Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_C07
(655 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_1010 - 13194002-13194339,13194421-13194573,13194661-131948... 165 4e-41
07_03_1578 + 27872636-27872840,27872928-27873175,27873215-278732... 116 2e-37
03_02_0999 - 13105030-13105434,13105716-13105850,13105933-131061... 93 2e-19
03_02_0998 - 13097675-13098079,13098307-13098441,13098522-130987... 93 2e-19
12_02_1165 + 26633371-26633679,26635183-26635276,26635732-266358... 35 0.049
09_02_0393 + 8510089-8510274,8510450-8510806,8510889-8511011,851... 32 0.46
04_01_0275 + 3648866-3649951 28 7.5
11_06_0190 - 21071831-21071947,21072164-21072259,21072883-210729... 27 9.9
06_01_1076 - 8778210-8778734 27 9.9
05_06_0075 - 25379820-25380776,25380851-25381179,25381255-25381453 27 9.9
04_03_0055 + 10299539-10299703,10300042-10300746,10301025-103011... 27 9.9
>03_02_1010 -
13194002-13194339,13194421-13194573,13194661-13194809,
13194932-13195184,13195282-13195469,13195684-13195841,
13196093-13196307,13196410-13196614
Length = 552
Score = 165 bits (400), Expect = 4e-41
Identities = 86/174 (49%), Positives = 111/174 (63%), Gaps = 2/174 (1%)
Frame = +3
Query: 138 YVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVALENI 317
Y+LFE ++G+ LF +E+ + V SV DL RF V L AF P SA+ AL
Sbjct: 4 YLLFESASGYGLFHAYGIDEIGQSVDAVRASVVDLDRFGKAVKLAAFTPFSSAVDALNQC 63
Query: 318 NAVSEGILPEDLNLFLEGGLPKRK--KRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPE 491
NA+SEGI+ ++L FLE LPK K K++K +LGV++PK+G+ ISE I C V E
Sbjct: 64 NAISEGIMTDELRSFLELNLPKPKEGKKAKYSLGVVEPKVGSHISEVTGIPCQSNEFVQE 123
Query: 492 ILXGIRYHFHSLIKGLTLKACSVAQLGLGHSYSRARVKFNVHRVDNMIIQSIAL 653
+L G+R HF I L AQLGLGHSYSRA+VKFNV+RVDNM+IQ+I L
Sbjct: 124 LLRGVRLHFDRFISELKKSDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFL 177
>07_03_1578 +
27872636-27872840,27872928-27873175,27873215-27873295,
27873665-27873822,27874391-27874450,27874655-27874873,
27875100-27875201,27875352-27875500,27875582-27875734,
27875839-27876194
Length = 576
Score = 116 bits (278), Expect(2) = 2e-37
Identities = 62/150 (41%), Positives = 89/150 (59%), Gaps = 2/150 (1%)
Frame = +3
Query: 138 YVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVALENI 317
Y+LFE ++G+ALF +E+ + SV +LQRF+ V L F P SA+ AL
Sbjct: 4 YLLFESASGYALFHAHGVDEIGQGVDAARASVLELQRFSKAVKLAGFSPFSSAVDALNQC 63
Query: 318 NAVSEGILPEDLNLFLEGGLPKRK--KRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPE 491
NA+SEGI+ ++L FLE LPK K K++K ++GV++PK+G+ ISEA I C V E
Sbjct: 64 NAISEGIMTDELRSFLELNLPKVKEGKKAKYSVGVMEPKVGSHISEATGIPCQCNEFVQE 123
Query: 492 ILXGIRYHFHSLIKGLTLKACSVAQLGLGH 581
+L G+R HF I L + + A + GH
Sbjct: 124 LLRGVRLHFDHFIDQLKVVDFTFALVSTGH 153
Score = 58.0 bits (134), Expect(2) = 2e-37
Identities = 26/31 (83%), Positives = 30/31 (96%)
Frame = +3
Query: 561 AQLGLGHSYSRARVKFNVHRVDNMIIQSIAL 653
AQLGLGHSYSRA+VKFNV+RVDNM+IQ+I L
Sbjct: 185 AQLGLGHSYSRAKVKFNVNRVDNMVIQAIFL 215
>03_02_0999 -
13105030-13105434,13105716-13105850,13105933-13106133,
13106374-13106673,13106764-13106964,13107246-13107410,
13107484-13107663,13108171-13108212,13108327-13108404
Length = 568
Score = 92.7 bits (220), Expect = 2e-19
Identities = 64/171 (37%), Positives = 86/171 (50%)
Frame = +3
Query: 141 VLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVALENIN 320
VLFE AGFALF+V + +L + + + T VV L AF ++ AL
Sbjct: 3 VLFETPAGFALFKVLDEGKLDK-VEDLWKEFTTSDSARKVVELKAFNKFENTSDALSAAT 61
Query: 321 AVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILX 500
+ + + L FL+ K TL V D KLG AI E L+I C H AV E++
Sbjct: 62 LIIDSKPTKGLRKFLQ------KHCEGETLAVADSKLGNAIKEKLKIDCLHNSAVMELMR 115
Query: 501 GIRYHFHSLIKGLTLKACSVAQLGLGHSYSRARVKFNVHRVDNMIIQSIAL 653
G+R LI GL + LGL HS SR ++KF+ +VD MIIQ+I L
Sbjct: 116 GLRNQLTELISGLGAQDLGPMSLGLSHSLSRYKLKFSPEKVDTMIIQAIGL 166
>03_02_0998 -
13097675-13098079,13098307-13098441,13098522-13098722,
13099060-13099359,13099449-13099649,13099932-13100096,
13100170-13100349,13100896-13100937,13101040-13101117
Length = 568
Score = 92.7 bits (220), Expect = 2e-19
Identities = 64/171 (37%), Positives = 86/171 (50%)
Frame = +3
Query: 141 VLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVALENIN 320
VLFE AGFALF+V + +L + + + T VV L AF ++ AL
Sbjct: 3 VLFETPAGFALFKVLDEGKLDK-VEDLWKEFTTSDSARKVVELKAFNKFENTSDALSAAT 61
Query: 321 AVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILX 500
+ + + L FL+ K TL V D KLG AI E L+I C H AV E++
Sbjct: 62 LIIDSKPTKGLRKFLQ------KHCEGETLAVADSKLGNAIKEKLKIDCLHNSAVMELMR 115
Query: 501 GIRYHFHSLIKGLTLKACSVAQLGLGHSYSRARVKFNVHRVDNMIIQSIAL 653
G+R LI GL + LGL HS SR ++KF+ +VD MIIQ+I L
Sbjct: 116 GLRNQLTELISGLGAQDLGPMSLGLSHSLSRYKLKFSPEKVDTMIIQAIGL 166
>12_02_1165 +
26633371-26633679,26635183-26635276,26635732-26635822,
26636112-26636199,26636300-26636341,26636648-26636809,
26636915-26637094,26637280-26637447,26637977-26638195
Length = 450
Score = 35.1 bits (77), Expect = 0.049
Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
Frame = +3
Query: 141 VLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVALENIN 320
+LFE +GFA+FRV++ L + + S TD + VV I F V + N
Sbjct: 172 MLFETPSGFAMFRVSDV--LFRYPEDIWSSFTDPHTAHQVVRTIGFIEVGDKSVVWD--N 227
Query: 321 AVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTG-AVPEIL 497
+ G ED+ F+ K +L V D +L I + L I C G VPE++
Sbjct: 228 DIGPG---EDIEHFI-------LKFPIKSLVVPDAQLKFIIEKNLNISCWFNGRIVPELI 277
Query: 498 XGIRY 512
G+ Y
Sbjct: 278 WGLNY 282
>09_02_0393 +
8510089-8510274,8510450-8510806,8510889-8511011,
8511209-8511523,8511576-8511682,8512559-8512629,
8512952-8513029,8513390-8513454,8514224-8514274,
8514373-8514414,8514785-8515105,8515154-8517880
Length = 1480
Score = 31.9 bits (69), Expect = 0.46
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
Frame = +3
Query: 348 DLNLFLEGGLPKRKKR-SKCTLGVLDP--KLGAAISEALEIQCTHTGAVPEILXGIRYHF 518
DL L + GL +++ R S+CT +LDP G + L I G + ++ H
Sbjct: 594 DLGLIDQEGLCRKESRISRCTSSLLDPLEVYGREDEKKLIISSLLDGCLTFKKRRLKEHE 653
Query: 519 HSLIKGLTLKACSVAQLGLGHSYSRARVKFNVHRVDN 629
+ K ++ S+ +G + AR+ +N RV N
Sbjct: 654 YETCKAGAVRLISIVAMGGMGKTTLARLVYNDARVQN 690
>04_01_0275 + 3648866-3649951
Length = 361
Score = 27.9 bits (59), Expect = 7.5
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +3
Query: 180 VAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSA--IVALENINAVSEGILPEDL 353
V E +E AFLP+ +ESV L V + +P ++A LE I +S+ ++ L
Sbjct: 95 VRELDEALAFLPEFQESVLILHIATNVFYGLCIEPDQNAASFKQLEAIKTLSDYMV--FL 152
Query: 354 NLFLEGGLPKRKKRS 398
G LP K RS
Sbjct: 153 VAVRPGMLPGLKLRS 167
>11_06_0190 -
21071831-21071947,21072164-21072259,21072883-21072975,
21073099-21073143,21073241-21073300,21074462-21074506
Length = 151
Score = 27.5 bits (58), Expect = 9.9
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +3
Query: 219 VEESVTDLQRFNAVVTLIAFQPHKSAI--VALENINAVSEGILPEDLNLFLEGGLPKRK 389
+E S++D+ + + L AFQ ++A V +EN+ E + ED+N L GLP RK
Sbjct: 34 LEVSISDMMQ----ILLNAFQIRENACNGVHVENLTDEYESTV-EDVNQILMKGLPNRK 87
>06_01_1076 - 8778210-8778734
Length = 174
Score = 27.5 bits (58), Expect = 9.9
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +2
Query: 416 TGSQ-ARSSHQRGPGNSVHAYRSSPGDFXRHTLSLPLA--HQRPYPQSMQCGTAWSWPLI 586
TG+Q A + GPGNSVHA H + L + R + S++ +W ++
Sbjct: 7 TGNQQATQQGKAGPGNSVHAGNEVSFSILTHGIHLKFVRLYHRHHLASLKLKVSW---VL 63
Query: 587 LTSSCQVQCS 616
SS CS
Sbjct: 64 GASSISFLCS 73
>05_06_0075 - 25379820-25380776,25380851-25381179,25381255-25381453
Length = 494
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -1
Query: 397 DRFFLFGRPPSRNRFKSSGRIPSDTALIFSKATIADLCGWKAIKVTT 257
DR + G+ PSR+ +GR + T K I + GW VT+
Sbjct: 88 DRKYRNGKRPSRSTEDKAGRWKASTGKTEGKDPITECYGWVKFCVTS 134
>04_03_0055 +
10299539-10299703,10300042-10300746,10301025-10301116,
10302896-10303313
Length = 459
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -1
Query: 502 PXKISGTAPVCVH*ISRASLMAAPSLGSSTPSVHFDRFFLFGRPPSRNRFKSSGR 338
P + T+P+ + +++P S PS H R F+F + P+ N + GR
Sbjct: 324 PLVLHATSPLRLLCTLHGPRLSSPK-PSHQPSTHLPRCFIFPQNPTSNELELMGR 377
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,313,240
Number of Sequences: 37544
Number of extensions: 359464
Number of successful extensions: 914
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 910
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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