BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_B12 (656 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value X99600-1|CAA67914.1| 91|Caenorhabditis elegans ubiquitin-like ... 85 4e-17 U94830-1|AAB67608.1| 91|Caenorhabditis elegans ubiquitin-like ... 85 4e-17 AF043701-6|AAK18969.1| 91|Caenorhabditis elegans Sumo (ubiquit... 85 4e-17 AF040644-5|AAD34647.1| 1032|Caenorhabditis elegans Hypothetical ... 31 0.54 L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein. 28 6.7 AC025726-18|AAK73910.1| 996|Caenorhabditis elegans Hypothetical... 28 6.7 AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical... 28 6.7 >X99600-1|CAA67914.1| 91|Caenorhabditis elegans ubiquitin-like protein protein. Length = 91 Score = 85.0 bits (201), Expect = 4e-17 Identities = 42/90 (46%), Positives = 61/90 (67%), Gaps = 3/90 (3%) Frame = +1 Query: 121 MADE--KKGEN-EHINLKVLXQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFXFD 291 MAD+ + G+N E+I +KV+ QD+ V F++K T + KL +Y DR G+++ +RF FD Sbjct: 1 MADDAAQAGDNAEYIKIKVVGQDSNEVHFRVKYGTSMAKLKKSYADRTGVAVNSLRFLFD 60 Query: 292 GQPINXNDTPTSLXMEXGDTIXVYQQQTGG 381 G+ IN +DTP +L ME D I VYQ+Q GG Sbjct: 61 GRRINDDDTPKTLEMEDDDVIEVYQEQLGG 90 >U94830-1|AAB67608.1| 91|Caenorhabditis elegans ubiquitin-like protein protein. Length = 91 Score = 85.0 bits (201), Expect = 4e-17 Identities = 42/90 (46%), Positives = 61/90 (67%), Gaps = 3/90 (3%) Frame = +1 Query: 121 MADE--KKGEN-EHINLKVLXQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFXFD 291 MAD+ + G+N E+I +KV+ QD+ V F++K T + KL +Y DR G+++ +RF FD Sbjct: 1 MADDAAQAGDNAEYIKIKVVGQDSNEVHFRVKYGTSMAKLKKSYADRTGVAVNSLRFLFD 60 Query: 292 GQPINXNDTPTSLXMEXGDTIXVYQQQTGG 381 G+ IN +DTP +L ME D I VYQ+Q GG Sbjct: 61 GRRINDDDTPKTLEMEDDDVIEVYQEQLGG 90 >AF043701-6|AAK18969.1| 91|Caenorhabditis elegans Sumo (ubiquitin-related) homologprotein 1 protein. Length = 91 Score = 85.0 bits (201), Expect = 4e-17 Identities = 42/90 (46%), Positives = 61/90 (67%), Gaps = 3/90 (3%) Frame = +1 Query: 121 MADE--KKGEN-EHINLKVLXQDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFXFD 291 MAD+ + G+N E+I +KV+ QD+ V F++K T + KL +Y DR G+++ +RF FD Sbjct: 1 MADDAAQAGDNAEYIKIKVVGQDSNEVHFRVKYGTSMAKLKKSYADRTGVAVNSLRFLFD 60 Query: 292 GQPINXNDTPTSLXMEXGDTIXVYQQQTGG 381 G+ IN +DTP +L ME D I VYQ+Q GG Sbjct: 61 GRRINDDDTPKTLEMEDDDVIEVYQEQLGG 90 >AF040644-5|AAD34647.1| 1032|Caenorhabditis elegans Hypothetical protein H04J21.1 protein. Length = 1032 Score = 31.5 bits (68), Expect = 0.54 Identities = 13/54 (24%), Positives = 30/54 (55%) Frame = +1 Query: 175 QDNAIVQFKIKKHTPLRKLMNAYCDRAGLSMQVVRFXFDGQPINXNDTPTSLXM 336 Q ++ ++++ L +L ++ G+ + +R ++G+PI+ DTP SL + Sbjct: 930 QQLEVLHSHVEENEKLGRLDKRISEKIGVDAKFIRVTYNGRPIDPMDTPYSLGL 983 >L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein. Length = 2553 Score = 27.9 bits (59), Expect = 6.7 Identities = 14/53 (26%), Positives = 27/53 (50%) Frame = +1 Query: 106 HINLKMADEKKGENEHINLKVLXQDNAIVQFKIKKHTPLRKLMNAYCDRAGLS 264 H ++ DE + + + LKV D A+ + + P+ +LM C++ G+S Sbjct: 71 HYLVRNKDEIEYKRKIRLLKVRMLDGAVKTISVDESQPVSQLMMTVCNKIGIS 123 >AC025726-18|AAK73910.1| 996|Caenorhabditis elegans Hypothetical protein Y71G12B.11b protein. Length = 996 Score = 27.9 bits (59), Expect = 6.7 Identities = 14/53 (26%), Positives = 27/53 (50%) Frame = +1 Query: 106 HINLKMADEKKGENEHINLKVLXQDNAIVQFKIKKHTPLRKLMNAYCDRAGLS 264 H ++ DE + + + LKV D A+ + + P+ +LM C++ G+S Sbjct: 71 HYLVRNKDEIEYKRKIRLLKVRMLDGAVKTISVDESQPVSQLMMTVCNKIGIS 123 >AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical protein Y71G12B.11a protein. Length = 2553 Score = 27.9 bits (59), Expect = 6.7 Identities = 14/53 (26%), Positives = 27/53 (50%) Frame = +1 Query: 106 HINLKMADEKKGENEHINLKVLXQDNAIVQFKIKKHTPLRKLMNAYCDRAGLS 264 H ++ DE + + + LKV D A+ + + P+ +LM C++ G+S Sbjct: 71 HYLVRNKDEIEYKRKIRLLKVRMLDGAVKTISVDESQPVSQLMMTVCNKIGIS 123 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,282,295 Number of Sequences: 27780 Number of extensions: 240397 Number of successful extensions: 502 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 499 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 502 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1465835342 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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