Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_B10
(407 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-2108|AAF48428.1| 93|Drosophila melanogaster CG9091-PA... 154 5e-38
AE013599-3544|AAF46957.1| 89|Drosophila melanogaster CG9873-PA... 129 2e-30
BT023213-1|AAY55629.1| 89|Drosophila melanogaster IP02962p pro... 125 3e-29
BT023224-1|AAY55640.1| 103|Drosophila melanogaster IP02862p pro... 75 4e-14
BT023192-1|AAY55608.1| 78|Drosophila melanogaster IP03162p pro... 60 8e-10
AE014296-2144|AAF49916.1| 733|Drosophila melanogaster CG10663-P... 29 1.8
X98881-1|CAA67384.1| 865|Drosophila melanogaster nuclear hormon... 27 9.5
X73045-1|CAA51523.1| 113|Drosophila melanogaster DR-78 protein. 27 9.5
U01087-1|AAA19975.1| 864|Drosophila melanogaster nuclear hormon... 27 9.5
AF238308-1|AAF69494.1| 866|Drosophila melanogaster nuclear rece... 27 9.5
AE014296-3498|AAF51692.2| 862|Drosophila melanogaster CG18023-P... 27 9.5
>AE014298-2108|AAF48428.1| 93|Drosophila melanogaster CG9091-PA
protein.
Length = 93
Score = 154 bits (373), Expect = 5e-38
Identities = 70/92 (76%), Positives = 74/92 (80%)
Frame = +2
Query: 44 MTKGTSSFGKRRNKTHTLCRRCGXSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 223
MTKGTSSFGKR NKTHTLCRRCG SSYHIQKS CAQCGYPAAKLRSY+WSVKA
Sbjct: 1 MTKGTSSFGKRHNKTHTLCRRCGRSSYHIQKSTCAQCGYPAAKLRSYNWSVKAKRRKTTG 60
Query: 224 XXXMRHLKIVRRRFRNGFKEGKPTPPKKAVXS 319
M+HLK+VRRRFRNGF+EG PKKAV S
Sbjct: 61 TGRMQHLKVVRRRFRNGFREGTQAKPKKAVAS 92
>AE013599-3544|AAF46957.1| 89|Drosophila melanogaster CG9873-PA
protein.
Length = 89
Score = 129 bits (311), Expect = 2e-30
Identities = 56/81 (69%), Positives = 65/81 (80%)
Frame = +2
Query: 44 MTKGTSSFGKRRNKTHTLCRRCGXSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 223
MTKGT+SFGKR NKTHT+CRRCG SSYH+QKSKC+QCGYPAAK RS++WS KA
Sbjct: 1 MTKGTTSFGKRHNKTHTICRRCGNSSYHLQKSKCSQCGYPAAKTRSFNWSRKAKGRKAQG 60
Query: 224 XXXMRHLKIVRRRFRNGFKEG 286
MR+LK +RRRFRNG +EG
Sbjct: 61 TGRMRYLKNLRRRFRNGLREG 81
>BT023213-1|AAY55629.1| 89|Drosophila melanogaster IP02962p
protein.
Length = 89
Score = 125 bits (301), Expect = 3e-29
Identities = 55/81 (67%), Positives = 64/81 (79%)
Frame = +2
Query: 44 MTKGTSSFGKRRNKTHTLCRRCGXSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 223
MTKGT+SFGKR NKTHT+CRRCG SSYH+QKSKC+Q GYPAAK RS++WS KA
Sbjct: 1 MTKGTTSFGKRHNKTHTICRRCGNSSYHLQKSKCSQSGYPAAKTRSFNWSRKAKGRKAQG 60
Query: 224 XXXMRHLKIVRRRFRNGFKEG 286
MR+LK +RRRFRNG +EG
Sbjct: 61 TGRMRYLKNLRRRFRNGLREG 81
>BT023224-1|AAY55640.1| 103|Drosophila melanogaster IP02862p
protein.
Length = 103
Score = 74.9 bits (176), Expect = 4e-14
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = +2
Query: 44 MTKGTSSFGKRRNKTHTLCRRCGXSSYHIQKSKCAQ 151
MTKGT+SFGKR NKTHT+CRRCG SSYH+QKSKC+Q
Sbjct: 1 MTKGTTSFGKRHNKTHTICRRCGNSSYHLQKSKCSQ 36
>BT023192-1|AAY55608.1| 78|Drosophila melanogaster IP03162p
protein.
Length = 78
Score = 60.5 bits (140), Expect = 8e-10
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +2
Query: 44 MTKGTSSFGKRRNKTHTLCRRCGXSSYH 127
MTKGT+SFGKR NKTHT+CRRCG SSYH
Sbjct: 1 MTKGTTSFGKRHNKTHTICRRCGNSSYH 28
>AE014296-2144|AAF49916.1| 733|Drosophila melanogaster CG10663-PA
protein.
Length = 733
Score = 29.5 bits (63), Expect = 1.8
Identities = 12/36 (33%), Positives = 24/36 (66%)
Frame = +2
Query: 71 KRRNKTHTLCRRCGXSSYHIQKSKCAQCGYPAAKLR 178
+RR + + R+CG + H+++SKC+ C +PA ++
Sbjct: 64 RRRERFCKVKRKCGHTK-HVEQSKCSHC-HPAPAIK 97
>X98881-1|CAA67384.1| 865|Drosophila melanogaster nuclear hormone
receptor protein.
Length = 865
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +2
Query: 17 SFGLSTSDKMTKGTSSFGKRRNKTHTLCRRCG--XSSYHIQKSKCAQC 154
SFGL+ S +++ +K+ C+ CG S YH + C C
Sbjct: 340 SFGLADSSSSNGSSNNNNGVSSKSFVPCKVCGDKASGYHYGVTSCEGC 387
>X73045-1|CAA51523.1| 113|Drosophila melanogaster DR-78 protein.
Length = 113
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +2
Query: 17 SFGLSTSDKMTKGTSSFGKRRNKTHTLCRRCG--XSSYHIQKSKCAQC 154
SFGL+ S +++ +K+ C+ CG S YH + C C
Sbjct: 20 SFGLADSSSSNGSSNNNNGVSSKSFVPCKVCGDKASGYHYGVTSCEGC 67
>U01087-1|AAA19975.1| 864|Drosophila melanogaster nuclear hormone
receptor superfamilyprotein protein.
Length = 864
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +2
Query: 17 SFGLSTSDKMTKGTSSFGKRRNKTHTLCRRCG--XSSYHIQKSKCAQC 154
SFGL+ S +++ +K+ C+ CG S YH + C C
Sbjct: 340 SFGLADSSSSNGSSNNNNGVSSKSFVPCKVCGDKASGYHYGVTSCEGC 387
>AF238308-1|AAF69494.1| 866|Drosophila melanogaster nuclear
receptor E78A protein.
Length = 866
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +2
Query: 17 SFGLSTSDKMTKGTSSFGKRRNKTHTLCRRCG--XSSYHIQKSKCAQC 154
SFGL+ S +++ +K+ C+ CG S YH + C C
Sbjct: 340 SFGLADSSSSNGSSNNNNGVSSKSFVPCKVCGDKASGYHYGVTSCEGC 387
>AE014296-3498|AAF51692.2| 862|Drosophila melanogaster CG18023-PA,
isoform A protein.
Length = 862
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +2
Query: 17 SFGLSTSDKMTKGTSSFGKRRNKTHTLCRRCG--XSSYHIQKSKCAQC 154
SFGL+ S +++ +K+ C+ CG S YH + C C
Sbjct: 336 SFGLADSSSSNGSSNNNNGVSSKSFVPCKVCGDKASGYHYGVTSCEGC 383
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,478,185
Number of Sequences: 53049
Number of extensions: 283276
Number of successful extensions: 951
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 947
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 951
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1188481122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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