BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_C05 (643 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_28350| Best HMM Match : BTB (HMM E-Value=1.1e-38) 34 0.085 SB_37574| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26 SB_54322| Best HMM Match : Kelch_1 (HMM E-Value=0) 31 0.60 SB_18446| Best HMM Match : Kelch_1 (HMM E-Value=0) 31 1.1 SB_26836| Best HMM Match : BTB (HMM E-Value=1.1e-37) 30 1.4 SB_40385| Best HMM Match : Kelch_1 (HMM E-Value=0) 30 1.4 SB_34102| Best HMM Match : Kelch_1 (HMM E-Value=0) 30 1.8 SB_13053| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8 SB_6593| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2 SB_49953| Best HMM Match : BTB (HMM E-Value=2.9e-18) 28 5.6 SB_48518| Best HMM Match : Kelch_1 (HMM E-Value=0) 28 7.4 SB_15301| Best HMM Match : Kelch_1 (HMM E-Value=0) 28 7.4 SB_55145| Best HMM Match : Kelch_1 (HMM E-Value=0) 27 9.8 SB_52407| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8 SB_38405| Best HMM Match : BACK (HMM E-Value=0) 27 9.8 SB_18403| Best HMM Match : BACK (HMM E-Value=0) 27 9.8 >SB_28350| Best HMM Match : BTB (HMM E-Value=1.1e-38) Length = 518 Score = 34.3 bits (75), Expect = 0.085 Identities = 13/27 (48%), Positives = 20/27 (74%) Frame = +1 Query: 268 LXVTLAAEGRLLQAHKLXLSVCSPYFQ 348 L VTL +G ++AH++ L+ CSPYF+ Sbjct: 39 LDVTLHVQGEEIKAHRVVLAACSPYFR 65 >SB_37574| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 559 Score = 32.7 bits (71), Expect = 0.26 Identities = 16/60 (26%), Positives = 33/60 (55%) Frame = +2 Query: 329 YVLPIFNEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQ 508 Y +FN ++ ++ I+ +KD+ ++ L++F Y G V + E + + ++TA LQ Sbjct: 36 YFYAMFNG--ELAESKQKIITMKDILPDYMQVLVEFAYTGRVEITVENVQNLLATASLLQ 93 >SB_54322| Best HMM Match : Kelch_1 (HMM E-Value=0) Length = 587 Score = 31.5 bits (68), Expect = 0.60 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Frame = +2 Query: 326 QYVLPIF-NEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQ 502 +Y +F +EM + N P V L+++ S + +L ++Y GE+ V + I++A Sbjct: 53 KYFYGLFTSEMIEKNA---PSVKLQELRASVMNHILTYLYTGEITVTELNAEDLIASANY 109 Query: 503 LQVKGLTG 526 L + L G Sbjct: 110 LLIPRLKG 117 >SB_18446| Best HMM Match : Kelch_1 (HMM E-Value=0) Length = 571 Score = 30.7 bits (66), Expect = 1.1 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%) Frame = +2 Query: 344 FNEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQL 505 FN +F M Q V LK + + DLL ++Y G++ V + F++ A+ L Sbjct: 46 FNGLFSSSMRERQENTVNLKQFPVNIMEDLLTYLYTGKLEVTEATAQDFLAAADFL 101 >SB_26836| Best HMM Match : BTB (HMM E-Value=1.1e-37) Length = 521 Score = 30.3 bits (65), Expect = 1.4 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 2/60 (3%) Frame = +2 Query: 338 PIFNEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQV 511 P F +F + + V ++ + LL F+Y G +NV +E + + A+ LQ+ Sbjct: 57 PYFEVLFSGGLRESYLDTVTIQGIDSETFSALLDFIYTGVINVNEENVQQLLPAAKMLQL 116 >SB_40385| Best HMM Match : Kelch_1 (HMM E-Value=0) Length = 823 Score = 30.3 bits (65), Expect = 1.4 Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 2/60 (3%) Frame = +2 Query: 338 PIFNEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQV 511 P F MF +M ++ + ++DV SA+ L+ F Y + +++ + + + A LQ+ Sbjct: 82 PYFRAMFTREMAESRQAEITIRDVDESAMNLLITFAYTASITIEETNVQTLLPAACLLQL 141 >SB_34102| Best HMM Match : Kelch_1 (HMM E-Value=0) Length = 628 Score = 29.9 bits (64), Expect = 1.8 Identities = 11/53 (20%), Positives = 30/53 (56%) Frame = +2 Query: 362 MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGL 520 M+ ++ V L+++ A+++++ F Y G++ + + + + A LQV+ + Sbjct: 66 MSESRQDTVTLQELDEKAMQNMIDFFYSGKIEISELNVQEVLPIACLLQVQSV 118 >SB_13053| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 581 Score = 29.9 bits (64), Expect = 1.8 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Frame = +2 Query: 338 PIFNEMFKMNP---TQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQ 508 P F MF N TQ I L D+ AL+ ++++ Y G++ + ++ + + + LQ Sbjct: 56 PYFRAMFTSNLLECTQRTIT-LYDIDVGALQQIVEYFYTGKITIDEDNVQFLLHASCLLQ 114 Query: 509 V 511 V Sbjct: 115 V 115 >SB_6593| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 539 Score = 28.7 bits (61), Expect = 4.2 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Frame = +1 Query: 205 EQLSTQICQRAFMACCRV-EISLXVTLAAEGRLLQAHKLXLSVCSPYFQ 348 E S ++C AF+ R E+ VTL R + HK+ L+ SPYF+ Sbjct: 28 EAFSDELC--AFLQSQRNDEVLCDVTLRHNERRIPCHKVVLAARSPYFR 74 >SB_49953| Best HMM Match : BTB (HMM E-Value=2.9e-18) Length = 123 Score = 28.3 bits (60), Expect = 5.6 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = +1 Query: 274 VTLAAEGRLLQAHKLXLSVCSPYFQRNVQNESNTTSD 384 +TL A +L AH++ L+ SPYF+ + +N ++ Sbjct: 43 ITLKAGNLVLSAHRVVLAALSPYFRELLLPTNNEKAE 79 >SB_48518| Best HMM Match : Kelch_1 (HMM E-Value=0) Length = 481 Score = 27.9 bits (59), Expect = 7.4 Identities = 12/45 (26%), Positives = 24/45 (53%) Frame = +2 Query: 386 VFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGL 520 V L+DV A+ L+ F Y G++++ E + S + + Q+ + Sbjct: 88 VTLRDVDSGAVELLVDFAYTGKLDITTENVQSIMYASSLFQLNAI 132 >SB_15301| Best HMM Match : Kelch_1 (HMM E-Value=0) Length = 590 Score = 27.9 bits (59), Expect = 7.4 Identities = 14/64 (21%), Positives = 31/64 (48%) Frame = +2 Query: 329 YVLPIFNEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQ 508 Y +FN M + +V + V+ ++R +L F+Y GE+ + + + + A + Sbjct: 58 YFFAMFNG--NMKESSQDVVTITGVTPDSMRSILNFIYTGEIVLDWDNVELILQGANLML 115 Query: 509 VKGL 520 V+ + Sbjct: 116 VQSV 119 >SB_55145| Best HMM Match : Kelch_1 (HMM E-Value=0) Length = 625 Score = 27.5 bits (58), Expect = 9.8 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = +1 Query: 274 VTLAAEGRLLQAHKLXLSVCSPYFQRNVQNESNTTSDSI 390 VT+ A R ++ H++ L+ CS YF N +S + Sbjct: 36 VTIKAGERKIRCHRVVLASCSAYFHSMFTNSMLESSQEV 74 >SB_52407| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 613 Score = 27.5 bits (58), Expect = 9.8 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 3/34 (8%) Frame = +3 Query: 147 FHXRXRSLSW---RRTNNFHYAGTTFHANMSAGF 239 FH R+L W R + N HYAG F S F Sbjct: 87 FHRGLRALEWLINRGSYNTHYAGIVFSFGASVAF 120 >SB_38405| Best HMM Match : BACK (HMM E-Value=0) Length = 423 Score = 27.5 bits (58), Expect = 9.8 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = +1 Query: 250 CRVEISLXVTLAAEGRLLQAHKLXLSVCSPYFQRNVQNE 366 C E+ V L + R+ AH+L L+ CS YF +E Sbjct: 37 CNSELCDVVLLVGDRRIY-AHRLVLAACSQYFHAMFTSE 74 >SB_18403| Best HMM Match : BACK (HMM E-Value=0) Length = 423 Score = 27.5 bits (58), Expect = 9.8 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = +1 Query: 250 CRVEISLXVTLAAEGRLLQAHKLXLSVCSPYFQRNVQNE 366 C E+ V L + R+ AH+L L+ CS YF +E Sbjct: 37 CNSELCDVVLLVGDRRIY-AHRLVLAACSQYFHAMFTSE 74 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,487,484 Number of Sequences: 59808 Number of extensions: 310797 Number of successful extensions: 626 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 589 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 626 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1620947750 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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