Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_B13
         (445 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0FDQ8 Cluster: Putative uncharacterized protein; n=1; ...   153   2e-36
UniRef50_Q21IE7 Cluster: Putative cellobiohydrolase, non-reducin...    33   3.7  
UniRef50_A2TW02 Cluster: Putative uncharacterized protein; n=1; ...    33   3.7  
UniRef50_A6VWP4 Cluster: Putative uncharacterized protein; n=1; ...    32   6.4  
UniRef50_Q035E9 Cluster: Possible cell surface protein; n=1; Lac...    31   8.5  
UniRef50_Q233X3 Cluster: Putative uncharacterized protein; n=1; ...    31   8.5  
UniRef50_A2QP60 Cluster: Complex: S. pombe Ctr4 and Ctr5 associa...    31   8.5  

>UniRef50_A0FDQ8 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 272

 Score =  153 bits (370), Expect = 2e-36
 Identities = 84/130 (64%), Positives = 86/130 (66%)
 Frame = +2

Query: 47  FAAVSLVMPVAEEKDXXXXXXXXXXXXKSXDSVKPTEVSXXXXXXXXXXXXVSNDEVPAI 226
           FAAVSL MPVAEEKD            K  DSVKPTEV+            VSNDEVPAI
Sbjct: 10  FAAVSLAMPVAEEKDVVPAQPILEVAPKIDDSVKPTEVAAATEEKKAEPAPVSNDEVPAI 69

Query: 227 PEAKKDDIAPXDSDIAXXXXXXXXXXXXXXXXAKSSEIPDAEAKSADIKVEEPAAQPEDS 406
           PEAKKDDIAP DSDIA                AKSSEIPDAEAKSADIKVEEPAAQPEDS
Sbjct: 70  PEAKKDDIAPEDSDIAKPETVPEVKTEEKVPEAKSSEIPDAEAKSADIKVEEPAAQPEDS 129

Query: 407 KTEVQATVAQ 436
           KTEVQATVA+
Sbjct: 130 KTEVQATVAE 139


>UniRef50_Q21IE7 Cluster: Putative cellobiohydrolase, non-reducing
           end; n=1; Saccharophagus degradans 2-40|Rep: Putative
           cellobiohydrolase, non-reducing end - Saccharophagus
           degradans (strain 2-40 / ATCC 43961 / DSM 17024)
          Length = 791

 Score = 32.7 bits (71), Expect = 3.7
 Identities = 20/93 (21%), Positives = 34/93 (36%)
 Frame = -2

Query: 426 VACTSVFESSG*AAGSSTLISADFASASGISDDFAXXXXXXXXXXXXXXXFAISESXGAI 247
           V C     S   ++GSST  S+  +S+SG S   +                  S S  + 
Sbjct: 282 VTCNGASSSGSSSSGSSTSSSSSSSSSSGSSTSSSSSSSSTGSTSSSSSSSTSSTSSSSS 341

Query: 246 SSFLASGIAGTSSLLTXXXXXXXXXXXADTSVG 148
           SS  ++  + +SS  T           + ++ G
Sbjct: 342 SSTSSTSSSSSSSSSTSSSSSSSSSSSSSSTSG 374


>UniRef50_A2TW02 Cluster: Putative uncharacterized protein; n=1;
           Dokdonia donghaensis MED134|Rep: Putative
           uncharacterized protein - Dokdonia donghaensis MED134
          Length = 374

 Score = 32.7 bits (71), Expect = 3.7
 Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
 Frame = -1

Query: 265 GVXWGYIVLFGLWYSGYLVVTNWSRFGFLLFSGSRYFGRFNRVXTFGRDXXNW-LNGNYV 89
           G  WG    +  WY G      W   GF  +S   Y+G FNR   F     N   NGN V
Sbjct: 152 GFGWGGN-FWSPWYGGAYYNPFWGG-GFAYYSPFYYYGNFNRFNNFNYGYANHRYNGNRV 209

Query: 88  LF 83
            +
Sbjct: 210 AY 211


>UniRef50_A6VWP4 Cluster: Putative uncharacterized protein; n=1;
           Marinomonas sp. MWYL1|Rep: Putative uncharacterized
           protein - Marinomonas sp. MWYL1
          Length = 74

 Score = 31.9 bits (69), Expect = 6.4
 Identities = 11/39 (28%), Positives = 24/39 (61%)
 Frame = -1

Query: 256 WGYIVLFGLWYSGYLVVTNWSRFGFLLFSGSRYFGRFNR 140
           WG+++  G W   +L+++++  +G+   S  RYF + N+
Sbjct: 9   WGWVLWIGFW---FLLISSFGHWGYSYRSNRRYFAQANK 44


>UniRef50_Q035E9 Cluster: Possible cell surface protein; n=1;
           Lactobacillus casei ATCC 334|Rep: Possible cell surface
           protein - Lactobacillus casei (strain ATCC 334)
          Length = 746

 Score = 31.5 bits (68), Expect = 8.5
 Identities = 26/99 (26%), Positives = 37/99 (37%), Gaps = 2/99 (2%)
 Frame = -2

Query: 423 ACTSVFESSG*AAGSSTLISADFASAS--GISDDFAXXXXXXXXXXXXXXXFAISESXGA 250
           A +S   SS  +AGSS   SA  +SAS  G S   +                A S S  +
Sbjct: 604 ASSSAASSSASSAGSSAASSAASSSASSAGSSAASSAASSSASSAGSSAASSAASSSASS 663

Query: 249 ISSFLASGIAGTSSLLTXXXXXXXXXXXADTSVGLTESS 133
             S  AS  A +S+              + +S G + +S
Sbjct: 664 AGSSAASSAASSSASSAGSSAASSAASSSASSAGSSAAS 702


>UniRef50_Q233X3 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 865

 Score = 31.5 bits (68), Expect = 8.5
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +3

Query: 327 NHPRFPMLKQNLLILKWKNQLLSLKIQKLKY 419
           NHPR   +KQ  +I K+ N   SL  +KL+Y
Sbjct: 86  NHPRILKIKQYQMIKKYNNSQYSLCFEKLEY 116


>UniRef50_A2QP60 Cluster: Complex: S. pombe Ctr4 and Ctr5 associate
           in vivo; n=2; Pezizomycotina|Rep: Complex: S. pombe Ctr4
           and Ctr5 associate in vivo - Aspergillus niger
          Length = 168

 Score = 31.5 bits (68), Expect = 8.5
 Identities = 13/35 (37%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
 Frame = -1

Query: 250 YIVLFGLWYSGYLVVTNW--SRFGFLLFSGSRYFG 152
           +++L G++Y+GY++V  +  +  GFLLFS  +  G
Sbjct: 119 FVMLLGMYYNGYIIVCIFVGAFVGFLLFSSGKVVG 153


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 331,584,528
Number of Sequences: 1657284
Number of extensions: 4832918
Number of successful extensions: 14075
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14061
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22761518346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)