Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_C02
         (433 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    25   0.31 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   1.6  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   2.9  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   3.8  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   3.8  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   6.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    20   8.8  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    20   8.8  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 25.0 bits (52), Expect = 0.31
 Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
 Frame = -1

Query: 418 SNKQIDIXNILGV*LFVSNYHIGFLVL------WTIIHKRMVALTTKDLQVLF 278
           S  Q+ + N+L + L+++ YH+   ++      W+ + + ++ L +KDL   F
Sbjct: 62  SGIQLVVRNLLDISLYLNAYHVFVTMMTLKRHKWSTLFEILLKLESKDLSRTF 114


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +1

Query: 193 KHSYNLIYKYIINDVVXEMRSKFXNTTSEIK 285
           +HS+  IYKY  N V   + +     T+ ++
Sbjct: 36  RHSFYKIYKYTYNIVAVSLTAYMVYITTNLR 66


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +1

Query: 373 KVKLLKCSXCQFV 411
           K+K  KC  C FV
Sbjct: 198 KIKTFKCKQCDFV 210



 Score = 20.6 bits (41), Expect = 6.6
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 331 SSKEQGNRCDNC 366
           ++KE+GN C  C
Sbjct: 465 NNKEEGNSCQYC 476


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = +1

Query: 76  LRIVFLERQVASEAAYKISYFNSTRSRL---FKNWKLIYIPL 192
           L+ V L  Q+     + +++ N    +L   FK+WK++Y  L
Sbjct: 28  LKKVLLLSQIVG--VFPLNHLNEEPEKLHFTFKSWKVLYTSL 67


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.4 bits (43), Expect = 3.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 67  YIIFRKDATAIITLVH 20
           Y IF+K+ T I+ L H
Sbjct: 78  YAIFQKNFTNIVNLTH 93


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 10/38 (26%), Positives = 16/38 (42%)
 Frame = -1

Query: 295 DLQVLFRKLYX*ICSSFXQPRH*LYICRLNCKNVLEEC 182
           DL V    LY   C      +    + R+ C+++  EC
Sbjct: 52  DLGVPIGVLYCMKCECVPLQKKRRIVARVQCRSIKNEC 89


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 235 VVXEMRSKFXNTTSEIKPADLLLS 306
           ++ E+R  F     EIK   LLLS
Sbjct: 225 LLKELREAFEAEAQEIKKPALLLS 248


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -1

Query: 337 WTIIHKRMVALTT 299
           WT  H  + ALTT
Sbjct: 352 WTFCHMMIAALTT 364


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,816
Number of Sequences: 336
Number of extensions: 1806
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9565283
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)