +L P + +++N + T H Sbjct: 27 VSTLDHKRIGIMYILTAVFYLAVGGFEALLMRIQLAFPNNTFLSPEMFNQLFTMHGTTMV 86 Query: 193 XXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG* 372 N VPL++ A D+AFPR+N+ F + + G Sbjct: 87 FLVGMPVLTGFA-NYFVPLMIGARDVAFPRLNSFGFWMFFFGAALLHFSFLTGSAPNAGW 145 Query: 373 TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 552 Y PLSS + V I L + GI S S ++PLFV Sbjct: 146 FSYVPLSSKAYSSLQGVDYWIIGLLIMGIGSVSGAINIFATIINLRAPGMSLQRVPLFVW 205 Query: 553 AVGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 + + A A+ +LL DR L ++ Sbjct: 206 MMLMQAILIILALPALNSALAMLLIDRWLGSA 237 >UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Theileria|Rep: Cytochrome c oxidase subunit 1 - Theileria parva Length = 481 Score = 56.4 bits (130), Expect = 6e-07 Identities = 48/212 (22%), Positives = 75/212 (35%), Gaps = 3/212 (1%) Frame = +1 Query: 19 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDD--QIYNTIVTAHAXXX 189 S NHK IG Y EL G +I D +IYN + T H Sbjct: 14 SGNHKIIGISYLWLAYWFGMIGFYMSVLIRTELSMSGLKIITMDTLEIYNLLFTLHGLIM 73 Query: 190 XXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG 369 N L P++L D+ +PR+N + G+GTG Sbjct: 74 VFFNIMTGLFGGIGNYLYPVLLGYCDVVYPRVNLYSLLFQPIGFVLVVSSIYLEIGSGTG 133 Query: 370 *TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 549 T+YPPLS+++++ G + IF L GI+S D++ Sbjct: 134 WTLYPPLSTSLSNVG--IDFIIFGLLAAGIASTLSSVNFITTFTSVKTIGFVIDRISPAA 191 Query: 550 *AVGITAFXXXXXXXXXAGAITILLTDRNLXT 645 ++ +T+F ++ DR+ T Sbjct: 192 WSIVLTSFLLLLSLPVVTAVFLMVFLDRHYNT 223 >UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; Actinobacteria (class)|Rep: Cytochrome c oxidase subunit 1 - Corynebacterium glutamicum (Brevibacterium flavum) Length = 584 Score = 54.8 bits (126), Expect = 2e-06 Identities = 46/208 (22%), Positives = 71/208 (34%), Gaps = 1/208 (0%) Frame = +1 Query: 19 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 198 +T+HK +G +Y AEL PG ++ +N + T H Sbjct: 35 TTDHKQLGIMYIIMSFSFFFLGGLMALLIRAELFTPGLQFLSNEQFNQLFTMHGTVMLLL 94 Query: 199 XXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGT-G*T 375 N ++PL + APD+AFPR+N F + GA G T Sbjct: 95 YGTPIVWGFA-NYVLPLQIGAPDVAFPRLNAFGFWITTVGGVAMLTGFLTPGGAADFGWT 153 Query: 376 VYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 555 +Y PLS I G + I + GI S + ++P+F Sbjct: 154 MYSPLSDAIHSPGLGSDMWIVGVGATGIGSVASAINMLTTILCLRAPGMTMFRMPIFTWN 213 Query: 556 VGITAFXXXXXXXXXAGAITILLTDRNL 639 + + + A +L DR L Sbjct: 214 IFVVSVLALLIFPLLLAAALGVLYDRKL 241 >UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; Bilateria|Rep: Cytochrome c oxidase subunit I - Schistosoma mansoni (Blood fluke) Length = 609 Score = 53.6 bits (123), Expect = 4e-06 Identities = 54/210 (25%), Positives = 74/210 (35%) Frame = +1 Query: 19 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 198 S +HK IG LY L +P + +YN +VT H Sbjct: 107 SLDHKRIGLLYFVFGLWGGFIGLGLSLLIRLNLCDPYYNLVSVDVYNYLVTNHGVAMIFF 166 Query: 199 XXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*TV 378 N +P+ L D+ PR+N++ + G G G T+ Sbjct: 167 FLMPILIGGFGNYFLPIFLCLDDLLLPRLNSLSLWLMVPSIFYMELS--LYYGCGIGWTL 224 Query: 379 YPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 558 YPPLS G V +FSLHL G+SS SF+ + V A Sbjct: 225 YPPLSI-WEGSGFGVDYLMFSLHLAGVSS----LIGSVNFISTIFSRLSFN-CSIIVWAY 278 Query: 559 GITAFXXXXXXXXXAGAITILLTDRNLXTS 648 T+ A IT+LL DRN T+ Sbjct: 279 LFTSVLLLLSLPVLASGITMLLFDRNFGTA 308 >UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp. RS-1 Length = 641 Score = 53.2 bits (122), Expect = 5e-06 Identities = 46/209 (22%), Positives = 69/209 (33%) Frame = +1 Query: 19 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 198 +T+HK IG +Y +LG P + +YN + T H Sbjct: 28 TTDHKRIGIMYLVSAFVFFLIGGIEALLMRIQLGVPDNTFLTPDVYNQMFTMHGTTMIFL 87 Query: 199 XXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*TV 378 N +VPL++ A D+AFPR+N + V G Sbjct: 88 GLMPLNVGLG-NYMVPLMIGARDMAFPRLNALSIWLFIFGGLMLYVSFFVGGAPNVGWFA 146 Query: 379 YPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 558 Y PL+ V I + L G++S + +++PLFV Sbjct: 147 YAPLTQKQFAPTAGVDYWIVGIGLTGVASIAGALNFIVTILNMRAPGMTLNRMPLFVWMQ 206 Query: 559 GITAFXXXXXXXXXAGAITILLTDRNLXT 645 + AF A LL DR+ T Sbjct: 207 LVVAFILIFAFPVLTVATIQLLFDRHFGT 235 >UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase subunit I - Myrmarachne sp. G FSC-2006 Length = 129 Score = 52.4 bits (120), Expect = 9e-06 Identities = 25/41 (60%), Positives = 28/41 (68%) Frame = +1 Query: 343 IVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLXGISS 465 +V G G G TVYPPL+S + H G SV AIFSLHL G SS Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52 >UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; Bacteria|Rep: Cytochrome c oxidase subunit I - Synechococcus sp. (strain CC9311) Length = 564 Score = 52.0 bits (119), Expect = 1e-05 Identities = 49/214 (22%), Positives = 73/214 (34%), Gaps = 3/214 (1%) Frame = +1 Query: 16 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 195 ++T+ K IG Y EL P + + D +YN + T H Sbjct: 32 FNTDAKVIGIQYIATAMLFLLVGGLLAMIVRGELITPPADLVDPSVYNGLYTMHGTVMLF 91 Query: 196 XXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNG-AGTG* 372 N L+P ++ APD+AFP++N F G A +G Sbjct: 92 LFLFPILNGFN-NLLIPTMIGAPDMAFPKLNAAAFWLVPVFSIVLMGSFFAPGGPASSGW 150 Query: 373 TVYPPLS--SNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 546 YPP+S + + H L I ++ L GISS F ++P+F Sbjct: 151 WSYPPMSLQNPLGHFINGEFLWILAVALSGISSIMGAINFVTTIIRMRAPGMGFFRMPVF 210 Query: 547 V*AVGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 V G +LL D + TS Sbjct: 211 VWTAWAAQTIQLIGLPALTGGAVMLLFDLSFGTS 244 >UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxidase, subunit 1; n=2; Thermoprotei|Rep: Heme/copper-type cytochrome/quinol oxidase, subunit 1 - Cenarchaeum symbiosum Length = 508 Score = 52.0 bits (119), Expect = 1e-05 Identities = 50/208 (24%), Positives = 75/208 (36%), Gaps = 1/208 (0%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS-LIGDDQIYNTIVTAHAXXX 189 ++ST+H D+G LY AEL PG+ I D +N + T H Sbjct: 15 MFSTHHTDVGLLYLISSLGFLFLGGALALLIRAELFFPGTQFIADSMTFNRMFTVHG-TT 73 Query: 190 XXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG 369 N VP+++ D+A+P++N I F + T Sbjct: 74 LIFLFILPFASAVGNYFVPIMVRYKDMAYPKLNAIAFWMIPPAGALVWLGFADFSWYAT- 132 Query: 370 *TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 549 PP S I+ G + + IF L + GISS S Q+PL Sbjct: 133 ----PPYSV-ISAPGPAADMWIFGLKILGISSILGSINFIVTILKCKHPDMSLGQVPLLA 187 Query: 550 *AVGITAFXXXXXXXXXAGAITILLTDR 633 + ++ A A+ +LLTDR Sbjct: 188 WSYLSSSLIVLVALPTFAAALLMLLTDR 215 >UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1); n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) - Synechocystis sp. (strain PCC 6803) Length = 551 Score = 51.6 bits (118), Expect = 2e-05 Identities = 51/211 (24%), Positives = 68/211 (32%) Frame = +1 Query: 16 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 195 + +HK IG Y EL P ++YN ++T H Sbjct: 23 FCVDHKVIGIQYLVTSFLFFFIGGSFAEAMRTELATPSPDFVQPEMYNQLMTLHGTIMIF 82 Query: 196 XXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*T 375 N L+PL++ D+AFPR+N + F V G T Sbjct: 83 LWIVPAGAAFA-NYLIPLMVGTEDMAFPRLNAVAFWLTPPGGILLISSFFV-GAPQAGWT 140 Query: 376 VYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 555 YPPLS G L I SL L G SS +PLF A Sbjct: 141 SYPPLSLLSGKWGEE--LWILSLLLVGTSSILGAINFVTTILKMRIKDMDLHSMPLFCWA 198 Query: 556 VGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 + T+ A A+ +L D TS Sbjct: 199 MLATSSLILLSTPVLASALILLSFDLIAGTS 229 >UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC 1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus thermophilus|Rep: Cytochrome c oxidase polypeptide I+III (EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) Length = 791 Score = 51.6 bits (118), Expect = 2e-05 Identities = 44/211 (20%), Positives = 69/211 (32%), Gaps = 1/211 (0%) Frame = +1 Query: 19 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 198 + +HK IG +Y +L P + + YN I+T H Sbjct: 21 TVDHKKIGLMYTATAFFAFALAGVFSLLIRTQLAVPNNQFLTGEQYNQILTLHGATMLFF 80 Query: 199 XXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGA-GTG*T 375 N +VPL+L A D+A PR+N + GA G T Sbjct: 81 FIIQAGLTGFGNFVVPLMLGARDVALPRVNAFSYWAFLGAIVLALMSYFFPGGAPSVGWT 140 Query: 376 VYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 555 Y P S A V + ++ L G SS S ++P++V + Sbjct: 141 FYYPFS---AQSESGVDFYLAAILLLGFSSLLGNANFVATIYNLRAQGMSLWKMPIYVWS 197 Query: 556 VGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 V + A ++L +R + S Sbjct: 198 VFAASVLNLFSLAGLTAATLLVLLERKIGLS 228 >UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Blastopirellula marina DSM 3645|Rep: Cytochrome c oxidase subunit I - Blastopirellula marina DSM 3645 Length = 595 Score = 50.4 bits (115), Expect = 4e-05 Identities = 41/170 (24%), Positives = 64/170 (37%), Gaps = 4/170 (2%) Frame = +1 Query: 148 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXX 327 + Y +VT HA N L+PL++ A D+AFP +N + + Sbjct: 86 EFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSYWFMWPAFFF 145 Query: 328 XXXRXIV-XNGAGTG*TVYPPLS---SNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXX 495 +GA G T YPPLS ++ G + L + + G+SS Sbjct: 146 FGGAFFCDGHGAAAGWTSYPPLSDMTTSAPSSGAAQTLWLLGVTTVGVSSMLGSVNYMTT 205 Query: 496 XXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLXT 645 + +LPL + A+ ITA A ++L DR + T Sbjct: 206 IIQMRAPGMTMFRLPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGT 255 >UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Halobacteriaceae|Rep: Cytochrome c oxidase subunit I - Haloarcula marismortui (Halobacterium marismortui) Length = 854 Score = 50.0 bits (114), Expect = 5e-05 Identities = 45/212 (21%), Positives = 71/212 (33%), Gaps = 2/212 (0%) Frame = +1 Query: 19 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 198 +TNHKDIG LY EL + G+ + YN V+ H Sbjct: 19 TTNHKDIGVLYLITALFFLVFGGVLALLFRLELISSGADLLGSMGYNQAVSTHGLLMVFW 78 Query: 199 XXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*TV 378 N LVPL + A D+AFPR+N + + G T+ Sbjct: 79 FISPFAFGFA-NYLVPLQIGADDLAFPRLNALSYWLYLFSGILMGVSFFQGTTFAGGWTM 137 Query: 379 YPPLS--SNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 552 Y PL+ + I G + +L + + +P+F Sbjct: 138 YAPLNTPAYIPGEGLGATSVVLALIMFTAAVTLGSVNFLTTMYRMRAEGLRMRDIPIFSL 197 Query: 553 AVGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 ++ +T + A+ IL +D L T+ Sbjct: 198 SINLTVWMMLFAFAALLAALMILASDHILGTT 229 >UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; cellular organisms|Rep: Cytochrome C oxidase subunit I - Rhizobium loti (Mesorhizobium loti) Length = 623 Score = 48.8 bits (111), Expect = 1e-04 Identities = 48/210 (22%), Positives = 70/210 (33%), Gaps = 1/210 (0%) Frame = +1 Query: 19 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS-LIGDDQIYNTIVTAHAXXXXX 195 + +HK IG Y +L P + IG D+ YN I T H Sbjct: 26 TVDHKIIGRRYTVTAFVFLALGGVLALLMRLQLAQPEARFIGPDR-YNQIFTMHGSNMMF 84 Query: 196 XXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*T 375 LVPL++ IAFPR+N + V G G Sbjct: 85 LFAVPVMQAMAIY-LVPLMVGTRHIAFPRLNAFSYWMYLAGGLLLWIAFAVDTGPDIGWF 143 Query: 376 VYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 555 Y PLS G+ + + +S+ S D++PLFV + Sbjct: 144 AYVPLSGPQYAAGKRADIWAQMITFTEVSALAIAVEIVVTVFKQRAPGMSLDRIPLFVWS 203 Query: 556 VGITAFXXXXXXXXXAGAITILLTDRNLXT 645 + +T+F A T L+ DR + T Sbjct: 204 MLVTSFLVILAMPAIMIASTSLILDRLVGT 233 >UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3) subunit 1); n=20; cellular organisms|Rep: Alternative Cytochrome c oxidase polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3) subunit 1) - Microscilla marina ATCC 23134 Length = 635 Score = 45.2 bits (102), Expect = 0.001 Identities = 40/173 (23%), Positives = 64/173 (36%), Gaps = 4/173 (2%) Frame = +1 Query: 142 DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXX 321 + + Y +VT H N L+PL + A D+A +N + + Sbjct: 98 EPEFYLALVTMHGTIMVFFVLTAGLSGTFSNFLIPLQIGARDMASGFMNMLSYWFFFGSS 157 Query: 322 XXXXXRXIVXNGAGTG*-TVYPPLSS---NIAHRGRSVXLAIFSLHLXGISSXXXXXXXX 489 + G +G +YPPLS+ ++ G + + + S+ L IS Sbjct: 158 VIMFASIFLETGPASGSWVIYPPLSALPQAMSGSGAGMTMWLISMALFIISVLLGGINYI 217 Query: 490 XXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLXTS 648 SF +LPL + A ITA A +L+ DR+L TS Sbjct: 218 TTVINLRVKGMSFTRLPLTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTS 270 >UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit I - Pachymerium ferrugineum Length = 219 Score = 45.2 bits (102), Expect = 0.001 Identities = 33/123 (26%), Positives = 40/123 (32%) Frame = +3 Query: 276 PTNK*YKILTPTPLPYIINFKXNCXKWCRNRMNSLPPTFI*YRT*RKIRXSCYFFTTFXX 455 P NK +KIL TPL Y N C K C + +NSLP Y T R +F T Sbjct: 79 PPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPTSCS 138 Query: 456 XXXXXXXXXXXXXXXXXTXXXXXXXXXXXXCMSCRDYSXXXXXXTTCFSWSYYNIINRSK 635 CM +YS + S+YNI K Sbjct: 139 SVFNSSLNQLYYNNHQYARYSNNPWTNPSVCMKSNNYSCTSTSFSPSIGSSHYNITYWPK 198 Query: 636 LXY 644 Y Sbjct: 199 PKY 201 >UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 - Tetrahymena pyriformis Length = 698 Score = 44.8 bits (101), Expect = 0.002 Identities = 28/101 (27%), Positives = 40/101 (39%), Gaps = 2/101 (1%) Frame = +1 Query: 4 RK*IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAH 177 +K +Y+ NHK I Y EL +P S GD Y +VTAH Sbjct: 52 KKYVYTINHKRIAINYLYFSMVTGLSGAALATMIRMELAHPESPFFKGDSLRYLQVVTAH 111 Query: 178 AXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRF 300 N L+P + + D+A+PR+N+I F Sbjct: 112 GLIMVFFVVVPILFGGFANFLIPYHVGSKDVAYPRLNSIGF 152 >UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I; n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase, subunit I - Chromobacterium violaceum Length = 680 Score = 44.4 bits (100), Expect = 0.002 Identities = 47/210 (22%), Positives = 67/210 (31%), Gaps = 3/210 (1%) Frame = +1 Query: 19 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNP-GSLIG--DDQIYNTIVTAHAXXX 189 S +HK IG +Y +L G G + Y+ I TAH Sbjct: 52 SVDHKKIGVMYIIVAMIMLLRGFADALMMRTQLAMATGGAHGVFPPEHYDQIFTAHGVIM 111 Query: 190 XXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG 369 N +VPL + A D+AFP +N++ F V N A TG Sbjct: 112 IIFMAMPFMTGLM-NIVVPLQIGARDVAFPFLNSLSFWLLVSAVILVNLSLGVGNFARTG 170 Query: 370 *TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 549 YPPL+ V I++L + GI + +P+F Sbjct: 171 WVAYPPLAELGFSPDVGVDYYIWALQISGIGTTLTAINFLVTVIKMRAPGMKLMDMPIFT 230 Query: 550 *AVGITAFXXXXXXXXXAGAITILLTDRNL 639 GA+ +L DR L Sbjct: 231 WTCTWANVLIATSFPILTGALAMLALDRYL 260 >UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I - Roseovarius nubinhibens ISM Length = 818 Score = 44.0 bits (99), Expect = 0.003 Identities = 36/184 (19%), Positives = 60/184 (32%) Frame = +1 Query: 19 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 198 + NH D+G ++ A+L P S + YN + T H Sbjct: 26 TVNHTDLGRMFLTVAVFFFVVGGVLAMLIRAQLATPRSAFLGPEHYNQVFTMHGTIMMFL 85 Query: 199 XXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*TV 378 L+P +L + D+AFPR+ F + +G + Sbjct: 86 FAIPVFEGFAVY-LLPKLLGSRDLAFPRLTAYGFWCYVFGGSMMIFSLLWGIAPDSGWFM 144 Query: 379 YPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 558 YPPLSS + G + + + IS+ S ++P+F Sbjct: 145 YPPLSSTLGAPGINSDFWLIGITFVEISAIAAAVEITVTVLRYRAPGMSLSKMPIFAWYA 204 Query: 559 GITA 570 +TA Sbjct: 205 LVTA 208 >UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I - Celatoblatta vulgaris Length = 134 Score = 42.7 bits (96), Expect = 0.007 Identities = 18/34 (52%), Positives = 21/34 (61%) Frame = +3 Query: 549 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLXYII 650 M C +YS +TC WSYYN IN SKL YI+ Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYIL 117 >UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c oxidase polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3) subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c oxidase polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum Length = 591 Score = 42.3 bits (95), Expect = 0.010 Identities = 48/217 (22%), Positives = 72/217 (33%), Gaps = 5/217 (2%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSL-IGDDQIYNTIVTAHAXXX 189 ++S + K I Y +LG PG+ D Y +T H Sbjct: 33 VFSQDAKVIAIQYSLTASAIGLVALVLSWLMRLQLGFPGTFSFIDANQYLQFITMHGMIM 92 Query: 190 XXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNG-AGT 366 N L+PL++ A D+ FP +N + + V G G Sbjct: 93 VIYLLTALFLGGFGNYLIPLMVGARDMVFPYVNMLSYWVYLLAVLVLASAFFVPGGPTGA 152 Query: 367 G*TVYPP--LSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLP 540 G T+YPP + S + + L + SL L I + +LP Sbjct: 153 GWTLYPPQAILSGTPGQDWGIVLMLSSLILFIIGFTMGGLNYVVTVLQARTRGMTLMRLP 212 Query: 541 LFV*AV-GITAFXXXXXXXXXAGAITILLTDRNLXTS 648 L V + T G++ +LL DR L TS Sbjct: 213 LTVWGIFTATVMALLAFPALFVGSVMLLL-DRLLGTS 248 >UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis Length = 622 Score = 42.3 bits (95), Expect = 0.010 Identities = 37/210 (17%), Positives = 67/210 (31%) Frame = +1 Query: 19 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 198 + +HK I LY +L P + Q YN ++T H Sbjct: 21 TVDHKKIAILYLVAGGFFFLVGGIEAMFIRIQLAKPENAFLSAQAYNEVMTMHGTTMIFL 80 Query: 199 XXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*TV 378 N +VPL + A D++FP +N + F + G T Sbjct: 81 AAMPLLFALM-NAVVPLQIGARDVSFPFLNALGFWLFFFGHIFLNLSWFLGGAPDAGWTS 139 Query: 379 YPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 558 Y LS + +G + + L + G+ + ++ +LPLF Sbjct: 140 YASLS--LHSKGHGIDFFVLGLQISGLGTLIAGINFLATIINMRAPGMTYMRLPLFTWTT 197 Query: 559 GITAFXXXXXXXXXAGAITILLTDRNLXTS 648 + + + +++ DR T+ Sbjct: 198 FVASALILFAFPPLTVGLALMMLDRLFGTN 227 >UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep: Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase BO(3) subunit 1) - Pseudomonas putida Length = 672 Score = 41.1 bits (92), Expect = 0.022 Identities = 46/212 (21%), Positives = 67/212 (31%), Gaps = 5/212 (2%) Frame = +1 Query: 19 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAEL-----GNPGSLIGDDQIYNTIVTAHAX 183 + +HK IG +Y +L G+ G L + Y+ I TAH Sbjct: 51 TVDHKKIGVMYIIVAMVMLLRGFADAIMMRTQLAAATGGSEGYL--PPEHYDQIFTAHGV 108 Query: 184 XXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAG 363 N VPL + A D+AFP +N++ F V A Sbjct: 109 IMIIFMAMPFFTGLM-NLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAK 167 Query: 364 TG*TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 543 TG YPPL+ G V I++L L G+ + +P+ Sbjct: 168 TGWVAYPPLAGIQYSPGVGVDYYIWALQLSGLGTTLTGVNFLVTVMKMRAPGMKLMDMPI 227 Query: 544 FV*AVGITAFXXXXXXXXXAGAITILLTDRNL 639 F A+ +L DR L Sbjct: 228 FTWTCTWANVLIVASFPILTAALALLTVDRYL 259 >UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteobacteria|Rep: Quinol oxidase subunit I - Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides) Length = 825 Score = 40.7 bits (91), Expect = 0.030 Identities = 31/176 (17%), Positives = 59/176 (33%) Frame = +1 Query: 19 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 198 + NH D+G ++ A+L +P S + Y + T H Sbjct: 26 TVNHTDLGRMFLGASVVFFLIGGILAMLIRAQLASPRSAFVGAETYAQLFTMHGTIMMFL 85 Query: 199 XXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*TV 378 L+P +L + D+A+PR++ F + +G + Sbjct: 86 FAIPMFEGLTIY-LLPKMLGSRDLAYPRLSAYGFWCYVLGGSMLIVALLAGIAPDSGWFM 144 Query: 379 YPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 546 YPPL+S + G + + + IS+ S D++P++ Sbjct: 145 YPPLASTLGSPGINSDFWLLGITFVEISAIAAAVEIVVTVLRFRAPGMSLDRMPIY 200 >UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4; cellular organisms|Rep: Cytochrome C oxidase subunit I /III - Pyrobaculum aerophilum Length = 800 Score = 40.7 bits (91), Expect = 0.030 Identities = 46/213 (21%), Positives = 72/213 (33%), Gaps = 6/213 (2%) Frame = +1 Query: 19 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGN--PGSLIGD---DQIYNTIVTAHAX 183 +TN IG LY + N PGS + D + +Y ++ H Sbjct: 11 TTNAHYIGILYILLSIINFVLAGIAAMYMRLTIANTPPGSPVQDPFNELLYTWFMSLHGL 70 Query: 184 XXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIV-XNGA 360 N LVP ++ APD+ +PRIN + F + +G Sbjct: 71 GMLLLFAMQAVAGAA-NILVPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGD 129 Query: 361 GTG*TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLP 540 G T+YPPLS+ + V L + + + G SS + Sbjct: 130 SIGWTLYPPLST--ISKSIGVDLILLGIIIAGFSSTLTGINFILTITRLRRPDIKMLDMS 187 Query: 541 LFV*AVGITAFXXXXXXXXXAGAITILLTDRNL 639 LF +V + A +LL +R+L Sbjct: 188 LFAWSVLAASMLMVTALPPLAAGAIMLLLERHL 220 >UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas eutropha (strain C71) Length = 703 Score = 40.3 bits (90), Expect = 0.039 Identities = 35/151 (23%), Positives = 55/151 (36%), Gaps = 2/151 (1%) Frame = +1 Query: 19 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAE--LGNPGSLIGDDQIYNTIVTAHAXXXX 192 ST+HK IG +Y A+ +G G + D + + + H Sbjct: 73 STDHKKIGIMYVVLALVMLTRAIAEAVLMRAQGAVGLGGGFLSSDH-FAQLFSTHGTIMI 131 Query: 193 XXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG* 372 N +VPL + A D+AFP +N+I +V + G Sbjct: 132 FFMAMPFLTGLI-NYVVPLQIGARDVAFPILNSISLWLTAAGAALVMISLVVGAFSTGGW 190 Query: 373 TVYPPLSSNIAHRGRSVXLAIFSLHLXGISS 465 YPP + + + G V I+SL L + S Sbjct: 191 FGYPPYTETLYNPGIGVDYWIWSLTLASLGS 221 >UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; Deinococcus|Rep: Cytochrome c oxidase, subunit I - Deinococcus radiodurans Length = 820 Score = 39.9 bits (89), Expect = 0.052 Identities = 33/146 (22%), Positives = 46/146 (31%) Frame = +1 Query: 19 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 198 +T+HK IG LY +L P + YN ++T HA Sbjct: 29 TTDHKKIGLLYIIVSILGFCLGGLLALAIRVQLALPEQTLLVGTTYNQVLTMHAAIMLFF 88 Query: 199 XXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*TV 378 N +PL L D+A PR+N G T Sbjct: 89 FLIPLGLFGFGNYFLPLQLGVRDVALPRLNTFAVWLFIASLILVVLGLFNGGAPSVGWTF 148 Query: 379 YPPLSSNIAHRGRSVXLAIFSLHLXG 456 Y PL+ + G SV + L+ G Sbjct: 149 YYPLTMDGNQTGVSVFMVAVILNGLG 174 >UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia cenocepacia MC0-3 Length = 1004 Score = 39.5 bits (88), Expect = 0.068 Identities = 41/209 (19%), Positives = 66/209 (31%) Frame = +1 Query: 19 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 198 + +HK IG Y +L P + + Y+++ T H Sbjct: 46 TVDHKRIGLRYIVTAFVFLLLGGVEALVMRIQLARPNATVLTPAQYDSLFTMHGVTMIFL 105 Query: 199 XXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*TV 378 N L PL+L + D+AFPR+ + + G Sbjct: 106 YALPVLSGFA-NYLWPLMLGSRDMAFPRLTAFSYWSFLFAGLFLYASFPLGAVPDGGWFN 164 Query: 379 YPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 558 Y PL+S G ++ + + L GIS+ S D+LP+ V Sbjct: 165 YVPLTSLDYSAGANIDIYGLGMILLGISTTGGAANFVVTLLRMRAHGMSIDRLPIIVWGT 224 Query: 559 GITAFXXXXXXXXXAGAITILLTDRNLXT 645 + + A +L DRN T Sbjct: 225 LTASVSNLVAVPSVSLAFLLLWLDRNAGT 253 >UniRef50_Q9B6E2 Cluster: Cytochrome c oxidase subunit I; n=2; Yarrowia lipolytica|Rep: Cytochrome c oxidase subunit I - Yarrowia lipolytica (Candida lipolytica) Length = 399 Score = 39.5 bits (88), Expect = 0.068 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHA 180 ++STN KDI LY EL N GS L G+ Q +N ++TAHA Sbjct: 11 LFSTNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHA 68 >UniRef50_P03876 Cluster: Putative COX1/OXI3 intron 2 protein; n=2; Saccharomycetaceae|Rep: Putative COX1/OXI3 intron 2 protein - Saccharomyces cerevisiae (Baker's yeast) Length = 854 Score = 39.1 bits (87), Expect = 0.090 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHA 180 +YSTN KDI LY EL PGS L G+ Q++N +V HA Sbjct: 6 LYSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHA 63 >UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia polymorpha|Rep: CoxI intron2 ORF - Marchantia polymorpha (Liverwort) Length = 802 Score = 38.7 bits (86), Expect = 0.12 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYN 159 ++STNHKDIGTLY EL PG+ I G+ Q+YN Sbjct: 9 LFSTNHKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYN 59 >UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; Bacteria|Rep: Cytochrome C oxidase subunit I - Symbiobacterium thermophilum Length = 628 Score = 37.5 bits (83), Expect = 0.28 Identities = 22/92 (23%), Positives = 36/92 (39%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXX 192 + + +HK IG +Y +L PG + + +N + T HA Sbjct: 24 VATVDHKRIGIMYGVTGFFFFLVGGLEAWIMRLQLARPGLEVVTARTFNALFTMHATTMI 83 Query: 193 XXXXXXXXXXXXXN*LVPLILXAPDIAFPRIN 288 N +PL++ A D+AFPR+N Sbjct: 84 FLGVMPLLSAFM-NYFLPLMIGARDVAFPRLN 114 >UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I; n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O ubiquinol oxidase subunit I - Carsonella ruddii (strain PV) Length = 606 Score = 37.5 bits (83), Expect = 0.28 Identities = 24/106 (22%), Positives = 41/106 (38%) Frame = +1 Query: 232 N*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHR 411 N ++PL + + D+AFP +N + F I+ A TG YPPLS Sbjct: 119 NIIIPLQIGSKDVAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLSEKTFSP 178 Query: 412 GRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 549 V +S+ + GI + F+++ +F+ Sbjct: 179 WVGVDYWNWSIQISGIGTIISSINFITTILKLRKKKLFFNKISIFM 224 >UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III; n=2; Thermoplasmatales|Rep: Cytochrome c oxidase polypeptide I/III - Picrophilus torridus Length = 841 Score = 37.5 bits (83), Expect = 0.28 Identities = 46/193 (23%), Positives = 63/193 (32%), Gaps = 11/193 (5%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG------SLIG----DDQIYNT 162 I++TNHK IG LY +L P S+ D YN Sbjct: 27 IFTTNHKQIGLLYILTSLFFFIGGGVMALLMRVQLAIPRYDLVKYSIFSGRFLDALQYNQ 86 Query: 163 IVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRX 342 +VT H L+PL + + D+ +PR+N + + Sbjct: 87 LVTIHGLTMLIWFLGPLGTGFGIY-LIPLAIGSRDMIYPRMNALGYWLFLFSGIMLWSGF 145 Query: 343 IVXNG-AGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXX 519 + G TG TVY PLSS A ++ L GI + Sbjct: 146 FLPGGNLDTGWTVYEPLSSFKFTPYLGADTAAAAVVLRGIGTIIASTEILATIFKARAKG 205 Query: 520 XSFDQLPLFV*AV 558 LPLFV AV Sbjct: 206 YRMMNLPLFVWAV 218 >UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase subunit I - Eutetramorium sp. BLF m1 Length = 201 Score = 37.1 bits (82), Expect = 0.36 Identities = 28/78 (35%), Positives = 36/78 (46%) Frame = +1 Query: 412 GRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXX 591 G L IFSL + S + D++ L ++ ITA Sbjct: 124 GSXXXLXIFSLXIXXXSXIFSAXNFISXIINMRHTMLTMDKISLLSWSILITAVLLLLSL 183 Query: 592 XXXAGAITILLTDRNLXT 645 AGAIT+LLTDRN+ T Sbjct: 184 PVLAGAITMLLTDRNMNT 201 >UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase subunit I - Planctomyces maris DSM 8797 Length = 606 Score = 36.3 bits (80), Expect = 0.64 Identities = 30/144 (20%), Positives = 49/144 (34%), Gaps = 3/144 (2%) Frame = +1 Query: 148 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXX 327 + Y + T HA N L+PL++ A D+AFP++N + + Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSYWFMWPAIAC 149 Query: 328 XXXRXIVXNGAGTG*TVYP---PLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXX 498 G G T YP L+ G + + + G SS Sbjct: 150 FGMSFKYAGGPAAGWTSYPVLADLAQAAPGSGTAQTYWLLGVTFVGFSSMMGSINYMTTI 209 Query: 499 XXXXXXXXSFDQLPLFV*AVGITA 570 +F +LP+ + + ITA Sbjct: 210 INMRAPGMTFFRLPMTIWGLFITA 233 >UniRef50_Q0R4Y4 Cluster: Maturase-like protein; n=2; Eukaryota|Rep: Maturase-like protein - Pellia epiphylla Length = 843 Score = 35.9 bits (79), Expect = 0.84 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYN 159 ++STNHKDIGT Y EL PG+ I G+ Q+YN Sbjct: 9 LFSTNHKDIGTPYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYN 59 >UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2; n=21; Neocoleoidea|Rep: NADH-ubiquinone oxidoreductase chain 2 - Sepia officinalis (Common cuttlefish) Length = 375 Score = 35.1 bits (77), Expect = 1.5 Identities = 16/33 (48%), Positives = 21/33 (63%) Frame = +3 Query: 9 MNLFYKS*RYWNIIFYFWYLIRNNWNIFKTFNS 107 M + KS YWNI+F+FWYLI ++ K NS Sbjct: 339 MIILNKSQSYWNIMFHFWYLISFISHLAKINNS 371 >UniRef50_P03877 Cluster: Intron-encoded DNA endonuclease aI3 precursor (DNA endonuclease I- SceIII) [Contains: Truncated non-functional cytochrome oxidase 1; DNA endonuclease aI3 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceIII)]; n=5; Saccharomycetales|Rep: Intron-encoded DNA endonuclease aI3 precursor (DNA endonuclease I- SceIII) [Contains: Truncated non-functional cytochrome oxidase 1; DNA endonuclease aI3 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceIII)] - Saccharomyces cerevisiae (Baker's yeast) Length = 403 Score = 34.3 bits (75), Expect = 2.6 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 2/54 (3%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIV 168 +YSTN KDI LY EL PGS L G+ Q++N +V Sbjct: 6 LYSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLV 59 >UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus flagellatus KT|Rep: Cytochrome-c oxidase - Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) Length = 631 Score = 33.9 bits (74), Expect = 3.4 Identities = 33/174 (18%), Positives = 57/174 (32%) Frame = +1 Query: 112 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINN 291 +L P + D + YN + + H ++PL+L D+ FPR+N Sbjct: 64 QLAVPENDFMDPETYNQVFSMHGITMMFLFAIPVMEGFAVY-IIPLMLGTRDMTFPRLNA 122 Query: 292 IRFXXXXXXXXXXXXRXIVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXX 471 + ++ G YPPL+ G + + IS+ Sbjct: 123 FGYYIYLIAGVMMYAALLLRIAPDAGWFSYPPLAGASFSPGLGLDFYTTVVTFMEISALV 182 Query: 472 XXXXXXXXXXXXXXXXXSFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDR 633 S +++P+FV AV + +F A +L DR Sbjct: 183 AAIELIATIFKCKVPGMSLNRMPIFVWAVLVMSFMIVFALPPLVIASLMLALDR 236 >UniRef50_Q6PW10 Cluster: Cytochrome oxidase subunit I; n=1; Bohadschia argus|Rep: Cytochrome oxidase subunit I - Bohadschia argus Length = 247 Score = 33.5 bits (73), Expect = 4.5 Identities = 21/74 (28%), Positives = 30/74 (40%) Frame = +3 Query: 225 IWKLIXXXXXXXXXXXIPTNK*YKILTPTPLPYIINFKXNCXKWCRNRMNSLPPTFI*YR 404 +W L IP N+ ++L L + + K CRNRMN+LP Sbjct: 28 LWNLTYTFNDSSPWYGIPPNEQNELLVSPSLFHSTPSISSSGKSCRNRMNNLPTLIQNNS 87 Query: 405 T*RKIRXSCYFFTT 446 R + YFF+T Sbjct: 88 PRRSVSSPRYFFST 101 >UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; Proteobacteria|Rep: Cytochrome c oxidase, subunit I - Mesorhizobium sp. (strain BNC1) Length = 845 Score = 33.1 bits (72), Expect = 5.9 Identities = 38/187 (20%), Positives = 58/187 (31%), Gaps = 1/187 (0%) Frame = +1 Query: 13 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNP-GSLIGDDQIYNTIVTAHAXXX 189 I + N++ IG LY +L P L+G D YN I T H Sbjct: 34 ISAVNNQVIGILYVGAAFLFFILAGILGLIMRTQLAVPENDLVGQD-FYNQIFTVHGTTM 92 Query: 190 XXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG 369 L+P +L A D+ FPR++ G Sbjct: 93 MFLFAVPVVEALGVM-LLPQMLAARDLPFPRLSAFAIWAYIVGGLVFFSTVFYDLAPKGG 151 Query: 370 *TVYPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 549 +YPPL+ G + + + IS+ S ++P+F Sbjct: 152 WFMYPPLTLKEYSPGDNADFWLLGIGFIEISAIAGAIEIIVGTLRTRPPGMSLTRMPIFA 211 Query: 550 *AVGITA 570 A+ I A Sbjct: 212 WAMLIFA 218 >UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter shibae DFL 12|Rep: Cytochrome-c oxidase - Dinoroseobacter shibae DFL 12 Length = 853 Score = 33.1 bits (72), Expect = 5.9 Identities = 31/185 (16%), Positives = 58/185 (31%) Frame = +1 Query: 19 STNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXX 198 + +H+ +G + +L P + + YN + T H Sbjct: 52 AVSHRAVGKRFLITGFIFFLIAGVFALLVRLQLMVPENTFLSSETYNQLFTMHGTIMMFL 111 Query: 199 XXXXXXXXXXXN*LVPLILXAPDIAFPRINNIRFXXXXXXXXXXXXRXIVXNGAGTG*TV 378 L+PL++ A D+ FPR+ + + G + Sbjct: 112 FAIPMLEGFAVY-LIPLMIGARDLVFPRLGAFGYYCYLFGGIIVLSSFLFDAAPDGGWFM 170 Query: 379 YPPLSSNIAHRGRSVXLAIFSLHLXGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 558 Y PLS++ G S + + L I+S S ++P+ + + Sbjct: 171 YVPLSTSAYTEGLSADFWLIGITLAEIASVTAAVEIIAAILCSRAPGMSLTKMPILMWYL 230 Query: 559 GITAF 573 TAF Sbjct: 231 LATAF 235 >UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria bacterium (strain Ellin345) Length = 595 Score = 32.7 bits (71), Expect = 7.8 Identities = 22/94 (23%), Positives = 37/94 (39%), Gaps = 1/94 (1%) Frame = +1 Query: 118 GNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILXAPDIAFPRINNIR 297 G PG ++ + Y +++T H N +P+ + A D+AFPR N + Sbjct: 75 GAPGDVM-TPEYYLSLLTMHGTLMVFFVLTNAPFAAFGNYFLPIQIGAEDMAFPRFNMMS 133 Query: 298 FXXXXXXXXXXXXRXIVXNGAG-TG*TVYPPLSS 396 F + +G +G T Y LS+ Sbjct: 134 FWTTFAAFCVLIAAFFIPDGPPISGWTAYATLSA 167 >UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2; Plasmodium|Rep: Putative uncharacterized protein - Plasmodium falciparum (isolate 3D7) Length = 1420 Score = 32.7 bits (71), Expect = 7.8 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = -1 Query: 632 RSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDILFN 510 +++NN +I S NNN N++ T TN + +N+I +N Sbjct: 1038 KTINNNIINDTSQSSYNNNMNSIQNTNRTNSSSSNNNISYN 1078 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 428,272,025 Number of Sequences: 1657284 Number of extensions: 6284604 Number of successful extensions: 14799 Number of sequences better than 10.0: 100 Number of HSP's better than 10.0 without gapping: 13525 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 14607 length of database: 575,637,011 effective HSP length: 98 effective length of database: 413,223,179 effective search space used: 48760335122 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -