Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_B13
         (445 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomy...    27   1.3  
SPBP19A11.04c |mor2|cps12|morphogenesis protein Mor2|Schizosacch...    25   4.0  

>SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 613

 Score = 27.1 bits (57), Expect = 1.3
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 5/44 (11%)
 Frame = -1

Query: 208 VTNWSRFGFLLFSGSRYFGR----FNRVXT-FGRDXXNWLNGNY 92
           V N+  FGF++ + S YF +    FN   T  GR    +L GN+
Sbjct: 323 VINYDNFGFMMGASSTYFNKIMRNFNDSSTKNGRIIQQYLKGNF 366


>SPBP19A11.04c |mor2|cps12|morphogenesis protein
           Mor2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 2196

 Score = 25.4 bits (53), Expect = 4.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 223 SGYLVVTNWSRFGFLLFSGSRY 158
           S Y  + NW  F FL+ S SR+
Sbjct: 180 SSYFSLANWESFAFLVGSMSRF 201


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,388,543
Number of Sequences: 5004
Number of extensions: 20656
Number of successful extensions: 55
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 162176800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)