BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_C07 (655 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 03_02_1010 - 13194002-13194339,13194421-13194573,13194661-131948... 165 4e-41 07_03_1578 + 27872636-27872840,27872928-27873175,27873215-278732... 116 2e-37 03_02_0999 - 13105030-13105434,13105716-13105850,13105933-131061... 93 2e-19 03_02_0998 - 13097675-13098079,13098307-13098441,13098522-130987... 93 2e-19 12_02_1165 + 26633371-26633679,26635183-26635276,26635732-266358... 35 0.049 09_02_0393 + 8510089-8510274,8510450-8510806,8510889-8511011,851... 32 0.46 04_01_0275 + 3648866-3649951 28 7.5 11_06_0190 - 21071831-21071947,21072164-21072259,21072883-210729... 27 9.9 06_01_1076 - 8778210-8778734 27 9.9 05_06_0075 - 25379820-25380776,25380851-25381179,25381255-25381453 27 9.9 04_03_0055 + 10299539-10299703,10300042-10300746,10301025-103011... 27 9.9 >03_02_1010 - 13194002-13194339,13194421-13194573,13194661-13194809, 13194932-13195184,13195282-13195469,13195684-13195841, 13196093-13196307,13196410-13196614 Length = 552 Score = 165 bits (400), Expect = 4e-41 Identities = 86/174 (49%), Positives = 111/174 (63%), Gaps = 2/174 (1%) Frame = +3 Query: 138 YVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVALENI 317 Y+LFE ++G+ LF +E+ + V SV DL RF V L AF P SA+ AL Sbjct: 4 YLLFESASGYGLFHAYGIDEIGQSVDAVRASVVDLDRFGKAVKLAAFTPFSSAVDALNQC 63 Query: 318 NAVSEGILPEDLNLFLEGGLPKRK--KRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPE 491 NA+SEGI+ ++L FLE LPK K K++K +LGV++PK+G+ ISE I C V E Sbjct: 64 NAISEGIMTDELRSFLELNLPKPKEGKKAKYSLGVVEPKVGSHISEVTGIPCQSNEFVQE 123 Query: 492 ILXGIRYHFHSLIKGLTLKACSVAQLGLGHSYSRARVKFNVHRVDNMIIQSIAL 653 +L G+R HF I L AQLGLGHSYSRA+VKFNV+RVDNM+IQ+I L Sbjct: 124 LLRGVRLHFDRFISELKKSDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFL 177 >07_03_1578 + 27872636-27872840,27872928-27873175,27873215-27873295, 27873665-27873822,27874391-27874450,27874655-27874873, 27875100-27875201,27875352-27875500,27875582-27875734, 27875839-27876194 Length = 576 Score = 116 bits (278), Expect(2) = 2e-37 Identities = 62/150 (41%), Positives = 89/150 (59%), Gaps = 2/150 (1%) Frame = +3 Query: 138 YVLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVALENI 317 Y+LFE ++G+ALF +E+ + SV +LQRF+ V L F P SA+ AL Sbjct: 4 YLLFESASGYALFHAHGVDEIGQGVDAARASVLELQRFSKAVKLAGFSPFSSAVDALNQC 63 Query: 318 NAVSEGILPEDLNLFLEGGLPKRK--KRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPE 491 NA+SEGI+ ++L FLE LPK K K++K ++GV++PK+G+ ISEA I C V E Sbjct: 64 NAISEGIMTDELRSFLELNLPKVKEGKKAKYSVGVMEPKVGSHISEATGIPCQCNEFVQE 123 Query: 492 ILXGIRYHFHSLIKGLTLKACSVAQLGLGH 581 +L G+R HF I L + + A + GH Sbjct: 124 LLRGVRLHFDHFIDQLKVVDFTFALVSTGH 153 Score = 58.0 bits (134), Expect(2) = 2e-37 Identities = 26/31 (83%), Positives = 30/31 (96%) Frame = +3 Query: 561 AQLGLGHSYSRARVKFNVHRVDNMIIQSIAL 653 AQLGLGHSYSRA+VKFNV+RVDNM+IQ+I L Sbjct: 185 AQLGLGHSYSRAKVKFNVNRVDNMVIQAIFL 215 >03_02_0999 - 13105030-13105434,13105716-13105850,13105933-13106133, 13106374-13106673,13106764-13106964,13107246-13107410, 13107484-13107663,13108171-13108212,13108327-13108404 Length = 568 Score = 92.7 bits (220), Expect = 2e-19 Identities = 64/171 (37%), Positives = 86/171 (50%) Frame = +3 Query: 141 VLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVALENIN 320 VLFE AGFALF+V + +L + + + T VV L AF ++ AL Sbjct: 3 VLFETPAGFALFKVLDEGKLDK-VEDLWKEFTTSDSARKVVELKAFNKFENTSDALSAAT 61 Query: 321 AVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILX 500 + + + L FL+ K TL V D KLG AI E L+I C H AV E++ Sbjct: 62 LIIDSKPTKGLRKFLQ------KHCEGETLAVADSKLGNAIKEKLKIDCLHNSAVMELMR 115 Query: 501 GIRYHFHSLIKGLTLKACSVAQLGLGHSYSRARVKFNVHRVDNMIIQSIAL 653 G+R LI GL + LGL HS SR ++KF+ +VD MIIQ+I L Sbjct: 116 GLRNQLTELISGLGAQDLGPMSLGLSHSLSRYKLKFSPEKVDTMIIQAIGL 166 >03_02_0998 - 13097675-13098079,13098307-13098441,13098522-13098722, 13099060-13099359,13099449-13099649,13099932-13100096, 13100170-13100349,13100896-13100937,13101040-13101117 Length = 568 Score = 92.7 bits (220), Expect = 2e-19 Identities = 64/171 (37%), Positives = 86/171 (50%) Frame = +3 Query: 141 VLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVALENIN 320 VLFE AGFALF+V + +L + + + T VV L AF ++ AL Sbjct: 3 VLFETPAGFALFKVLDEGKLDK-VEDLWKEFTTSDSARKVVELKAFNKFENTSDALSAAT 61 Query: 321 AVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTGAVPEILX 500 + + + L FL+ K TL V D KLG AI E L+I C H AV E++ Sbjct: 62 LIIDSKPTKGLRKFLQ------KHCEGETLAVADSKLGNAIKEKLKIDCLHNSAVMELMR 115 Query: 501 GIRYHFHSLIKGLTLKACSVAQLGLGHSYSRARVKFNVHRVDNMIIQSIAL 653 G+R LI GL + LGL HS SR ++KF+ +VD MIIQ+I L Sbjct: 116 GLRNQLTELISGLGAQDLGPMSLGLSHSLSRYKLKFSPEKVDTMIIQAIGL 166 >12_02_1165 + 26633371-26633679,26635183-26635276,26635732-26635822, 26636112-26636199,26636300-26636341,26636648-26636809, 26636915-26637094,26637280-26637447,26637977-26638195 Length = 450 Score = 35.1 bits (77), Expect = 0.049 Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 1/125 (0%) Frame = +3 Query: 141 VLFEHSAGFALFRVAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSAIVALENIN 320 +LFE +GFA+FRV++ L + + S TD + VV I F V + N Sbjct: 172 MLFETPSGFAMFRVSDV--LFRYPEDIWSSFTDPHTAHQVVRTIGFIEVGDKSVVWD--N 227 Query: 321 AVSEGILPEDLNLFLEGGLPKRKKRSKCTLGVLDPKLGAAISEALEIQCTHTG-AVPEIL 497 + G ED+ F+ K +L V D +L I + L I C G VPE++ Sbjct: 228 DIGPG---EDIEHFI-------LKFPIKSLVVPDAQLKFIIEKNLNISCWFNGRIVPELI 277 Query: 498 XGIRY 512 G+ Y Sbjct: 278 WGLNY 282 >09_02_0393 + 8510089-8510274,8510450-8510806,8510889-8511011, 8511209-8511523,8511576-8511682,8512559-8512629, 8512952-8513029,8513390-8513454,8514224-8514274, 8514373-8514414,8514785-8515105,8515154-8517880 Length = 1480 Score = 31.9 bits (69), Expect = 0.46 Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 3/97 (3%) Frame = +3 Query: 348 DLNLFLEGGLPKRKKR-SKCTLGVLDP--KLGAAISEALEIQCTHTGAVPEILXGIRYHF 518 DL L + GL +++ R S+CT +LDP G + L I G + ++ H Sbjct: 594 DLGLIDQEGLCRKESRISRCTSSLLDPLEVYGREDEKKLIISSLLDGCLTFKKRRLKEHE 653 Query: 519 HSLIKGLTLKACSVAQLGLGHSYSRARVKFNVHRVDN 629 + K ++ S+ +G + AR+ +N RV N Sbjct: 654 YETCKAGAVRLISIVAMGGMGKTTLARLVYNDARVQN 690 >04_01_0275 + 3648866-3649951 Length = 361 Score = 27.9 bits (59), Expect = 7.5 Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 2/75 (2%) Frame = +3 Query: 180 VAEFEELAAFLPQVEESVTDLQRFNAVVTLIAFQPHKSA--IVALENINAVSEGILPEDL 353 V E +E AFLP+ +ESV L V + +P ++A LE I +S+ ++ L Sbjct: 95 VRELDEALAFLPEFQESVLILHIATNVFYGLCIEPDQNAASFKQLEAIKTLSDYMV--FL 152 Query: 354 NLFLEGGLPKRKKRS 398 G LP K RS Sbjct: 153 VAVRPGMLPGLKLRS 167 >11_06_0190 - 21071831-21071947,21072164-21072259,21072883-21072975, 21073099-21073143,21073241-21073300,21074462-21074506 Length = 151 Score = 27.5 bits (58), Expect = 9.9 Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%) Frame = +3 Query: 219 VEESVTDLQRFNAVVTLIAFQPHKSAI--VALENINAVSEGILPEDLNLFLEGGLPKRK 389 +E S++D+ + + L AFQ ++A V +EN+ E + ED+N L GLP RK Sbjct: 34 LEVSISDMMQ----ILLNAFQIRENACNGVHVENLTDEYESTV-EDVNQILMKGLPNRK 87 >06_01_1076 - 8778210-8778734 Length = 174 Score = 27.5 bits (58), Expect = 9.9 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 3/70 (4%) Frame = +2 Query: 416 TGSQ-ARSSHQRGPGNSVHAYRSSPGDFXRHTLSLPLA--HQRPYPQSMQCGTAWSWPLI 586 TG+Q A + GPGNSVHA H + L + R + S++ +W ++ Sbjct: 7 TGNQQATQQGKAGPGNSVHAGNEVSFSILTHGIHLKFVRLYHRHHLASLKLKVSW---VL 63 Query: 587 LTSSCQVQCS 616 SS CS Sbjct: 64 GASSISFLCS 73 >05_06_0075 - 25379820-25380776,25380851-25381179,25381255-25381453 Length = 494 Score = 27.5 bits (58), Expect = 9.9 Identities = 15/47 (31%), Positives = 22/47 (46%) Frame = -1 Query: 397 DRFFLFGRPPSRNRFKSSGRIPSDTALIFSKATIADLCGWKAIKVTT 257 DR + G+ PSR+ +GR + T K I + GW VT+ Sbjct: 88 DRKYRNGKRPSRSTEDKAGRWKASTGKTEGKDPITECYGWVKFCVTS 134 >04_03_0055 + 10299539-10299703,10300042-10300746,10301025-10301116, 10302896-10303313 Length = 459 Score = 27.5 bits (58), Expect = 9.9 Identities = 15/55 (27%), Positives = 26/55 (47%) Frame = -1 Query: 502 PXKISGTAPVCVH*ISRASLMAAPSLGSSTPSVHFDRFFLFGRPPSRNRFKSSGR 338 P + T+P+ + +++P S PS H R F+F + P+ N + GR Sbjct: 324 PLVLHATSPLRLLCTLHGPRLSSPK-PSHQPSTHLPRCFIFPQNPTSNELELMGR 377 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,313,240 Number of Sequences: 37544 Number of extensions: 359464 Number of successful extensions: 914 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 891 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 910 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1632177336 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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