BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_B13 (445 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_01_0201 - 1347868-1347925,1348040-1348135,1348447-1348523,134... 29 1.7 08_02_1167 + 24847689-24848156 28 2.9 01_06_1519 + 37942389-37943702,37944142-37944266,37944358-379444... 28 3.9 07_01_0513 + 3828196-3828309,3828408-3828722,3828823-3828879,382... 27 9.0 >02_01_0201 - 1347868-1347925,1348040-1348135,1348447-1348523, 1349385-1349453,1349576-1349629,1350295-1350350, 1350487-1350694,1350978-1351066,1351163-1351187 Length = 243 Score = 29.1 bits (62), Expect = 1.7 Identities = 13/33 (39%), Positives = 21/33 (63%) Frame = -2 Query: 423 ACTSVFESSG*AAGSSTLISADFASASGISDDF 325 +CT +F+SS +A + ++A FA AS D+F Sbjct: 64 SCTYIFDSSDASASGAADVAATFAKASRKMDEF 96 >08_02_1167 + 24847689-24848156 Length = 155 Score = 28.3 bits (60), Expect = 2.9 Identities = 16/34 (47%), Positives = 21/34 (61%) Frame = +2 Query: 323 AKSSEIPDAEAKSADIKVEEPAAQPEDSKTEVQA 424 AK E P+AEA++A VEE AA P + E +A Sbjct: 108 AKEPE-PEAEAEAAAAPVEEAAAAPVEVAEEAEA 140 >01_06_1519 + 37942389-37943702,37944142-37944266,37944358-37944499, 37944602-37944848,37946139-37946196,37947629-37947913, 37947988-37948120 Length = 767 Score = 27.9 bits (59), Expect = 3.9 Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 3/37 (8%) Frame = +2 Query: 332 SEIPDAEAKSADIKVEEP---AAQPEDSKTEVQATVA 433 +E P AEA S + K EEP AA E +K E +A A Sbjct: 167 TEEPKAEASSEEAKTEEPKAEAAADEPAKEESKAEAA 203 >07_01_0513 + 3828196-3828309,3828408-3828722,3828823-3828879, 3829668-3829826,3829918-3830028,3830173-3830259, 3830359-3830591,3830808-3830886,3831173-3831316, 3831529-3831568,3831667-3831729,3832193-3832224, 3832320-3832361,3832444-3832557 Length = 529 Score = 26.6 bits (56), Expect = 9.0 Identities = 14/34 (41%), Positives = 23/34 (67%), Gaps = 2/34 (5%) Frame = +2 Query: 350 EAKSADIKVEEPAAQPEDSKTE--VQATVAQXWR 445 E++S DIK + +AQP +K E VQAT++ ++ Sbjct: 394 ESQSEDIKPADSSAQPISAKKEPLVQATLSSMFK 427 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 8,820,101 Number of Sequences: 37544 Number of extensions: 128356 Number of successful extensions: 325 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 321 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 325 length of database: 14,793,348 effective HSP length: 76 effective length of database: 11,940,004 effective search space used: 847740284 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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