Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_B23
         (593 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_03_0124 + 12526572-12526689,12528205-12528392                       61   6e-10

>09_03_0124 + 12526572-12526689,12528205-12528392
          Length = 101

 Score = 61.3 bits (142), Expect = 6e-10
 Identities = 31/65 (47%), Positives = 42/65 (64%)
 Frame = +3

Query: 291 KFTENPFVPLGCLATAGALSMGLWSFXTGKTRLSXQMMRVRILAQGLTIAALVIGVVITT 470
           K  +NPFVP+G L TAG L+ GL SF  G ++L  ++MR R++AQG T+ AL+IG     
Sbjct: 30  KPVKNPFVPIGALVTAGVLTAGLISFRYGNSKLGQKLMRARVVAQGATV-ALMIGSAYYY 88

Query: 471 GKSSK 485
           G   K
Sbjct: 89  GDQIK 93


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,242,256
Number of Sequences: 37544
Number of extensions: 204674
Number of successful extensions: 376
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 376
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1411925004
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)