BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_B10 (407 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 08_01_0195 + 1612938-1613003,1613026-1613161,1614624-1614725,161... 118 2e-27 02_01_0089 + 633642-633644,633728-633863,635356-635457,635565-63... 118 2e-27 02_05_1204 + 34936696-34936698,34936809-34936944,34937794-349378... 117 3e-27 09_04_0019 - 13833358-13833526,13834207-13834390,13834977-13835292 27 4.3 11_06_0288 - 21962546-21962977,21963041-21963211,21963411-21963788 27 5.7 10_08_0324 + 16747117-16747330,16747432-16747559,16747675-167477... 27 7.6 04_04_0761 + 27841337-27841479,27842220-27842223,27842265-27843371 27 7.6 >08_01_0195 + 1612938-1613003,1613026-1613161,1614624-1614725, 1614833-1614876 Length = 115 Score = 118 bits (283), Expect = 2e-27 Identities = 50/91 (54%), Positives = 64/91 (70%) Frame = +2 Query: 35 SDKMTKGTSSFGKRRNKTHTLCRRCGXSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXX 214 S + KGT SFGKRRNKTHTLC RCG S+H+QKS C+ CGYPAA++R Y+WSVKA Sbjct: 19 SSNVGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSTCSSCGYPAARIRKYNWSVKAIRRK 78 Query: 215 XXXXXXMRHLKIVRRRFRNGFKEGKPTPPKK 307 MR+++ V RRF++ F+EG P+K Sbjct: 79 TTGTGRMRYMRHVPRRFKSNFREGTEATPRK 109 >02_01_0089 + 633642-633644,633728-633863,635356-635457,635565-635608 Length = 94 Score = 118 bits (283), Expect = 2e-27 Identities = 50/88 (56%), Positives = 63/88 (71%) Frame = +2 Query: 44 MTKGTSSFGKRRNKTHTLCRRCGXSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 223 M KGT SFGKRRNKTHTLC RCG S+H+QKS C+ CGYPAA++R Y+WSVKA Sbjct: 1 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSTCSSCGYPAARIRKYNWSVKAIRRKTTG 60 Query: 224 XXXMRHLKIVRRRFRNGFKEGKPTPPKK 307 MR+++ V RRF++ F+EG P+K Sbjct: 61 TGRMRYMRHVPRRFKSNFREGTEATPRK 88 >02_05_1204 + 34936696-34936698,34936809-34936944,34937794-34937895, 34938153-34938199 Length = 95 Score = 117 bits (282), Expect = 3e-27 Identities = 50/88 (56%), Positives = 63/88 (71%) Frame = +2 Query: 44 MTKGTSSFGKRRNKTHTLCRRCGXSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 223 M KGT SFGKRRNKTHTLC RCG S+H+QKS C+ CGYPAA++R Y+WSVKA Sbjct: 1 MGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSTCSSCGYPAARIRKYNWSVKAIRRKTTG 60 Query: 224 XXXMRHLKIVRRRFRNGFKEGKPTPPKK 307 MR+L+ V +RF++ F+EG P+K Sbjct: 61 TGRMRYLRHVPKRFKSNFREGTEAAPRK 88 >09_04_0019 - 13833358-13833526,13834207-13834390,13834977-13835292 Length = 222 Score = 27.5 bits (58), Expect = 4.3 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +2 Query: 56 TSSFGKRRNKTHTLCRRCGXSSYHIQKS 139 T +FG K HT CR CG +S++ +S Sbjct: 26 TYTFGTHTAK-HTFCRVCGITSFYTPRS 52 >11_06_0288 - 21962546-21962977,21963041-21963211,21963411-21963788 Length = 326 Score = 27.1 bits (57), Expect = 5.7 Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 2/34 (5%) Frame = +1 Query: 157 ISCSKITILPLVSEG*AQEDYWNW--PHASFEDC 252 I+ +T + +S + +D W W PH +EDC Sbjct: 116 IALPPVTTIEQLSIARSGDDKWTWLPPHKDYEDC 149 >10_08_0324 + 16747117-16747330,16747432-16747559,16747675-16747744, 16747832-16747988,16748089-16748701,16749132-16749653, 16749686-16750279,16750359-16750709,16750808-16751395 Length = 1078 Score = 26.6 bits (56), Expect = 7.6 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 4/39 (10%) Frame = +2 Query: 68 GKRRNKTHTLCRRCGXSSYHIQKSK----CAQCGYPAAK 172 G+ + K T CR CG + K CA+CG+P K Sbjct: 9 GEHKGKEKT-CRVCGEEVAAREDGKPFVACAECGFPVCK 46 >04_04_0761 + 27841337-27841479,27842220-27842223,27842265-27843371 Length = 417 Score = 26.6 bits (56), Expect = 7.6 Identities = 12/34 (35%), Positives = 15/34 (44%) Frame = +2 Query: 26 LSTSDKMTKGTSSFGKRRNKTHTLCRRCGXSSYH 127 L D+M S FG H L R+C S+ H Sbjct: 62 LGVRDEMIFSVSLFGSSHQSIHKLYRKCWSSNSH 95 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 9,436,679 Number of Sequences: 37544 Number of extensions: 173493 Number of successful extensions: 383 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 376 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 383 length of database: 14,793,348 effective HSP length: 75 effective length of database: 11,977,548 effective search space used: 718652880 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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