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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_C05
         (643 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_28350| Best HMM Match : BTB (HMM E-Value=1.1e-38)                   34   0.085
SB_37574| Best HMM Match : No HMM Matches (HMM E-Value=.)              33   0.26 
SB_54322| Best HMM Match : Kelch_1 (HMM E-Value=0)                     31   0.60 
SB_18446| Best HMM Match : Kelch_1 (HMM E-Value=0)                     31   1.1  
SB_26836| Best HMM Match : BTB (HMM E-Value=1.1e-37)                   30   1.4  
SB_40385| Best HMM Match : Kelch_1 (HMM E-Value=0)                     30   1.4  
SB_34102| Best HMM Match : Kelch_1 (HMM E-Value=0)                     30   1.8  
SB_13053| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.8  
SB_6593| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   4.2  
SB_49953| Best HMM Match : BTB (HMM E-Value=2.9e-18)                   28   5.6  
SB_48518| Best HMM Match : Kelch_1 (HMM E-Value=0)                     28   7.4  
SB_15301| Best HMM Match : Kelch_1 (HMM E-Value=0)                     28   7.4  
SB_55145| Best HMM Match : Kelch_1 (HMM E-Value=0)                     27   9.8  
SB_52407| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   9.8  
SB_38405| Best HMM Match : BACK (HMM E-Value=0)                        27   9.8  
SB_18403| Best HMM Match : BACK (HMM E-Value=0)                        27   9.8  

>SB_28350| Best HMM Match : BTB (HMM E-Value=1.1e-38)
          Length = 518

 Score = 34.3 bits (75), Expect = 0.085
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +1

Query: 268 LXVTLAAEGRLLQAHKLXLSVCSPYFQ 348
           L VTL  +G  ++AH++ L+ CSPYF+
Sbjct: 39  LDVTLHVQGEEIKAHRVVLAACSPYFR 65


>SB_37574| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 559

 Score = 32.7 bits (71), Expect = 0.26
 Identities = 16/60 (26%), Positives = 33/60 (55%)
 Frame = +2

Query: 329 YVLPIFNEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQ 508
           Y   +FN   ++  ++  I+ +KD+    ++ L++F Y G V +  E + + ++TA  LQ
Sbjct: 36  YFYAMFNG--ELAESKQKIITMKDILPDYMQVLVEFAYTGRVEITVENVQNLLATASLLQ 93


>SB_54322| Best HMM Match : Kelch_1 (HMM E-Value=0)
          Length = 587

 Score = 31.5 bits (68), Expect = 0.60
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
 Frame = +2

Query: 326 QYVLPIF-NEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQ 502
           +Y   +F +EM + N    P V L+++  S +  +L ++Y GE+ V +      I++A  
Sbjct: 53  KYFYGLFTSEMIEKNA---PSVKLQELRASVMNHILTYLYTGEITVTELNAEDLIASANY 109

Query: 503 LQVKGLTG 526
           L +  L G
Sbjct: 110 LLIPRLKG 117


>SB_18446| Best HMM Match : Kelch_1 (HMM E-Value=0)
          Length = 571

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = +2

Query: 344 FNEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQL 505
           FN +F   M   Q   V LK    + + DLL ++Y G++ V +     F++ A+ L
Sbjct: 46  FNGLFSSSMRERQENTVNLKQFPVNIMEDLLTYLYTGKLEVTEATAQDFLAAADFL 101


>SB_26836| Best HMM Match : BTB (HMM E-Value=1.1e-37)
          Length = 521

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = +2

Query: 338 PIFNEMFK--MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQV 511
           P F  +F   +  +    V ++ +       LL F+Y G +NV +E +   +  A+ LQ+
Sbjct: 57  PYFEVLFSGGLRESYLDTVTIQGIDSETFSALLDFIYTGVINVNEENVQQLLPAAKMLQL 116


>SB_40385| Best HMM Match : Kelch_1 (HMM E-Value=0)
          Length = 823

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
 Frame = +2

Query: 338 PIFNEMF--KMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQV 511
           P F  MF  +M  ++   + ++DV  SA+  L+ F Y   + +++  + + +  A  LQ+
Sbjct: 82  PYFRAMFTREMAESRQAEITIRDVDESAMNLLITFAYTASITIEETNVQTLLPAACLLQL 141


>SB_34102| Best HMM Match : Kelch_1 (HMM E-Value=0)
          Length = 628

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 11/53 (20%), Positives = 30/53 (56%)
 Frame = +2

Query: 362 MNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGL 520
           M+ ++   V L+++   A+++++ F Y G++ + +  +   +  A  LQV+ +
Sbjct: 66  MSESRQDTVTLQELDEKAMQNMIDFFYSGKIEISELNVQEVLPIACLLQVQSV 118


>SB_13053| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 581

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = +2

Query: 338 PIFNEMFKMNP---TQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQ 508
           P F  MF  N    TQ  I  L D+   AL+ ++++ Y G++ + ++ +   +  +  LQ
Sbjct: 56  PYFRAMFTSNLLECTQRTIT-LYDIDVGALQQIVEYFYTGKITIDEDNVQFLLHASCLLQ 114

Query: 509 V 511
           V
Sbjct: 115 V 115


>SB_6593| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 539

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +1

Query: 205 EQLSTQICQRAFMACCRV-EISLXVTLAAEGRLLQAHKLXLSVCSPYFQ 348
           E  S ++C  AF+   R  E+   VTL    R +  HK+ L+  SPYF+
Sbjct: 28  EAFSDELC--AFLQSQRNDEVLCDVTLRHNERRIPCHKVVLAARSPYFR 74


>SB_49953| Best HMM Match : BTB (HMM E-Value=2.9e-18)
          Length = 123

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +1

Query: 274 VTLAAEGRLLQAHKLXLSVCSPYFQRNVQNESNTTSD 384
           +TL A   +L AH++ L+  SPYF+  +   +N  ++
Sbjct: 43  ITLKAGNLVLSAHRVVLAALSPYFRELLLPTNNEKAE 79


>SB_48518| Best HMM Match : Kelch_1 (HMM E-Value=0)
          Length = 481

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 12/45 (26%), Positives = 24/45 (53%)
 Frame = +2

Query: 386 VFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQVKGL 520
           V L+DV   A+  L+ F Y G++++  E + S +  +   Q+  +
Sbjct: 88  VTLRDVDSGAVELLVDFAYTGKLDITTENVQSIMYASSLFQLNAI 132


>SB_15301| Best HMM Match : Kelch_1 (HMM E-Value=0)
          Length = 590

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 14/64 (21%), Positives = 31/64 (48%)
 Frame = +2

Query: 329 YVLPIFNEMFKMNPTQHPIVFLKDVSHSALRDLLQFMYQGEVNVKQEELASFISTAEQLQ 508
           Y   +FN    M  +   +V +  V+  ++R +L F+Y GE+ +  + +   +  A  + 
Sbjct: 58  YFFAMFNG--NMKESSQDVVTITGVTPDSMRSILNFIYTGEIVLDWDNVELILQGANLML 115

Query: 509 VKGL 520
           V+ +
Sbjct: 116 VQSV 119


>SB_55145| Best HMM Match : Kelch_1 (HMM E-Value=0)
          Length = 625

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +1

Query: 274 VTLAAEGRLLQAHKLXLSVCSPYFQRNVQNESNTTSDSI 390
           VT+ A  R ++ H++ L+ CS YF     N    +S  +
Sbjct: 36  VTIKAGERKIRCHRVVLASCSAYFHSMFTNSMLESSQEV 74


>SB_52407| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 613

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
 Frame = +3

Query: 147 FHXRXRSLSW---RRTNNFHYAGTTFHANMSAGF 239
           FH   R+L W   R + N HYAG  F    S  F
Sbjct: 87  FHRGLRALEWLINRGSYNTHYAGIVFSFGASVAF 120


>SB_38405| Best HMM Match : BACK (HMM E-Value=0)
          Length = 423

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +1

Query: 250 CRVEISLXVTLAAEGRLLQAHKLXLSVCSPYFQRNVQNE 366
           C  E+   V L  + R+  AH+L L+ CS YF     +E
Sbjct: 37  CNSELCDVVLLVGDRRIY-AHRLVLAACSQYFHAMFTSE 74


>SB_18403| Best HMM Match : BACK (HMM E-Value=0)
          Length = 423

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +1

Query: 250 CRVEISLXVTLAAEGRLLQAHKLXLSVCSPYFQRNVQNE 366
           C  E+   V L  + R+  AH+L L+ CS YF     +E
Sbjct: 37  CNSELCDVVLLVGDRRIY-AHRLVLAACSQYFHAMFTSE 74


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,487,484
Number of Sequences: 59808
Number of extensions: 310797
Number of successful extensions: 626
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1620947750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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