BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_C06 (650 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Y17704-1|CAA76824.2| 401|Anopheles gambiae hypothetical protein... 24 3.6 AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein. 24 4.8 M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 23 8.4 AF080566-1|AAC31946.1| 308|Anopheles gambiae abdominal-A homeot... 23 8.4 >Y17704-1|CAA76824.2| 401|Anopheles gambiae hypothetical protein protein. Length = 401 Score = 24.2 bits (50), Expect = 3.6 Identities = 11/21 (52%), Positives = 16/21 (76%) Frame = +3 Query: 567 DRKKLRRTCETSPRSSSGLVR 629 + +KLRRT E + +SS+ LVR Sbjct: 337 ETEKLRRTVEQTGKSSAELVR 357 >AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein. Length = 1356 Score = 23.8 bits (49), Expect = 4.8 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 3/47 (6%) Frame = -2 Query: 523 LQADHDGVEILS---LPQVDSLKSFLCRYTQLSCGFEESVDILHALE 392 LQ DH+ + L+ +DSLK +Y +++ + D LH L+ Sbjct: 845 LQLDHNLLTALNGFEFEGLDSLKELFLQYNRIASIANHTFDHLHGLK 891 >M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles gambiae RT2 retroposon. ). Length = 1222 Score = 23.0 bits (47), Expect = 8.4 Identities = 8/28 (28%), Positives = 15/28 (53%) Frame = +3 Query: 204 QIQRGAGPRVLGMDSDDHRRTREHLRAI 287 ++Q R LG+ DH + R+H+ + Sbjct: 783 EVQSSRSIRYLGVQLQDHLKWRDHVTKV 810 >AF080566-1|AAC31946.1| 308|Anopheles gambiae abdominal-A homeotic protein protein. Length = 308 Score = 23.0 bits (47), Expect = 8.4 Identities = 11/29 (37%), Positives = 15/29 (51%) Frame = +1 Query: 262 EPENTSGRYGQLLRSA*RRHSSVQASQQH 348 E E + L+SA + HS QA Q+H Sbjct: 210 EREEQDKMKNESLKSAQQHHSQKQAQQEH 238 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 746,034 Number of Sequences: 2352 Number of extensions: 16110 Number of successful extensions: 34 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 28 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 34 length of database: 563,979 effective HSP length: 62 effective length of database: 418,155 effective search space used: 64395870 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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