BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_C10 (654 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 05_03_0118 - 8586731-8587220,8587331-8587846,8588842-8588906,858... 30 1.9 09_06_0320 - 22297579-22297760,22298433-22299358,22299422-222997... 28 5.6 06_03_0938 - 26126669-26127115,26127197-26127619,26127727-26128047 28 5.6 >05_03_0118 - 8586731-8587220,8587331-8587846,8588842-8588906, 8589483-8589989 Length = 525 Score = 29.9 bits (64), Expect = 1.9 Identities = 15/33 (45%), Positives = 17/33 (51%) Frame = -2 Query: 347 YYLLIQCNNPYKIHH*ATSLIAHTLVNNSQSFI 249 Y LI CN KIH SL H N S++FI Sbjct: 74 YLGLITCNRARKIHQEVNSLFTHLNPNFSENFI 106 >09_06_0320 - 22297579-22297760,22298433-22299358,22299422-22299747, 22300591-22300660,22301632-22301726,22301917-22302048, 22302154-22302222,22302953-22303051,22303169-22303253, 22303353-22303453,22303660-22303728,22303861-22303901, 22304085-22304303,22304444-22304470,22304562-22304660, 22304898-22305106,22305382-22305485,22305753-22305894, 22305991-22306289,22306508-22306903 Length = 1229 Score = 28.3 bits (60), Expect = 5.6 Identities = 13/35 (37%), Positives = 18/35 (51%) Frame = +3 Query: 30 GRTLSRRPQTPASRAPLSRPNAGSIGGSWCKNWTK 134 G +LS P + P AG+ GGS CK+W + Sbjct: 39 GSSLSASSDFPFHLPSAAAPAAGAPGGSPCKSWAQ 73 >06_03_0938 - 26126669-26127115,26127197-26127619,26127727-26128047 Length = 396 Score = 28.3 bits (60), Expect = 5.6 Identities = 13/43 (30%), Positives = 21/43 (48%) Frame = +1 Query: 40 YQGGHKHQRPGRH*AGRMQAALEEAGAKTGPRWSRPSAMRKRQ 168 Y+G H H +P H AG AA + P + + +R++Q Sbjct: 302 YEGEHNHAQPPHHDAGSKTAAAAKHSQHQPPPSAAAAVVRQQQ 344 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,118,836 Number of Sequences: 37544 Number of extensions: 301813 Number of successful extensions: 754 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 740 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 754 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1632177336 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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