Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_B10
         (407 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical pr...   112   1e-25
Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical pr...   105   9e-24
AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical ...    30   0.74 
U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical pr...    29   0.98 

>Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical
           protein W01D2.1 protein.
          Length = 92

 Score =  112 bits (269), Expect = 1e-25
 Identities = 47/87 (54%), Positives = 59/87 (67%)
 Frame = +2

Query: 44  MTKGTSSFGKRRNKTHTLCRRCGXSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 223
           MTKGT +FGK+  K+HTLC+RCG SS+HIQK +CA CGYP AK R+Y+W  K+       
Sbjct: 1   MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYPDAKKRTYNWGAKSIRRRTTG 60

Query: 224 XXXMRHLKIVRRRFRNGFKEGKPTPPK 304
               RHL+ V  RFRNGF+EG    P+
Sbjct: 61  TGRTRHLRDVNARFRNGFREGTTPKPR 87


>Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical
           protein C54C6.1 protein.
          Length = 91

 Score =  105 bits (253), Expect = 9e-24
 Identities = 45/85 (52%), Positives = 56/85 (65%)
 Frame = +2

Query: 44  MTKGTSSFGKRRNKTHTLCRRCGXSSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXX 223
           MTKGT +FGK+  K+HTLC+RCG SS+HIQK +CA CGY  AK R+Y+W  K+       
Sbjct: 1   MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTG 60

Query: 224 XXXMRHLKIVRRRFRNGFKEGKPTP 298
               RHL+ V  RFRNGF+   P P
Sbjct: 61  TGRTRHLRDVNARFRNGFRGTTPKP 85


>AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical
           protein C36C9.4 protein.
          Length = 671

 Score = 29.9 bits (64), Expect = 0.74
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +2

Query: 62  SFGKRRNKTHTLCRRCGXSSYHIQKSKCAQCGYPAA 169
           ++ K    TH  C +CG  + +    KC  CG P A
Sbjct: 93  TYNKNNFSTHHFCNKCGKVAQN--SKKCKHCGGPVA 126


>U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical
           protein T25D1.2 protein.
          Length = 438

 Score = 29.5 bits (63), Expect = 0.98
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +2

Query: 62  SFGKRRNKTHTLCRRCGXSSYHIQKSKCAQCGYPAA 169
           ++ K    TH  C +CG  + +    KC  CG P A
Sbjct: 165 TYNKNNFSTHHFCNKCGKVAQN--SKKCKYCGGPVA 198


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,943,970
Number of Sequences: 27780
Number of extensions: 147614
Number of successful extensions: 314
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 314
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 651753158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)