Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_B07
         (621 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    23   2.1  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     23   2.7  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    22   3.6  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    22   3.6  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   3.6  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    22   3.6  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   4.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   4.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   4.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.3  

>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 217 GTRREEHHLLRNRP 176
           G R+  HHL++N+P
Sbjct: 82  GVRKVLHHLIKNKP 95


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = +2

Query: 224 SWEGPAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 346
           SW G   +   VG+    S++  +   K+ +    YP E+G
Sbjct: 36  SWPGRPPKRAPVGLSLAASHLQQQQLKKQRLDNGDYPYENG 76


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 217 GTRREEHHLLRNRP 176
           G R+  HHL+ N+P
Sbjct: 82  GVRKVIHHLIENKP 95


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 217 GTRREEHHLLRNRP 176
           G R+  HHL+ N+P
Sbjct: 82  GVRKVIHHLIENKP 95


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 250 GPDGGAFPRSRGTRREEHHLLRNRPCT 170
           GP G  F  ++  R+E      + PCT
Sbjct: 668 GPSGDCFYENKFYRQEAQWTSSDNPCT 694


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 316 PDPQIPHRTRNRH 354
           PD  +P RT NRH
Sbjct: 110 PDNFLPERTANRH 122


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 541 RXWMPTYMAGVLNV 500
           R WMP+ MA +L++
Sbjct: 618 RRWMPSTMANILDL 631


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 541 RXWMPTYMAGVLNV 500
           R WMP+ MA +L++
Sbjct: 851 RRWMPSTMANILDL 864


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 541 RXWMPTYMAGVLNV 500
           R WMP+ MA +L++
Sbjct: 851 RRWMPSTMANILDL 864


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 385 MPNLLHVIPVSDDSVFD 335
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 385 MPNLLHVIPVSDDSVFD 335
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 385 MPNLLHVIPVSDDSVFD 335
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 385 MPNLLHVIPVSDDSVFD 335
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,747
Number of Sequences: 336
Number of extensions: 3432
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)