Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_C05
(643 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_28350| Best HMM Match : BTB (HMM E-Value=1.1e-38) 34 0.085
SB_37574| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_54322| Best HMM Match : Kelch_1 (HMM E-Value=0) 31 0.60
SB_18446| Best HMM Match : Kelch_1 (HMM E-Value=0) 31 1.1
SB_26836| Best HMM Match : BTB (HMM E-Value=1.1e-37) 30 1.4
SB_40385| Best HMM Match : Kelch_1 (HMM E-Value=0) 30 1.4
SB_34102| Best HMM Match : Kelch_1 (HMM E-Value=0) 30 1.8
SB_13053| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_6593| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_49953| Best HMM Match : BTB (HMM E-Value=2.9e-18) 28 5.6
SB_48518| Best HMM Match : Kelch_1 (HMM E-Value=0) 28 7.4
SB_15301| Best HMM Match : Kelch_1 (HMM E-Value=0) 28 7.4
SB_55145| Best HMM Match : Kelch_1 (HMM E-Value=0) 27 9.8
SB_52407| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_38405| Best HMM Match : BACK (HMM E-Value=0) 27 9.8
SB_18403| Best HMM Match : BACK (HMM E-Value=0) 27 9.8
>SB_28350| Best HMM Match : BTB (HMM E-Value=1.1e-38)
Length = 518
Score = 34.3 bits (75), Expect = 0.085
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +1
Query: 268 LXVTLAAEGRLLQAHKLXLSVCSPYFQ 348
L VTL +G ++AH++ L+ CSPYF+
Sbjct: 39 LDVTLHVQGEEIKAHRVVLAACSPYFR 65
>SB_37574| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 559
Score = 32.7 bits (71), Expect = 0.26
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = +2
Query: 329 YVLPIFNEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQ 508
Y +FN ++ ++ I+ +KD+ ++ L++F Y G V + E + + ++TA LQ
Sbjct: 36 YFYAMFNG--ELAESKQKIITMKDILPDYMQVLVEFAYTGRVEITVENVQNLLATASLLQ 93
>SB_54322| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 587
Score = 31.5 bits (68), Expect = 0.60
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +2
Query: 326 QYVLPIF-NEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQ 502
+Y +F +EM + N P V L+++ S + +L ++Y GE+ V + I++A
Sbjct: 53 KYFYGLFTSEMIEKNA---PSVKLQELRASVMNHILTYLYTGEITVTELNAEDLIASANY 109
Query: 503 LQVKGLTG 526
L + L G
Sbjct: 110 LLIPRLKG 117
>SB_18446| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 571
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +2
Query: 344 FNEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQL 505
FN +F M Q V LK + + DLL ++Y G++ V + F++ A+ L
Sbjct: 46 FNGLFSSSMRERQENTVNLKQFPVNIMEDLLTYLYTGKLEVTEATAQDFLAAADFL 101
>SB_26836| Best HMM Match : BTB (HMM E-Value=1.1e-37)
Length = 521
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +2
Query: 338 PIFNEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQV 511
P F +F + + V ++ + LL F+Y G +NV +E + + A+ LQ+
Sbjct: 57 PYFEVLFSGGLRESYLDTVTIQGIDSETFSALLDFIYTGVINVNEENVQQLLPAAKMLQL 116
>SB_40385| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 823
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 338 PIFNEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQV 511
P F MF +M ++ + ++DV SA+ L+ F Y + +++ + + + A LQ+
Sbjct: 82 PYFRAMFTREMAESRQAEITIRDVDESAMNLLITFAYTASITIEETNVQTLLPAACLLQL 141
>SB_34102| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 628
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/53 (20%), Positives = 30/53 (56%)
Frame = +2
Query: 362 MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGL 520
M+ ++ V L+++ A+++++ F Y G++ + + + + A LQV+ +
Sbjct: 66 MSESRQDTVTLQELDEKAMQNMIDFFYSGKIEISELNVQEVLPIACLLQVQSV 118
>SB_13053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 581
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +2
Query: 338 PIFNEMFKMNP---TQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQ 508
P F MF N TQ I L D+ AL+ ++++ Y G++ + ++ + + + LQ
Sbjct: 56 PYFRAMFTSNLLECTQRTIT-LYDIDVGALQQIVEYFYTGKITIDEDNVQFLLHASCLLQ 114
Query: 509 V 511
V
Sbjct: 115 V 115
>SB_6593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 205 EQLSTQICQRAFMACCRV-EISLXVTLAAEGRLLQAHKLXLSVCSPYFQ 348
E S ++C AF+ R E+ VTL R + HK+ L+ SPYF+
Sbjct: 28 EAFSDELC--AFLQSQRNDEVLCDVTLRHNERRIPCHKVVLAARSPYFR 74
>SB_49953| Best HMM Match : BTB (HMM E-Value=2.9e-18)
Length = 123
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 274 VTLAAEGRLLQAHKLXLSVCSPYFQRNVQNESNTTSD 384
+TL A +L AH++ L+ SPYF+ + +N ++
Sbjct: 43 ITLKAGNLVLSAHRVVLAALSPYFRELLLPTNNEKAE 79
>SB_48518| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 481
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +2
Query: 386 VFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGL 520
V L+DV A+ L+ F Y G++++ E + S + + Q+ +
Sbjct: 88 VTLRDVDSGAVELLVDFAYTGKLDITTENVQSIMYASSLFQLNAI 132
>SB_15301| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 590
Score = 27.9 bits (59), Expect = 7.4
Identities = 14/64 (21%), Positives = 31/64 (48%)
Frame = +2
Query: 329 YVLPIFNEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQ 508
Y +FN M + +V + V+ ++R +L F+Y GE+ + + + + A +
Sbjct: 58 YFFAMFNG--NMKESSQDVVTITGVTPDSMRSILNFIYTGEIVLDWDNVELILQGANLML 115
Query: 509 VKGL 520
V+ +
Sbjct: 116 VQSV 119
>SB_55145| Best HMM Match : Kelch_1 (HMM E-Value=0)
Length = 625
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 274 VTLAAEGRLLQAHKLXLSVCSPYFQRNVQNESNTTSDSI 390
VT+ A R ++ H++ L+ CS YF N +S +
Sbjct: 36 VTIKAGERKIRCHRVVLASCSAYFHSMFTNSMLESSQEV 74
>SB_52407| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 613
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
Frame = +3
Query: 147 FHXRXRSLSW---RRTNNFHYAGTTFHANMSAGF 239
FH R+L W R + N HYAG F S F
Sbjct: 87 FHRGLRALEWLINRGSYNTHYAGIVFSFGASVAF 120
>SB_38405| Best HMM Match : BACK (HMM E-Value=0)
Length = 423
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 250 CRVEISLXVTLAAEGRLLQAHKLXLSVCSPYFQRNVQNE 366
C E+ V L + R+ AH+L L+ CS YF +E
Sbjct: 37 CNSELCDVVLLVGDRRIY-AHRLVLAACSQYFHAMFTSE 74
>SB_18403| Best HMM Match : BACK (HMM E-Value=0)
Length = 423
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +1
Query: 250 CRVEISLXVTLAAEGRLLQAHKLXLSVCSPYFQRNVQNE 366
C E+ V L + R+ AH+L L+ CS YF +E
Sbjct: 37 CNSELCDVVLLVGDRRIY-AHRLVLAACSQYFHAMFTSE 74
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,487,484
Number of Sequences: 59808
Number of extensions: 310797
Number of successful extensions: 626
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1620947750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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