BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_C07 (655 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC646.10c |||U3 snoRNP protein Nop56 |Schizosaccharomyces pomb... 152 5e-38 SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces pomb... 95 1e-20 SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde reduc... 27 1.8 SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase |Schizosa... 26 4.1 SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 5.5 SPAC1A6.10 ||SPAC30D11.15c|Moeb/ThiF domain|Schizosaccharomyces ... 25 7.2 SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 9.5 >SPBC646.10c |||U3 snoRNP protein Nop56 |Schizosaccharomyces pombe|chr 2|||Manual Length = 497 Score = 152 bits (368), Expect = 5e-38 Identities = 82/173 (47%), Positives = 114/173 (65%), Gaps = 1/173 (0%) Frame = +3 Query: 138 YVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVALENI 317 Y+L+E + G++LF V +++AA +V+ S+ D+ +F VV L +F P K+A ALEN Sbjct: 4 YLLYESATGYSLFDVVGADQIAAKTKEVQLSLQDISKFGKVVQLRSFIPFKNAAHALENA 63 Query: 318 NAVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAI-SEALEIQCTHTGAVPEI 494 N +SEG+L + L FLE LPK K+ K +LGV D L +I SE I+C + ++ Sbjct: 64 NDISEGVLNDFLKNFLELNLPKASKKKKVSLGVQDKNLATSIKSEIDAIECDTSELTQDL 123 Query: 495 LXGIRYHFHSLIKGLTLKACSVAQLGLGHSYSRARVKFNVHRVDNMIIQSIAL 653 L GIR+H L+K L+ AQLGLGHSYSRA+VKFNV+R DNMIIQ+IA+ Sbjct: 124 LRGIRFHGDKLLKQLSPGDFERAQLGLGHSYSRAKVKFNVNRNDNMIIQAIAI 176 >SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces pombe|chr 1|||Manual Length = 508 Score = 94.7 bits (225), Expect = 1e-20 Identities = 62/174 (35%), Positives = 98/174 (56%), Gaps = 2/174 (1%) Frame = +3 Query: 138 YVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVALENI 317 ++L E +AG+A+F+ + +L + E + + + ++ L +F +S + AL+N+ Sbjct: 2 FILTETAAGYAIFKAKD--KLLKKRDALIEDLKSPEGASNLLKLQSFAKFESTVDALDNV 59 Query: 318 NAVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISE--ALEIQCTHTGAVPE 491 +A+ EG + L+ LEG L K TL V DPKLG AI++ LE + +V + Sbjct: 60 SALVEGKVSSKLSSLLEG-LSDSKSS---TLVVADPKLGNAINKLPGLEFEIISDSSVQD 115 Query: 492 ILXGIRYHFHSLIKGLTLKACSVAQLGLGHSYSRARVKFNVHRVDNMIIQSIAL 653 + GIR H SLI GL + LGL HS SR ++KF+ +VD MI+Q+IAL Sbjct: 116 LYRGIREHLSSLISGLAPSDLNAMSLGLSHSLSRHKLKFSPDKVDTMIVQAIAL 169 >SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde reductase AKR3C2|Schizosaccharomyces pombe|chr 1|||Manual Length = 284 Score = 27.5 bits (58), Expect = 1.8 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Frame = +3 Query: 153 HSAGFALFRVAEFEEL---AAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIV 302 HS G + FR+ + EEL + P+V + Q + A L+ F K IV Sbjct: 138 HSVGVSNFRIPDLEELLKTSTITPRVNQIEFHPQVYKAAKPLVEFCQSKGIIV 190 >SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase |Schizosaccharomyces pombe|chr 2|||Manual Length = 889 Score = 26.2 bits (55), Expect = 4.1 Identities = 9/35 (25%), Positives = 24/35 (68%) Frame = +3 Query: 237 DLQRFNAVVTLIAFQPHKSAIVALENINAVSEGIL 341 D++ NA++ L+ P++S ++ E++++ +G+L Sbjct: 521 DVESQNAILLLLGCFPNQSPVLISESVSSYIQGVL 555 >SPAC29B12.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||Manual Length = 682 Score = 25.8 bits (54), Expect = 5.5 Identities = 14/51 (27%), Positives = 22/51 (43%) Frame = +2 Query: 392 TIKMHTRCTGSQARSSHQRGPGNSVHAYRSSPGDFXRHTLSLPLAHQRPYP 544 T+ + + +QA H GP S H S+P + +LP + P P Sbjct: 533 TLPVLSAAAATQAAMPHTMGP--SAHDSASAPSPHMQSQQALPYQYYNPLP 581 >SPAC1A6.10 ||SPAC30D11.15c|Moeb/ThiF domain|Schizosaccharomyces pombe|chr 1|||Manual Length = 485 Score = 25.4 bits (53), Expect = 7.2 Identities = 11/32 (34%), Positives = 19/32 (59%) Frame = -2 Query: 288 CVVGKLLKSQQH*NVANLSRTLRPEAGKPLTL 193 CV+ L+ ++H ++ L + PEAGK + L Sbjct: 44 CVILGTLEFRKHRSIRRLQSMIVPEAGKSIQL 75 >SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual Length = 1236 Score = 25.0 bits (52), Expect = 9.5 Identities = 20/74 (27%), Positives = 29/74 (39%) Frame = -1 Query: 439 AAPSLGSSTPSVHFDRFFLFGRPPSRNRFKSSGRIPSDTALIFSKATIADLCGWKAIKVT 260 A PS SSTPS P + SS IP+ ++ FS + G + + Sbjct: 517 AIPSTSSSTPSSSIIS------SPMTSVLSSSSSIPTSSSSDFSSSITTISSGISSSSIP 570 Query: 259 TALKRCKSVTDSST 218 + S+ SST Sbjct: 571 STFSSVSSILSSST 584 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,652,082 Number of Sequences: 5004 Number of extensions: 53710 Number of successful extensions: 133 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 128 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 130 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 295793106 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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