Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_C08
(443 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V668 Cluster: Protein transport protein SEC61 gamma-1... 81 1e-14
UniRef50_P60059 Cluster: Protein transport protein SEC61 subunit... 79 3e-14
UniRef50_Q19967 Cluster: Protein transport protein SEC61 subunit... 72 6e-12
UniRef50_Q6TXH8 Cluster: LRRGT00021; n=1; Rattus norvegicus|Rep:... 70 3e-11
UniRef50_Q7TQ10 Cluster: Aa1027; n=1; Rattus norvegicus|Rep: Aa1... 63 2e-09
UniRef50_Q8BZY7 Cluster: 15 days embryo male testis cDNA, RIKEN ... 52 7e-06
UniRef50_Q4QPX3 Cluster: IP05558p; n=2; Drosophila melanogaster|... 50 2e-05
UniRef50_Q9C2D4 Cluster: Probable protein transport protein SEC6... 48 9e-05
UniRef50_A3FPQ8 Cluster: Sec61-gamma subunit of protein transloc... 47 2e-04
UniRef50_A2XI76 Cluster: Putative uncharacterized protein; n=2; ... 44 0.001
UniRef50_Q00VG1 Cluster: Chromosome 15 contig 1, DNA sequence; n... 42 0.006
UniRef50_P35179 Cluster: Protein transport protein SSS1; n=6; Sa... 40 0.024
UniRef50_Q09827 Cluster: Probable protein transport protein SEC6... 40 0.024
UniRef50_A0C442 Cluster: Chromosome undetermined scaffold_148, w... 38 0.074
UniRef50_UPI0000499206 Cluster: protein translocase SEC61 comple... 38 0.097
UniRef50_Q4WWS5 Cluster: Protein translocation complex subunit S... 38 0.097
UniRef50_Q465F8 Cluster: Putative uncharacterized protein; n=1; ... 34 1.6
UniRef50_Q8I895 Cluster: Protein phosphatase 2C; n=2; Plasmodium... 33 2.8
>UniRef50_Q9V668 Cluster: Protein transport protein SEC61 gamma-1
subunit; n=9; Eukaryota|Rep: Protein transport protein
SEC61 gamma-1 subunit - Drosophila melanogaster (Fruit
fly)
Length = 68
Score = 81.0 bits (191), Expect = 1e-14
Identities = 38/58 (65%), Positives = 42/58 (72%)
Frame = +2
Query: 92 MDQIAKFVEPGKQFAKDSIRLXRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLIH 265
MD++ KF EPG+ FAKDSIRL +RCTKPDRKEFQKIAIATA VKLIH
Sbjct: 1 MDKVVKFAEPGRAFAKDSIRLVKRCTKPDRKEFQKIAIATAVGFAIMGFIGFFVKLIH 58
>UniRef50_P60059 Cluster: Protein transport protein SEC61 subunit
gamma; n=16; Chordata|Rep: Protein transport protein
SEC61 subunit gamma - Homo sapiens (Human)
Length = 68
Score = 79.4 bits (187), Expect = 3e-14
Identities = 37/58 (63%), Positives = 42/58 (72%)
Frame = +2
Query: 92 MDQIAKFVEPGKQFAKDSIRLXRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLIH 265
MDQ+ +FVEP +QF KDSIRL +RCTKPDRKEFQKIA+ATA VKLIH
Sbjct: 1 MDQVMQFVEPSRQFVKDSIRLVKRCTKPDRKEFQKIAMATAIGFAIMGFIGFFVKLIH 58
>UniRef50_Q19967 Cluster: Protein transport protein SEC61 subunit
gamma; n=30; Eukaryota|Rep: Protein transport protein
SEC61 subunit gamma - Caenorhabditis elegans
Length = 68
Score = 71.7 bits (168), Expect = 6e-12
Identities = 33/58 (56%), Positives = 39/58 (67%)
Frame = +2
Query: 92 MDQIAKFVEPGKQFAKDSIRLXRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLIH 265
MDQ +EP +QF+KDS RL +RCTKPDRKE+QKIA+ATA VKLIH
Sbjct: 1 MDQFQALIEPARQFSKDSYRLVKRCTKPDRKEYQKIAMATAIGFAIMGFIGFFVKLIH 58
>UniRef50_Q6TXH8 Cluster: LRRGT00021; n=1; Rattus norvegicus|Rep:
LRRGT00021 - Rattus norvegicus (Rat)
Length = 233
Score = 69.7 bits (163), Expect = 3e-11
Identities = 35/57 (61%), Positives = 39/57 (68%)
Frame = +2
Query: 92 MDQIAKFVEPGKQFAKDSIRLXRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLI 262
MDQ+ +FVEP +QF KDSIRL +R TKPDRKEFQKIA ATA VKLI
Sbjct: 173 MDQVMQFVEPSRQFVKDSIRLVKRRTKPDRKEFQKIARATAIGFAIMGFIGFFVKLI 229
>UniRef50_Q7TQ10 Cluster: Aa1027; n=1; Rattus norvegicus|Rep: Aa1027
- Rattus norvegicus (Rat)
Length = 135
Score = 63.3 bits (147), Expect = 2e-09
Identities = 30/53 (56%), Positives = 36/53 (67%)
Frame = +2
Query: 107 KFVEPGKQFAKDSIRLXRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLIH 265
+ VEP +QF KDSI+L +RCT+P RKEFQKIA+ATA VKLIH
Sbjct: 2 QLVEPSRQFVKDSIQLVKRCTEPARKEFQKIAMATAIGFAIMGFIGFFVKLIH 54
>UniRef50_Q8BZY7 Cluster: 15 days embryo male testis cDNA, RIKEN
full-length enriched library, clone:8030453L09
product:PROTEIN TRANSPORT PROTEIN SEC61 GAMMA SUBUNIT
homolog; n=1; Mus musculus|Rep: 15 days embryo male
testis cDNA, RIKEN full-length enriched library,
clone:8030453L09 product:PROTEIN TRANSPORT PROTEIN SEC61
GAMMA SUBUNIT homolog - Mus musculus (Mouse)
Length = 60
Score = 51.6 bits (118), Expect = 7e-06
Identities = 20/31 (64%), Positives = 27/31 (87%)
Frame = +2
Query: 92 MDQIAKFVEPGKQFAKDSIRLXRRCTKPDRK 184
MDQ+ +F+EPG QF KDSI+L +RCTKPD++
Sbjct: 1 MDQVMQFLEPGWQFVKDSIQLVKRCTKPDKR 31
Score = 43.2 bits (97), Expect = 0.003
Identities = 19/51 (37%), Positives = 33/51 (64%)
Frame = +1
Query: 121 WQAIR*GLHQIXEKMHKT**ERIPKDCHCNSHRILHHGLHWILCKADSYPH 273
WQ ++ + Q+ ++ K +RIP+ CH S+RI +H +HW+L + D YP+
Sbjct: 12 WQFVKDSI-QLVKRCTKPD-KRIPEACHGYSYRICYHEIHWLLRETDPYPY 60
>UniRef50_Q4QPX3 Cluster: IP05558p; n=2; Drosophila
melanogaster|Rep: IP05558p - Drosophila melanogaster
(Fruit fly)
Length = 124
Score = 50.0 bits (114), Expect = 2e-05
Identities = 22/49 (44%), Positives = 29/49 (59%)
Frame = +2
Query: 119 PGKQFAKDSIRLXRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLIH 265
P K F K+S+R +RCTKPDR+EFQ+I+I VKL+H
Sbjct: 67 PSKDFYKNSLRFYKRCTKPDRREFQRISIGIGVGFLIMGLIGFVVKLMH 115
>UniRef50_Q9C2D4 Cluster: Probable protein transport protein SEC61
subunit gamma; n=11; Dikarya|Rep: Probable protein
transport protein SEC61 subunit gamma - Neurospora
crassa
Length = 70
Score = 48.0 bits (109), Expect = 9e-05
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = +2
Query: 95 DQIAKFVEPGKQFAKDSIRLXRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLIH 265
DQI + ++ ++F KD I+ ++C KPDR+EF KI+ A VKLIH
Sbjct: 3 DQIQEILDVPREFLKDGIQFIKKCQKPDRREFIKISQAVGTGFLIMGAVGYLVKLIH 59
>UniRef50_A3FPQ8 Cluster: Sec61-gamma subunit of protein
translocation complex, putative; n=10; Apicomplexa|Rep:
Sec61-gamma subunit of protein translocation complex,
putative - Cryptosporidium parvum Iowa II
Length = 87
Score = 46.8 bits (106), Expect = 2e-04
Identities = 22/49 (44%), Positives = 28/49 (57%)
Frame = +2
Query: 116 EPGKQFAKDSIRLXRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLI 262
+ ++FA DSIRL RRCTKPD KEF+ +A A VKL+
Sbjct: 25 QSAQEFALDSIRLVRRCTKPDAKEFRNVAYACTVGFFLMGFIGYSVKLV 73
>UniRef50_A2XI76 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 118
Score = 44.0 bits (99), Expect = 0.001
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +2
Query: 92 MDQIAKFVEPGKQFAKDSIRLXRRCTKPDRKEFQKI 199
MD + V+ ++FAKDSI L + C KPDRKEF K+
Sbjct: 72 MDAVDSVVDSLREFAKDSICLVKHCHKPDRKEFTKV 107
>UniRef50_Q00VG1 Cluster: Chromosome 15 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 15 contig 1, DNA
sequence - Ostreococcus tauri
Length = 381
Score = 41.9 bits (94), Expect = 0.006
Identities = 26/60 (43%), Positives = 32/60 (53%)
Frame = -3
Query: 297 YEPTIMLLMGI*ISFTXXXXXXXXXXXMAVAMAIFWNSFLSGFVHLLXNLMESLANCLPG 118
YE +MLL+G+ +SFT +AV AI NS SG VH +L SLAN L G
Sbjct: 49 YELKMMLLIGMKMSFTKKPTNPMITNPVAVRRAIIQNSRASGLVHRFTSLALSLANSLTG 108
>UniRef50_P35179 Cluster: Protein transport protein SSS1; n=6;
Saccharomycetaceae|Rep: Protein transport protein SSS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 80
Score = 39.9 bits (89), Expect = 0.024
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +2
Query: 95 DQIAKFVEPGKQFAKDSIRLXRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLIH 265
+Q+ K VE +F ++ + +C KPD KE+ KI A +KLIH
Sbjct: 16 NQVEKLVEAPVEFVREGTQFLAKCKKPDLKEYTKIVKAVGIGFIAVGIIGYAIKLIH 72
>UniRef50_Q09827 Cluster: Probable protein transport protein SEC61
subunit gamma; n=9; Dikarya|Rep: Probable protein
transport protein SEC61 subunit gamma -
Schizosaccharomyces pombe (Fission yeast)
Length = 70
Score = 39.9 bits (89), Expect = 0.024
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = +2
Query: 125 KQFAKDSIRLXRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLIH 265
K F K+ +RC KPDRKEF I+ A A +KLIH
Sbjct: 13 KNFYKEGSHFIKRCVKPDRKEFLSISKAVATGFVLMGLIGYIIKLIH 59
>UniRef50_A0C442 Cluster: Chromosome undetermined scaffold_148,
whole genome shotgun sequence; n=6;
Oligohymenophorea|Rep: Chromosome undetermined
scaffold_148, whole genome shotgun sequence - Paramecium
tetraurelia
Length = 74
Score = 38.3 bits (85), Expect = 0.074
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 131 FAKDSIRLXRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLI 262
F ++S R R+CTKPD++E+ KIA + A +KL+
Sbjct: 19 FGQESYRFIRKCTKPDKREYIKIATSCAIGFAVMGAVGYFIKLV 62
>UniRef50_UPI0000499206 Cluster: protein translocase SEC61 complex
gamma subunit; n=2; Entamoeba histolytica HM-1:IMSS|Rep:
protein translocase SEC61 complex gamma subunit -
Entamoeba histolytica HM-1:IMSS
Length = 70
Score = 37.9 bits (84), Expect = 0.097
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 92 MDQIAKFV-EPGKQFAKDSIRLXRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLIH 265
MD + ++V EP ++F DS R +C KP++KE+ K +KL+H
Sbjct: 1 MDTLEQYVLEPTEEFILDSKRFITKCNKPNQKEYNKTIYVVLIGFAILGFCGYFIKLVH 59
>UniRef50_Q4WWS5 Cluster: Protein translocation complex subunit
Sss1, putative; n=3; Trichocomaceae|Rep: Protein
translocation complex subunit Sss1, putative -
Aspergillus fumigatus (Sartorya fumigata)
Length = 88
Score = 37.9 bits (84), Expect = 0.097
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +2
Query: 95 DQIAKFVEPGKQFAKDSIRLXRRCTKPDRKEFQKIAIA 208
D I + + + F +D + RRCTKPD++EF KI+ A
Sbjct: 3 DTIQELADIPRDFLRDGMLFVRRCTKPDKREFIKISQA 40
>UniRef50_Q465F8 Cluster: Putative uncharacterized protein; n=1;
Methanosarcina barkeri str. Fusaro|Rep: Putative
uncharacterized protein - Methanosarcina barkeri (strain
Fusaro / DSM 804)
Length = 211
Score = 33.9 bits (74), Expect = 1.6
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = -2
Query: 142 VLSELLARLDEFCDLIHY*INNSTIVLVVNSRRQLFKLLSSPTSKNV 2
++ +LLAR D+ C LIH N + V+N R++ F LS T++NV
Sbjct: 34 IIRKLLARYDDTCQLIH---ENGSYWFVINGRKRSFPELSH-TTENV 76
>UniRef50_Q8I895 Cluster: Protein phosphatase 2C; n=2; Plasmodium
falciparum 3D7|Rep: Protein phosphatase 2C - Plasmodium
falciparum (isolate 3D7)
Length = 906
Score = 33.1 bits (72), Expect = 2.8
Identities = 13/35 (37%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = -2
Query: 286 NYVINGDMNQLYKE-SNEAHDAKSDGCCNGNLLEF 185
+Y+ N ++N++YK N+ +D K DGCC +L+++
Sbjct: 375 SYITN-EINRVYKNVDNKENDKKDDGCCGPSLVKY 408
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 362,154,181
Number of Sequences: 1657284
Number of extensions: 5694043
Number of successful extensions: 9022
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 8832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9019
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22761518346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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