Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_C07
         (655 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    24   3.7  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    24   3.7  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    24   4.8  

>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +2

Query: 398 KMHTRCTGSQARSSHQRGPGNSVHAYRSSPGDFXRHTLSL 517
           K HT CTG    S+ + G  N +     +  +F   T SL
Sbjct: 59  KHHTHCTGLSRDSTRELGRNNQLLWLCKNCNEFRNGTNSL 98


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -2

Query: 216  EAGK-PLTLQIQQRGTTQSPRCVRITH 139
            EAG+ P  + +++RG   SPR VR  H
Sbjct: 1111 EAGEAPPPIPMRRRGLPPSPRTVRARH 1137


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +2

Query: 221 RRVRDRFATF*CCCDFN 271
           RRV DRF+   CCC F+
Sbjct: 139 RRV-DRFSKIYCCCHFS 154


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 681,925
Number of Sequences: 2352
Number of extensions: 13799
Number of successful extensions: 29
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)