Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_B15
         (652 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CC49F Cluster: hypothetical protein TTHERM_0013...    36   1.1  
UniRef50_Q4YSM1 Cluster: Putative uncharacterized protein; n=7; ...    35   1.9  
UniRef50_Q232M0 Cluster: Putative uncharacterized protein; n=1; ...    34   3.4  
UniRef50_Q4J6X2 Cluster: Thermopsin; n=1; Sulfolobus acidocaldar...    34   3.4  

>UniRef50_UPI00006CC49F Cluster: hypothetical protein
           TTHERM_00138160; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00138160 - Tetrahymena
           thermophila SB210
          Length = 2654

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
 Frame = -1

Query: 289 HVCNT--VRQIINTIKRGVAINSIPLTPLHSF*RRN*LFYLIYQKWRQVTLINELKF*DD 116
           ++CN   V+Q +NTI+   A++ + + PL+     N LF  I  KW+   +   LK   D
Sbjct: 314 YLCNEKEVKQALNTIRISQAVHQLQVLPLNCQGDINFLFQRITHKWK-ACVATLLKKQMD 372

Query: 115 AMNRMNTRLFK 83
           ++N +N + FK
Sbjct: 373 SLNSINKQNFK 383


>UniRef50_Q4YSM1 Cluster: Putative uncharacterized protein; n=7;
            Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein - Plasmodium berghei
          Length = 2993

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -2

Query: 471  YHSHNLNVDNIYRVNKKANYKQRNFWTSINQIQNYGT 361
            YH    NVD I R+N+  NY  + F T +N ++N  T
Sbjct: 1741 YHDTFNNVDTIKRLNRTENYTNKFFETILNNVENNNT 1777


>UniRef50_Q232M0 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1231

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
 Frame = -2

Query: 453  NVDNIYRVNKKANYKQRNFWTSINQ-IQNYGTETVERATNMTLTFKLRAHIPR-LVGMSV 280
            N   +Y  ++KAN+ + +F  S NQ +Q +  E  E+  N++ T  L+  I + L+G++V
Sbjct: 962  NQFELYTFDQKANFSKFDFKFSHNQMLQKHSVE--EKKLNISQTSTLQYSIKKLLIGLTV 1019

Query: 279  TLCV 268
            T C+
Sbjct: 1020 TFCL 1023


>UniRef50_Q4J6X2 Cluster: Thermopsin; n=1; Sulfolobus
           acidocaldarius|Rep: Thermopsin - Sulfolobus
           acidocaldarius
          Length = 548

 Score = 33.9 bits (74), Expect = 3.4
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -2

Query: 414 YKQRNFWTSINQIQNYGTETVERATNMTL 328
           Y +   W S N+I NYG +T E A N+T+
Sbjct: 252 YLRNGQWLSFNEIYNYGFDTAESANNLTV 280


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,038,639
Number of Sequences: 1657284
Number of extensions: 10035022
Number of successful extensions: 20679
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20674
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)