Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_B12
         (656 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061090-1|AAL28638.1|   90|Drosophila melanogaster LD07775p pro...   163   1e-40
AF218862-1|AAF31702.1|   90|Drosophila melanogaster Smt3 protein.     163   1e-40
AF053083-1|AAD19219.1|   90|Drosophila melanogaster ubiquitin-li...   163   1e-40
AE014134-1209|AAF52470.1|   90|Drosophila melanogaster CG4494-PA...   163   1e-40
AY075378-1|AAL68219.1|  163|Drosophila melanogaster LD08233p pro...    30   3.2  
AE014134-2678|AAF53505.2| 2190|Drosophila melanogaster CG12455-P...    29   7.3  

>AY061090-1|AAL28638.1|   90|Drosophila melanogaster LD07775p
           protein.
          Length = 90

 Score =  163 bits (397), Expect = 1e-40
 Identities = 78/88 (88%), Positives = 80/88 (90%), Gaps = 1/88 (1%)
 Frame = +1

Query: 121 MADEKKG-ENEHINLKVLXQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFXFDGQ 297
           M+DEKKG E EHINLKVL QDNA+VQFKIKKHTPLRKLMNAYCDRAGLSMQVVRF FDGQ
Sbjct: 1   MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 60

Query: 298 PINXNDTPTSLXMEXGDTIXVYQQQTGG 381
           PIN NDTPTSL ME GDTI VYQQQTGG
Sbjct: 61  PINENDTPTSLEMEEGDTIEVYQQQTGG 88


>AF218862-1|AAF31702.1|   90|Drosophila melanogaster Smt3 protein.
          Length = 90

 Score =  163 bits (397), Expect = 1e-40
 Identities = 78/88 (88%), Positives = 80/88 (90%), Gaps = 1/88 (1%)
 Frame = +1

Query: 121 MADEKKG-ENEHINLKVLXQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFXFDGQ 297
           M+DEKKG E EHINLKVL QDNA+VQFKIKKHTPLRKLMNAYCDRAGLSMQVVRF FDGQ
Sbjct: 1   MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 60

Query: 298 PINXNDTPTSLXMEXGDTIXVYQQQTGG 381
           PIN NDTPTSL ME GDTI VYQQQTGG
Sbjct: 61  PINENDTPTSLEMEEGDTIEVYQQQTGG 88


>AF053083-1|AAD19219.1|   90|Drosophila melanogaster ubiquitin-like
           protein SMT3 protein.
          Length = 90

 Score =  163 bits (397), Expect = 1e-40
 Identities = 78/88 (88%), Positives = 80/88 (90%), Gaps = 1/88 (1%)
 Frame = +1

Query: 121 MADEKKG-ENEHINLKVLXQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFXFDGQ 297
           M+DEKKG E EHINLKVL QDNA+VQFKIKKHTPLRKLMNAYCDRAGLSMQVVRF FDGQ
Sbjct: 1   MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 60

Query: 298 PINXNDTPTSLXMEXGDTIXVYQQQTGG 381
           PIN NDTPTSL ME GDTI VYQQQTGG
Sbjct: 61  PINENDTPTSLEMEEGDTIEVYQQQTGG 88


>AE014134-1209|AAF52470.1|   90|Drosophila melanogaster CG4494-PA
           protein.
          Length = 90

 Score =  163 bits (397), Expect = 1e-40
 Identities = 78/88 (88%), Positives = 80/88 (90%), Gaps = 1/88 (1%)
 Frame = +1

Query: 121 MADEKKG-ENEHINLKVLXQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFXFDGQ 297
           M+DEKKG E EHINLKVL QDNA+VQFKIKKHTPLRKLMNAYCDRAGLSMQVVRF FDGQ
Sbjct: 1   MSDEKKGGETEHINLKVLGQDNAVVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFRFDGQ 60

Query: 298 PINXNDTPTSLXMEXGDTIXVYQQQTGG 381
           PIN NDTPTSL ME GDTI VYQQQTGG
Sbjct: 61  PINENDTPTSLEMEEGDTIEVYQQQTGG 88


>AY075378-1|AAL68219.1|  163|Drosophila melanogaster LD08233p
           protein.
          Length = 163

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 13/47 (27%), Positives = 24/47 (51%)
 Frame = -3

Query: 150 FVFSLLFISHFEINVVLETINTKL*IDKLIWYLFSQTNA*MTACAMA 10
           F+ + L   HFE+  VL   +      K++W+L  ++N  + A  +A
Sbjct: 88  FIVAALCFYHFELVFVLRVTSRGSSTSKVLWFLIGESNRTLAALVLA 134


>AE014134-2678|AAF53505.2| 2190|Drosophila melanogaster CG12455-PA,
            isoform A protein.
          Length = 2190

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 19/81 (23%), Positives = 35/81 (43%)
 Frame = -1

Query: 653  KHITMELLKLXTAFWYTYNLPYHKLFETHNALRSSAMLLCVTKLLXNTFTDTNDVSLKLT 474
            KH+   L  L  +     N+       T +   SS  +   T +  +TF+ T  +++  T
Sbjct: 1729 KHLIKILSDLVYSLNDKNNIKSTSQLTTESTFNSSINITNSTTVASSTFSTTESMAIHST 1788

Query: 473  *G*SLRRVHLIDFDPLEMVNP 411
               S R + +  F+ +E +NP
Sbjct: 1789 PYLSTREITVFQFNDVENINP 1809


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,257,849
Number of Sequences: 53049
Number of extensions: 441029
Number of successful extensions: 775
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)