BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_C11 (655 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC839.17c |fkh1||FKBP-type peptidyl-prolyl cis-trans isomerase... 152 5e-38 SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 93 4e-20 SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase |S... 79 6e-16 SPAC1486.02c |ucp14||UBA domain protein Ucp14|Schizosaccharomyce... 27 2.4 SPAC16C9.02c |||S-methyl-5-thioadenosine phosphorylase|Schizosac... 26 4.1 SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 26 5.5 SPAC56E4.03 |||aromatic aminotransferase |Schizosaccharomyces po... 25 9.5 >SPBC839.17c |fkh1||FKBP-type peptidyl-prolyl cis-trans isomerase Fkh1|Schizosaccharomyces pombe|chr 2|||Manual Length = 112 Score = 152 bits (368), Expect = 5e-38 Identities = 68/107 (63%), Positives = 82/107 (76%) Frame = +3 Query: 72 MGVTVETISPGDESTYPKSGQTVXVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGW 251 MGV + IS G+ +PK G + +HYTGTLTNGKKFDSS DRG PF IG ++IRGW Sbjct: 1 MGVEKQVISSGNGQDFPKPGDRITMHYTGTLTNGKKFDSSVDRGSPFVCTIGVGQLIRGW 60 Query: 252 DEGVAKMSVXERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRL 392 DEGV KMS+ E+AKLT +PDY YG +G PG+IPPNSTL+FDVELL + Sbjct: 61 DEGVPKMSLGEKAKLTITPDYGYGPRGFPGLIPPNSTLLFDVELLAI 107 >SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomerase|Schizosaccharomyces pombe|chr 2|||Manual Length = 361 Score = 92.7 bits (220), Expect = 4e-20 Identities = 49/106 (46%), Positives = 65/106 (61%) Frame = +3 Query: 75 GVTVETISPGDESTYPKSGQTVXVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWD 254 GV V + G ++ +G+ V + Y G L NGK FD + +GKPF F +G+ EVIRGWD Sbjct: 258 GVVVTDVKTGSGAS-ATNGKKVEMRYIGKLENGKVFDKNT-KGKPFAFILGRGEVIRGWD 315 Query: 255 EGVAKMSVXERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRL 392 GVA M K+T AYG Q PG IP NSTL+F+V+L+R+ Sbjct: 316 VGVAGMQEGGERKITIPAPMAYGNQSIPG-IPKNSTLVFEVKLVRV 360 >SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase |Schizosaccharomyces pombe|chr 1|||Manual Length = 362 Score = 79.0 bits (186), Expect = 6e-16 Identities = 46/103 (44%), Positives = 57/103 (55%) Frame = +3 Query: 78 VTVETISPGDESTYPKSGQTVXVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDE 257 VTV+ GD K + V + Y G LTNGK FD + GKPF F +G EVI+GWD Sbjct: 260 VTVQDKVKGDGPA-AKRKKRVSMRYIGRLTNGKVFDKNIT-GKPFTFNLGLEEVIKGWDV 317 Query: 258 GVAKMSVXERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELL 386 G+ M V + AYG + PG IP NS L+FDV+LL Sbjct: 318 GIVGMQVGGERTIHIPAAMAYGSKRLPG-IPANSDLVFDVKLL 359 >SPAC1486.02c |ucp14||UBA domain protein Ucp14|Schizosaccharomyces pombe|chr 1|||Manual Length = 372 Score = 27.1 bits (57), Expect = 2.4 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 6/49 (12%) Frame = +2 Query: 485 FYHI---LSLXSLYQHYVYL*WKYIY---TYAIRXNFILYVNXFMVRLI 613 F+HI L L S YQ++ L W++IY T + FI+Y + RL+ Sbjct: 36 FFHINFGLHLLSHYQYWRILLWQFIYWNSTEVFQALFIIYQARDVERLL 84 >SPAC16C9.02c |||S-methyl-5-thioadenosine phosphorylase|Schizosaccharomyces pombe|chr 1|||Manual Length = 307 Score = 26.2 bits (55), Expect = 4.1 Identities = 14/40 (35%), Positives = 18/40 (45%) Frame = +3 Query: 201 GKPFKFRIGKSEVIRGWDEGVAKMSVXERAKLTCSPDYAY 320 G F R +S + R W + MSV AKL + AY Sbjct: 176 GPAFSTR-AESNLYRSWGASIINMSVIPEAKLAREAEIAY 214 >SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1|||Manual Length = 214 Score = 25.8 bits (54), Expect = 5.5 Identities = 12/37 (32%), Positives = 20/37 (54%) Frame = +3 Query: 78 VTVETISPGDESTYPKSGQTVXVHYTGTLTNGKKFDS 188 V+ ++ GD+ +P +GQT+ + T N KK S Sbjct: 175 VSNRSLEAGDDGVHPTAGQTLNIAPTMNDLNKKKSSS 211 >SPAC56E4.03 |||aromatic aminotransferase |Schizosaccharomyces pombe|chr 1|||Manual Length = 474 Score = 25.0 bits (52), Expect = 9.5 Identities = 13/33 (39%), Positives = 23/33 (69%), Gaps = 5/33 (15%) Frame = +2 Query: 503 LXSLYQHYV---YL*W-KYI-YTYAIRXNFILY 586 L ++++H+ YL W K+I Y+Y +R N++LY Sbjct: 337 LYAMFKHWGQDGYLEWLKHIRYSYTLRRNYLLY 369 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,600,918 Number of Sequences: 5004 Number of extensions: 52285 Number of successful extensions: 132 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 120 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 128 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 295793106 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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