Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_C08
         (443 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR456979-1|CAG33260.1|   68|Homo sapiens SEC61G protein.               79   5e-15
BC051840-1|AAH51840.1|   68|Homo sapiens Sec61 gamma subunit pro...    79   5e-15
BC009480-1|AAH09480.1|   68|Homo sapiens Sec61 gamma subunit pro...    79   5e-15

>CR456979-1|CAG33260.1|   68|Homo sapiens SEC61G protein.
          Length = 68

 Score = 79.4 bits (187), Expect = 5e-15
 Identities = 37/58 (63%), Positives = 42/58 (72%)
 Frame = +2

Query: 92  MDQIAKFVEPGKQFAKDSIRLXRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLIH 265
           MDQ+ +FVEP +QF KDSIRL +RCTKPDRKEFQKIA+ATA            VKLIH
Sbjct: 1   MDQVMQFVEPSRQFVKDSIRLVKRCTKPDRKEFQKIAMATAIGFAIMGFIGFFVKLIH 58


>BC051840-1|AAH51840.1|   68|Homo sapiens Sec61 gamma subunit
           protein.
          Length = 68

 Score = 79.4 bits (187), Expect = 5e-15
 Identities = 37/58 (63%), Positives = 42/58 (72%)
 Frame = +2

Query: 92  MDQIAKFVEPGKQFAKDSIRLXRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLIH 265
           MDQ+ +FVEP +QF KDSIRL +RCTKPDRKEFQKIA+ATA            VKLIH
Sbjct: 1   MDQVMQFVEPSRQFVKDSIRLVKRCTKPDRKEFQKIAMATAIGFAIMGFIGFFVKLIH 58


>BC009480-1|AAH09480.1|   68|Homo sapiens Sec61 gamma subunit
           protein.
          Length = 68

 Score = 79.4 bits (187), Expect = 5e-15
 Identities = 37/58 (63%), Positives = 42/58 (72%)
 Frame = +2

Query: 92  MDQIAKFVEPGKQFAKDSIRLXRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLIH 265
           MDQ+ +FVEP +QF KDSIRL +RCTKPDRKEFQKIA+ATA            VKLIH
Sbjct: 1   MDQVMQFVEPSRQFVKDSIRLVKRCTKPDRKEFQKIAMATAIGFAIMGFIGFFVKLIH 58


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,463,190
Number of Sequences: 237096
Number of extensions: 869934
Number of successful extensions: 1285
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1285
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3659526016
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)