Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_C06
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    23   2.2  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   6.7  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   8.8  

>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 539 AGTYGKPSIGPKEAEKNVRNFSE 607
           AGTYG    GP   E  V  ++E
Sbjct: 280 AGTYGGSDAGPYTREMGVIGYNE 302


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 523 VTGQKGWNLREAVNRTER 576
           V+ QK W L   +N TER
Sbjct: 268 VSKQKRWELARNLNLTER 285


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = +3

Query: 387 WPSSAWRISTLSSKPQDSWVY 449
           W   A   S L  +P D W Y
Sbjct: 220 WAGFADSHSPLYKRPHDQWAY 240


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,161
Number of Sequences: 336
Number of extensions: 3631
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)