BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_B10 (407 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase ... 22 2.3 AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase ... 22 2.3 DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 21 5.4 DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 21 7.1 >AF213012-1|AAG43568.1| 492|Apis mellifera acetylcholinesterase protein. Length = 492 Score = 22.2 bits (45), Expect = 2.3 Identities = 9/21 (42%), Positives = 13/21 (61%) Frame = +3 Query: 3 VFFISLSDCQRVTR*RRVPQA 65 +FF+ LS C R +R VP + Sbjct: 8 LFFLLLSSCTRPSRGNAVPSS 28 >AB181702-1|BAE06051.1| 628|Apis mellifera acetylcholinesterase protein. Length = 628 Score = 22.2 bits (45), Expect = 2.3 Identities = 9/21 (42%), Positives = 13/21 (61%) Frame = +3 Query: 3 VFFISLSDCQRVTR*RRVPQA 65 +FF+ LS C R +R VP + Sbjct: 8 LFFLLLSSCTRPSRGNAVPSS 28 >DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monooxygenase protein. Length = 548 Score = 21.0 bits (42), Expect = 5.4 Identities = 9/22 (40%), Positives = 15/22 (68%), Gaps = 1/22 (4%) Frame = +1 Query: 97 MQKMWXIV-ISHSKIKMRPMWI 159 + KM I+ + H+KI +RP W+ Sbjct: 213 VMKMCDILHLRHTKIWLRPDWL 234 >DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated ion channel subunit protein. Length = 469 Score = 20.6 bits (41), Expect = 7.1 Identities = 9/36 (25%), Positives = 17/36 (47%) Frame = -1 Query: 176 VILLQDIHIGRILIFECDMTXYHIFCITYGSYFGAY 69 +IL ++H+ + E + IF T Y+G + Sbjct: 179 IILADELHLTEYKLVEKWVNSSEIFYTTSQQYYGHF 214 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 97,188 Number of Sequences: 438 Number of extensions: 1948 Number of successful extensions: 4 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4 length of database: 146,343 effective HSP length: 52 effective length of database: 123,567 effective search space used: 10256061 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.2 bits)
- SilkBase 1999-2023 -