Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_C11
(655 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8342| Best HMM Match : FKBP_C (HMM E-Value=0) 108 3e-24
SB_19729| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_53649| Best HMM Match : FKBP_C (HMM E-Value=4.1e-05) 40 0.002
SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_21064| Best HMM Match : TPR_2 (HMM E-Value=3.5e-09) 37 0.012
SB_6446| Best HMM Match : DENN (HMM E-Value=2.2) 34 0.12
SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_57839| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_31904| Best HMM Match : Extensin_2 (HMM E-Value=0.5) 28 7.6
SB_10820| Best HMM Match : Sulfotransfer_1 (HMM E-Value=0) 28 7.6
>SB_8342| Best HMM Match : FKBP_C (HMM E-Value=0)
Length = 266
Score = 108 bits (260), Expect = 3e-24
Identities = 51/118 (43%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Frame = +3
Query: 84 VETISPGDESTYPKS-GQTVXVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEG 260
+E +S ++ T G T+ +HYTG L NG KFDSS DRGK F F +GK VI+GW++G
Sbjct: 29 IEVVSKPEKCTRKTHVGDTLSMHYTGRLANGNKFDSSLDRGKTFDFTLGKGMVIQGWEQG 88
Query: 261 VAKMSVXERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRLE*IQFVTKNYYNII 434
+ M + E+ KLT P AYG+ G IPP++TL DVEL+ ++ + N + +I
Sbjct: 89 LLDMCIGEKRKLTIPPHLAYGENGAGAAIPPHATLYMDVELVEIQGSKESDPNVFGMI 146
>SB_19729| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 77.4 bits (182), Expect = 1e-14
Identities = 43/106 (40%), Positives = 62/106 (58%), Gaps = 7/106 (6%)
Frame = +3
Query: 87 ETISPGDESTYPKSGQTVXVHYTGTLTNGKKFDSSRDRGK---PFKFRIGKSEVIRGWDE 257
ET P D K G V VHYTG + +G FD++RD K PF+F IG VI+G+++
Sbjct: 104 ETFVPSDCENKTKVGDHVVVHYTGWMQDGSLFDTTRDHRKGYQPFEFTIGGGTVIKGFEQ 163
Query: 258 GVAKMSVXERAKLTCSPDYAYGQQGH---PGVIP-PNSTLIFDVEL 383
GV M V ++ K+ P AYG++G PG + N+TL +++EL
Sbjct: 164 GVTGMCVGQKRKIVIPPALAYGKKGSGDVPGNLDLTNTTLTYNLEL 209
>SB_53649| Best HMM Match : FKBP_C (HMM E-Value=4.1e-05)
Length = 639
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 4/46 (8%)
Frame = +3
Query: 123 KSGQTVXVHYTGTLTN----GKKFDSSRDRGKPFKFRIGKSEVIRG 248
++G V V YTG L GK FDS+ K FKF+ GK +VI+G
Sbjct: 120 ETGDAVEVKYTGWLLENGNFGKVFDSNAGTDKTFKFKTGKGKVIKG 165
>SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1190
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/52 (38%), Positives = 28/52 (53%)
Frame = +3
Query: 75 GVTVETISPGDESTYPKSGQTVXVHYTGTLTNGKKFDSSRDRGKPFKFRIGK 230
GV +S G + G TV V Y G NG++FDS+ G PF+F +G+
Sbjct: 873 GVRKRILSEGHGAEMANVGCTVVVRYVGKFLNGEEFDSNTG-GVPFEFVLGE 923
>SB_21064| Best HMM Match : TPR_2 (HMM E-Value=3.5e-09)
Length = 372
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 174 KKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVXERAKLTCSPDYAYG 323
++ D SR G+PF+ +GK + W+E + M V E A+ TC G
Sbjct: 110 QELDCSRKIGQPFELLMGKKFKLEIWEELIKTMRVKEVARFTCDKSVVAG 159
>SB_6446| Best HMM Match : DENN (HMM E-Value=2.2)
Length = 492
Score = 33.9 bits (74), Expect = 0.12
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Frame = +3
Query: 267 KMSVXERAKLTCSPDYA----YGQQGHPGVIPPNSTLIFDVELLRLE*IQFVTKNYYNII 434
++ R +CSP A + Q+G ++ PNST +F + L R + QF +I
Sbjct: 268 RLLAVNRRLFSCSPHVAAIFDFYQRGSLVILNPNSTAVFQIALYRKKIAQFAFAT-SKVI 326
Query: 435 VMSIAL*NSKSQLITLFFITYSH 503
S+ L + L+ + TY+H
Sbjct: 327 ETSLHLRTHPTTLMLAPYYTYAH 349
>SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4865
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/65 (21%), Positives = 33/65 (50%)
Frame = +2
Query: 365 YFRCRTSTSRINTICNQKLLQHHCYVNCPLKL*VTAYHIIFYHILSLXSLYQHYVYL*WK 544
Y+R + + ++++ + ++H Y+ PL++ V+ YH L + S Y Y+ + +
Sbjct: 3573 YYRASLACNPVSSVYYRASSEYHRYIIVPLRI-VSEYHRYIIVPLRIVSEYHRYIIVPLR 3631
Query: 545 YIYTY 559
+ Y
Sbjct: 3632 IVSEY 3636
>SB_57839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 28.3 bits (60), Expect = 5.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 321 RKHSQESRLIWHAHXQTSLPHPH 253
RK+SQ + +IW+ H Q H H
Sbjct: 109 RKNSQRNNIIWYNHFQQEHKHQH 131
>SB_31904| Best HMM Match : Extensin_2 (HMM E-Value=0.5)
Length = 398
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = -1
Query: 274 DIFATPSSQPRITSDFPILNLKGLPRSRDESNFLP 170
D+ +T SQP+I S + G+PR R SN P
Sbjct: 214 DVSSTKRSQPKIGSSALLPKSFGVPRDRSPSNEKP 248
>SB_10820| Best HMM Match : Sulfotransfer_1 (HMM E-Value=0)
Length = 922
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 111 STYPKSGQTVXVHYTGTLTNGKKFD 185
+ YPKSGQT + + NG +FD
Sbjct: 36 TAYPKSGQTWTIEIVKQVLNGGEFD 60
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,949,357
Number of Sequences: 59808
Number of extensions: 379481
Number of successful extensions: 841
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 839
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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