Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_B19
(640 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26) 194 5e-50
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 41 0.001
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 39 0.003
SB_22047| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.028
SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) 36 0.037
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 34 0.085
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 34 0.085
SB_25734| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.15
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_49185| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_16955| Best HMM Match : SLAP (HMM E-Value=0.048) 33 0.26
SB_19190| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 32 0.34
SB_39421| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.60
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.79
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 31 0.79
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 31 1.0
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 31 1.0
SB_25940| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_24673| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_9851| Best HMM Match : Hint (HMM E-Value=1.30321e-43) 29 4.2
SB_48488| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_10272| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 28 7.4
SB_41214| Best HMM Match : Gag_spuma (HMM E-Value=2) 28 7.4
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 27 9.7
SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061) 27 9.7
SB_402| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
>SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26)
Length = 205
Score = 194 bits (473), Expect = 5e-50
Identities = 97/172 (56%), Positives = 118/172 (68%)
Frame = +2
Query: 74 MXSSLLDAARNSPFRGPLSPAQCQSTVAPVAIEQTGGMAASAAVPTESCEFGSPKYFAXX 253
M S + A+NS PLS A+C S V + + + ASAA SCEFGS KY+A
Sbjct: 1 MFSRYFETAKNSTLGDPLSVAKCPSDVR--SHRNSSRLMASAAGEQHSCEFGSAKYYALC 58
Query: 254 XXXXXXXXXXTHTAVVPLDLLKCXLQVDAXXYKNVXNGFKVSVREEGVRGLAKGWAPTFI 433
THTAVVPLDL+KC +QVD Y ++ NGFK++++E+GVRGLA+GWAPTFI
Sbjct: 59 GFGGILSCGLTHTAVVPLDLVKCRIQVDPKKYGSMVNGFKITLKEDGVRGLARGWAPTFI 118
Query: 434 GYSMQGLCKFGFYEVXKVAYAGMLXDETAYTYRTFVYLAASASAEFIADIAL 589
GYSMQGL KFGFYEV K+ Y ML +E +Y YRT +YLAASASAEF ADIAL
Sbjct: 119 GYSMQGLGKFGFYEVFKIMYGNMLGEEYSYLYRTSLYLAASASAEFFADIAL 170
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +2
Query: 284 THTAVVPLDLLKCXLQVDAXXYK--NVXNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLC 457
+ TA PLD LK LQV A + +GFK+ +RE G++ L +G I + +
Sbjct: 150 SRTATAPLDRLKVLLQVQASSTNRFGIVSGFKMMLREGGIKSLWRGNGANVIKIAPESGI 209
Query: 458 KFGFYEVXK 484
KF YE K
Sbjct: 210 KFFAYEKAK 218
Score = 35.1 bits (77), Expect = 0.049
Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +2
Query: 284 THTAVVPLDLLKCXLQV-DAXXYKNVXNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCK 460
+ T++ PL++LK L + Y+ + + V ++EG+R +G P+ +G
Sbjct: 244 SQTSIYPLEVLKTRLAIRKTGQYRGLLHAASVIYQKEGIRSFYRGLFPSLLGIIPYAGID 303
Query: 461 FGFYEVXKVAYAGMLXDETA 520
YE K Y +++A
Sbjct: 304 LAVYETLKNFYLNYHKNQSA 323
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/72 (37%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Frame = +2
Query: 302 PLDLLKCXLQVDAXX----YKNVXNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGF 469
PLD+++ +Q++ Y + +GFKV VR EG GL KG P + + +F
Sbjct: 701 PLDVVRRRMQMERGEGMFKYSSTWDGFKVIVRSEGFIGLFKGMWPNLLKVAPTIGIQFAV 760
Query: 470 YEVXKVA-YAGM 502
YEV K A YA M
Sbjct: 761 YEVSKSAMYARM 772
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +2
Query: 302 PLDLLKCXLQV-DAXXYKNVXNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEV 478
PLD+++ L + Y + N F R+EG+R +G+ PT IG F YE
Sbjct: 9 PLDMVRARLAITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISFFTYET 68
Query: 479 XKVAY 493
K A+
Sbjct: 69 CKKAF 73
>SB_22047| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 421
Score = 35.9 bits (79), Expect = 0.028
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +2
Query: 290 TAVVPLDLLKCXLQVDAXXYKNVXNGFKVSVREEGVRGLAKGWAPTF 430
T P D++K + + Y+ F ++V EG+ L KGW PT+
Sbjct: 316 TISTPADVIKTRIMNNPSGYQGAVECFMLAVHREGLLSLYKGWLPTW 362
>SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31)
Length = 233
Score = 35.5 bits (78), Expect = 0.037
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +2
Query: 302 PLDLLKCXLQVD--AXXYKNVXNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYE 475
P +L+K LQV Y + F +R EGVRGL KG+ + G G C YE
Sbjct: 35 PANLIKIRLQVQRKTTLYNGSLDAFTKVIRTEGVRGLYKGYLVSCAGL-FAGQCYITTYE 93
Query: 476 VXK 484
+ +
Sbjct: 94 LVR 96
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 34.3 bits (75), Expect = 0.085
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +2
Query: 302 PLDLLKCXLQVDAXXYKNVXNGFKVSVR----EEGVRGLAKGWAPTFI 433
P + +KC LQV+A + +G V+ EEGVRG+ +G PT I
Sbjct: 140 PAERIKCILQVEAGASGSTQSGPYAIVKRIYAEEGVRGIFRGLPPTMI 187
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 7/45 (15%)
Frame = +2
Query: 302 PLDLLKCXLQV-------DAXXYKNVXNGFKVSVREEGVRGLAKG 415
PLDLLK LQ + +K + F +VR EG+RGL KG
Sbjct: 40 PLDLLKVRLQAMNQVKPGETAPFKGAMDCFMKTVRLEGLRGLYKG 84
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 34.3 bits (75), Expect = 0.085
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Frame = +2
Query: 290 TAVVPLDLLKCXLQ-----VDA-XXYKNVXNGFKVSVREEGVRGLAKGWAPTFIGYSMQG 451
TAV P+DL+K +Q ++A YKN + F VR EG GL +G P +G S +
Sbjct: 929 TAVYPIDLVKTRMQNQRAVLEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLLGVSPEK 988
Query: 452 LCK 460
K
Sbjct: 989 AIK 991
>SB_25734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1938
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +2
Query: 365 GFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEV 478
GF ++ +EEG L K T YS++GL KF FYEV
Sbjct: 924 GFNITYKEEGGGTLYKTADHTKRSYSIKGLKKFTFYEV 961
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Frame = +2
Query: 296 VVPLDLLKCXLQVDA-----XXYKNVXNGFKVSVREEGVRGLAKGWAPTFIG 436
V P +++K L V YK + + K +REEG+ L KG P+F+G
Sbjct: 170 VYPCEVIKTRLTVQHVNKSNAHYKGMRHALKTILREEGILALYKGVTPSFLG 221
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 33.1 bits (72), Expect = 0.20
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +2
Query: 284 THTAVVPLDLLKCXLQVDAX----XYKNVXNGFKVSVREEGVRGLAKGWAPTFI 433
+ TA PLD+++ +Q+ YK+ + F V+ EG RGL KG P +
Sbjct: 175 SQTATYPLDVVRRRMQMKGIRADFAYKSTLHAFSSIVKLEGFRGLYKGMWPNIL 228
>SB_49185| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = -2
Query: 306 RGTTAVWVRPHDRTPPTPQRAKYLGD--PNSQDSVGTAADAAMPPVCSIATGATVD 145
+G V VRPHD+ P Q+++Y+ D NS + + A P V S +D
Sbjct: 32 QGVRLVAVRPHDQVSPRQQQSQYIHDLLNNSYPIIPKVGEPASPYVSSPRESVLID 87
>SB_16955| Best HMM Match : SLAP (HMM E-Value=0.048)
Length = 1952
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = -2
Query: 306 RGTTAVWVRPHDRTPPTPQRAKYLGD--PNSQDSVGTAADAAMPPVCSIATGATVD 145
+G V VRPHD+ P Q+++Y+ D NS + + A P V S +D
Sbjct: 1613 QGVRLVAVRPHDQVSPRQQQSQYIHDLLNNSYPIIPKVGEPASPYVSSPRESVLID 1668
>SB_19190| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1829
Score = 32.3 bits (70), Expect = 0.34
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = -2
Query: 276 HDRTPPTPQRAKYLGDPNSQDSVGTAADAAMPPVCSIATGATVDWHWAGDSG 121
H P P RA L P + S G+ A+ A PP +ATG + + SG
Sbjct: 811 HSLLHPPPGRASQL--PLQEQSSGSRAEEASPPPALVATGPSASYRLPNASG 860
>SB_39421| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1810
Score = 31.9 bits (69), Expect = 0.45
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 546 WRRLRRRNSSPTLPWSPMEAAKVRIQT 626
W+ R SS T PW PME + R++T
Sbjct: 1210 WQVPMRAGSSTTSPWPPMETMRARVET 1236
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 31.5 bits (68), Expect = 0.60
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +2
Query: 347 YKN-VXNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVXK 484
YK + G REEGVRGL +G P + ++ + G YE K
Sbjct: 55 YKGLIRTGLSRVYREEGVRGLYRGIFPALLRQAIYSSTRLGAYEPIK 101
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Frame = +2
Query: 302 PLDLLKCXLQV----DAXXYKNVXNGFKVSVREEGVRGLAKGWAPT 427
P DL+K Q + YKN+ + F ++EG GL G PT
Sbjct: 134 PTDLVKIRFQAVKIGETIPYKNMFHAFYKIAKKEGFLGLWTGMKPT 179
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 31.1 bits (67), Expect = 0.79
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
Frame = +2
Query: 302 PLDLLKCXLQVDAXXYKNVXN--GFKVSVR----EEGVRGLAKGWAPTFIGYSMQGLCKF 463
PLD+++ L V +++ N G ++R EEG+RGL KG P+ + + +
Sbjct: 48 PLDVVRARLTVQDMSTRSISNYTGIVSALRRIHIEEGIRGLYKGLVPSLVSIAPFLGVQQ 107
Query: 464 GFYEVXKVAYAGMLXDETAYTYRTFVYLAASASAEFIA 577
Y++ K+ ++A+ + +L A A IA
Sbjct: 108 SVYDIMKLRAL-----DSAFAANSGTFLVCGAIAGMIA 140
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 31.1 bits (67), Expect = 0.79
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Frame = +2
Query: 296 VVPLDLLKCXLQVDA-----XXYKNVXNGFKVSVREEGVRGLAKGWAPTFI 433
V P +++K L V YK + + K +REEG+ L KG P+F+
Sbjct: 439 VYPCEVIKTRLTVQHVNKSNAHYKGMRHALKTILREEGILALYKGVTPSFL 489
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Frame = +2
Query: 284 THTAVVPLDLLKCXLQVD----AXXYKNVXNGFKVSVREEGVRGLAKGWAPT 427
T + PLD +KC LQ++ Y + + RE GVRG+ KG + T
Sbjct: 151 TSFVLTPLDRVKCILQIEKAFGGSSYGGPVDCLRRIYREAGVRGVYKGISVT 202
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Frame = +2
Query: 284 THTAVVPLDLLKCXLQV-----DAXXYKNVXNGFKVSVREEGVR-GLAKGWAPTFIGYSM 445
+ T PLD+++ +Q+ D Y N +++G+R GL +G + ++
Sbjct: 186 SQTIAYPLDVVRRRMQLAGAVPDGHKYNTCINTLVNVYKDDGIRRGLYRGLSINYLRVCP 245
Query: 446 QGLCKFGFYEVXK 484
Q FG YEV K
Sbjct: 246 QVAIMFGVYEVTK 258
>SB_25940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 29.1 bits (62), Expect = 3.2
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 142 PVDGRARGYRADRWHGGVCCG 204
P +G+ RG+R GGVCCG
Sbjct: 91 PREGQIRGFRFVHISGGVCCG 111
>SB_24673| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 6/43 (13%)
Frame = +1
Query: 529 PYLRVPGGVC------VGGIHRRHCPGRPWRRLRSVSKPCLXS 639
P R GGVC VG +HR P R R++ S CL S
Sbjct: 504 PTFRKAGGVCTWTPGVVGQLHREKRPVRSLRKMASEDNTCLSS 546
>SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +2
Query: 140 CQSTVAPVAIEQTGGMAASAAVPTES 217
C ST PV +QT A+SA VPT S
Sbjct: 154 CLSTARPVTTQQTKKPASSAFVPTTS 179
>SB_9851| Best HMM Match : Hint (HMM E-Value=1.30321e-43)
Length = 493
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Frame = -2
Query: 273 DRTPPTPQRAKYLGDPNSQDSV--GTAADAAMPPVCSIATGATVDWHWAGDSGPRNGEFR 100
D TP +A DP + S+ + A +C V + W G+S R+ FR
Sbjct: 424 DGTPNVLDKASMFIDPRDEVSIRDNSGRVALQVVICVAKLHVVVHFAWTGESNSRDFHFR 483
Query: 99 A 97
A
Sbjct: 484 A 484
>SB_48488| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 404 LAKGWAPTFIGYSMQGLCKFGFYEVXKV 487
L KGW T ++M G K+G E+ K+
Sbjct: 123 LLKGWGATSFEHAMIGAAKYGHIEIVKL 150
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 347 YKNVXNGFKVSVREEGVRGLAKGWAPT 427
Y V + F+ ++EEG GL KG AP+
Sbjct: 75 YDGVKDCFRTILKEEGAMGLFKGLAPS 101
>SB_10272| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = +1
Query: 85 VARCGAELSVPWPTIARPVPVDGRARGYRADRWHGGVCCGTHGVL 219
+ RCG + W +P P++GR R W G C +L
Sbjct: 338 IRRCGTH-APGWMVGRQPSPIEGRVRRTVCFNWAGNCCKWRQNIL 381
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 27.9 bits (59), Expect = 7.4
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
Frame = +2
Query: 284 THTAVVPLDLLKCXLQ----VDAX-XYKNVXNGFKVSVREEGVRGLAKGWAPTFIGYSMQ 448
T A +P+D+ K +Q +D YK + VR EGV L KG+ P +
Sbjct: 107 TTVASMPVDIAKTRIQNMRIIDGKPEYKGTMDVLARIVRNEGVFALWKGFTPYYFRIGPH 166
Query: 449 GLCKFGFYE 475
+ F F E
Sbjct: 167 TVLTFIFLE 175
>SB_41214| Best HMM Match : Gag_spuma (HMM E-Value=2)
Length = 454
Score = 27.9 bits (59), Expect = 7.4
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 288 WVRPHDRTPPTPQRAKY 238
W+RP+ R PP P+ KY
Sbjct: 212 WLRPNGRKPPNPRPLKY 228
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 27.5 bits (58), Expect = 9.7
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +2
Query: 290 TAVVPLDLLKCXLQVDAXXYKNVXNGFKVSVREEGVRGLAKGW-APTFI 433
TA PLD +K LQ A + +V+ EGVRGL KG AP +
Sbjct: 85 TAGQPLDTIKVRLQ--ASFGAGPLDMLARTVKTEGVRGLYKGMLAPVLV 131
>SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061)
Length = 114
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +2
Query: 290 TAVVPLDLLKCXLQVDAXXYKN--VXNGFKVSVREEGVRGLAK 412
T PL+ LK Q YKN V K ++EG++G K
Sbjct: 71 TTTAPLERLKILFQAQNKHYKNMSVFGALKAIYKKEGLQGYYK 113
>SB_402| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = -2
Query: 228 PNSQDSVGTAADAAMPPVCSIATGATVDWHWAGD-SGPRNGEFRA 97
P Q T A PPV +G+ D W GD S P+ + R+
Sbjct: 398 PQPQKPPATRPSATPPPVTGDESGSDYDEDWGGDWSEPKPTQSRS 442
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,802,656
Number of Sequences: 59808
Number of extensions: 383232
Number of successful extensions: 986
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 984
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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