BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_B12 (656 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 01_06_1811 - 40055106-40055174,40055291-40055440,40056696-40056782 87 1e-17 01_06_1812 - 40057904-40057972,40058071-40058220,40059449-40059532 86 2e-17 07_03_0990 + 23173868-23174200 48 7e-06 01_06_1364 + 36684937-36685281 48 7e-06 07_03_0989 + 23161020-23161412 47 1e-05 01_05_0651 + 23930455-23930457,23930543-23930636,23930764-239308... 46 3e-05 07_03_0988 + 23160028-23160360 40 0.002 01_04_0034 + 15318509-15319567 31 0.81 03_05_1062 - 30043596-30043811,30044083-30044178,30044387-300444... 28 7.5 >01_06_1811 - 40055106-40055174,40055291-40055440,40056696-40056782 Length = 101 Score = 87.0 bits (206), Expect = 1e-17 Identities = 45/90 (50%), Positives = 54/90 (60%), Gaps = 5/90 (5%) Frame = +1 Query: 127 DEKK-----GENEHINLKVLXQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFXFD 291 DEKK G HINLKV QD V F+IK+ T L+KLMNAYCDR + ++ + F FD Sbjct: 8 DEKKPAGGEGGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDIKSIAFLFD 67 Query: 292 GQPINXNDTPTSLXMEXGDTIXVYQQQTGG 381 G+ +N TP L ME GD I QTGG Sbjct: 68 GRRLNAEQTPDQLEMEDGDEIDAMLHQTGG 97 >01_06_1812 - 40057904-40057972,40058071-40058220,40059449-40059532 Length = 100 Score = 86.2 bits (204), Expect = 2e-17 Identities = 41/82 (50%), Positives = 49/82 (59%) Frame = +1 Query: 136 KGENEHINLKVLXQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFXFDGQPINXND 315 +G HINLKV QD V F+IK+ T L+KLMNAYCDR + M + F FDG+ + Sbjct: 15 EGGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNAIAFLFDGRRLRGEQ 74 Query: 316 TPTSLXMEXGDTIXVYQQQTGG 381 TP L ME GD I QTGG Sbjct: 75 TPDELEMEDGDEIDAMLHQTGG 96 >07_03_0990 + 23173868-23174200 Length = 110 Score = 48.0 bits (109), Expect = 7e-06 Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 2/86 (2%) Frame = +1 Query: 136 KGENEHINLKVLXQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQ--VVRFXFDGQPINX 309 K E++ LKV D V ++ L+ LM+ Y DRA +Q RF +DG+ ++ Sbjct: 25 KRAGEYVTLKVQDTDGRAVYRTMRWTEQLQGLMDFYYDRAHGRVQRGTGRFLYDGRRLSG 84 Query: 310 NDTPTSLXMEXGDTIXVYQQQTGGVS 387 TP L ME GD + +++ GG + Sbjct: 85 WQTPAELDMEDGDEVDFFEELIGGAA 110 >01_06_1364 + 36684937-36685281 Length = 114 Score = 48.0 bits (109), Expect = 7e-06 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 2/95 (2%) Frame = +1 Query: 112 NLKMADEKKGENEH-INLKVLXQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRF-X 285 +LK+ + G I + V Q A V F IK LR++M+ YC + L + V+F Sbjct: 17 DLKLVKAEPGTGPGLITITVTSQTFADVYFAIKPRVKLRRVMDLYCGKHSLDPKTVKFID 76 Query: 286 FDGQPINXNDTPTSLXMEXGDTIXVYQQQTGGVSL 390 DG+ + TP + ++ G TI + Q GG + Sbjct: 77 DDGRFVRSEQTPEEVGLQDGSTISLAIDQQGGACI 111 >07_03_0989 + 23161020-23161412 Length = 130 Score = 47.2 bits (107), Expect = 1e-05 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 2/82 (2%) Frame = +1 Query: 148 EHINLKVLXQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQ--VVRFXFDGQPINXNDTP 321 E++ LKV D V + + L+ LM+ Y DR+ +Q RF FDG+ + TP Sbjct: 37 EYVTLKVQGTDGRAVYRTMLRTEELQGLMDFYYDRSHGRVQRGTGRFLFDGRRLRGWQTP 96 Query: 322 TSLXMEXGDTIXVYQQQTGGVS 387 L ME GD + +++ GG + Sbjct: 97 AELQMEDGDEVNFFEELIGGAA 118 >01_05_0651 + 23930455-23930457,23930543-23930636,23930764-23930849, 23930930-23931108,23932275-23932482,23932808-23932975 Length = 245 Score = 46.0 bits (104), Expect = 3e-05 Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 1/86 (1%) Frame = +1 Query: 106 HINLKMADEKKGENEHINLKVLXQDNA-IVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRF 282 HI+L + E+ E + + V QD A QF++ K KL AY + LS+ + F Sbjct: 157 HIDLDKSPERHEAREKVVVTV--QDKAGHHQFRLYKDEKFGKLFRAYAKKVNLSVADLTF 214 Query: 283 XFDGQPINXNDTPTSLXMEXGDTIXV 360 FDG ++ TP L +E D + V Sbjct: 215 AFDGDKVDAESTPEDLGLEDEDMVEV 240 >07_03_0988 + 23160028-23160360 Length = 110 Score = 39.5 bits (88), Expect = 0.002 Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 1/77 (1%) Frame = +1 Query: 154 INLKVLXQDNAIVQFKIKKHTPLRKLMNAYCDRA-GLSMQVVRFXFDGQPINXNDTPTSL 330 I LKV+ Q++ ++ I+ L+ +M+ Y +A ++ F FDG + + TP L Sbjct: 21 ITLKVMDQEDRRIRHTIRMADKLQVVMDMYYAKAPDVTYGTGTFLFDGIRLKGDMTPMGL 80 Query: 331 XMEXGDTIXVYQQQTGG 381 M GDT+ + GG Sbjct: 81 EMVDGDTVDFFPVMIGG 97 >01_04_0034 + 15318509-15319567 Length = 352 Score = 31.1 bits (67), Expect = 0.81 Identities = 19/77 (24%), Positives = 35/77 (45%), Gaps = 2/77 (2%) Frame = +1 Query: 154 INLKVLXQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSM--QVVRFXFDGQPINXNDTPTS 327 + + +L A + +++ L+ LM+ R SM ++G+ + + TP Sbjct: 276 VTIDLLTMVKAKRTYTLRRTDKLQGLMDLCLSREPASMYRHGCVLIYEGRRVQDSQTPDD 335 Query: 328 LXMEXGDTIXVYQQQTG 378 L +E GDTI +Q G Sbjct: 336 LKLEDGDTIHAIARQVG 352 >03_05_1062 - 30043596-30043811,30044083-30044178,30044387-30044448, 30044990-30045023,30045220-30046173 Length = 453 Score = 27.9 bits (59), Expect = 7.5 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -1 Query: 575 ETHNALRSSAMLLCVTKLLXNTFTDTNDV 489 E H +L+ +AML+C K + TD DV Sbjct: 414 ELHKSLQEAAMLVCEQKQANSPATDNGDV 442 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,330,918 Number of Sequences: 37544 Number of extensions: 234151 Number of successful extensions: 343 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 339 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 340 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1644004708 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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