BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_C08 (443 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g50460.1 68418.m06248 protein transport protein SEC61 gamma s... 60 7e-10 At4g24920.1 68417.m03568 protein transport protein SEC61 gamma s... 60 7e-10 At3g48570.1 68416.m05303 protein transport protein SEC61 gamma s... 54 4e-08 At4g29200.1 68417.m04177 hypothetical protein 27 7.5 At3g21160.1 68416.m02673 mannosyl-oligosaccharide 1,2-alpha-mann... 26 10.0 >At5g50460.1 68418.m06248 protein transport protein SEC61 gamma subunit, putative similar to Swiss-Prot:Q19967 protein transport protein SEC61 gamma subunit [Caenorhabditis elegans] Length = 69 Score = 60.1 bits (139), Expect = 7e-10 Identities = 30/57 (52%), Positives = 35/57 (61%) Frame = +2 Query: 92 MDQIAKFVEPGKQFAKDSIRLXRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLI 262 MD I V+P + FAKDSIRL +RC KPDRKEF K+A+ TA VKLI Sbjct: 1 MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLI 57 >At4g24920.1 68417.m03568 protein transport protein SEC61 gamma subunit, putative similar to Swiss-Prot:Q19967 protein transport protein SEC61 gamma subunit [Caenorhabditis elegans] Length = 69 Score = 60.1 bits (139), Expect = 7e-10 Identities = 30/57 (52%), Positives = 35/57 (61%) Frame = +2 Query: 92 MDQIAKFVEPGKQFAKDSIRLXRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLI 262 MD I V+P + FAKDSIRL +RC KPDRKEF K+A+ TA VKLI Sbjct: 1 MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLI 57 >At3g48570.1 68416.m05303 protein transport protein SEC61 gamma subunit, putative similar to Swiss-Prot:Q19967 protein transport protein SEC61 gamma subunit [Caenorhabditis elegans] Length = 69 Score = 54.0 bits (124), Expect = 4e-08 Identities = 25/57 (43%), Positives = 34/57 (59%) Frame = +2 Query: 92 MDQIAKFVEPGKQFAKDSIRLXRRCTKPDRKEFQKIAIATAXXXXXXXXXXXXVKLI 262 M+ I ++P + FAK S+RL +RC KPDRKEF K+A+ TA VKL+ Sbjct: 1 MEAIDSAIDPLRDFAKSSVRLVQRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLV 57 >At4g29200.1 68417.m04177 hypothetical protein Length = 457 Score = 26.6 bits (56), Expect = 7.5 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = -3 Query: 441 FYKNQIIYLFMKLYNTVCC 385 F I+LFM L NTVCC Sbjct: 420 FKSMHFIFLFMVLGNTVCC 438 >At3g21160.1 68416.m02673 mannosyl-oligosaccharide 1,2-alpha-mannosidase, putative similar to mannosyl-oligosaccharide 1,2-alpha-mannosidase [Glycine max][GI:6552504] Length = 572 Score = 26.2 bits (55), Expect = 10.0 Identities = 9/20 (45%), Positives = 13/20 (65%) Frame = +1 Query: 76 NY*FNNGSDRKIRRAWQAIR 135 NY FN+GSD + +W +R Sbjct: 425 NYFFNSGSDMSVGTSWNILR 444 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 7,809,215 Number of Sequences: 28952 Number of extensions: 127035 Number of successful extensions: 254 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 252 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 254 length of database: 12,070,560 effective HSP length: 75 effective length of database: 9,899,160 effective search space used: 712739520 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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