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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_B07
         (621 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||...   136   2e-33
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb...    71   2e-13
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s...    60   3e-10
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce...    54   2e-08
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe...    36   0.005
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc...    36   0.006
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy...    34   0.019
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca...    27   1.7  
SPBC1683.09c |frp1||ferric-chelate reductase Frp1|Schizosaccharo...    27   2.9  
SPBC725.05c |||nucleotide pyrophosphatase |Schizosaccharomyces p...    23   3.1  
SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces p...    26   3.8  
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa...    26   5.1  
SPAC1834.06c |pmo25||mo25 family protein Pmo25|Schizosaccharomyc...    25   6.7  
SPBC8D2.18c |||adenosylhomocysteinase |Schizosaccharomyces pombe...    25   6.7  
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo...    25   6.7  

>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 375

 Score =  136 bits (329), Expect = 2e-33
 Identities = 59/65 (90%), Positives = 60/65 (92%)
 Frame = +2

Query: 236 PAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415
           P    +MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVA
Sbjct: 38  PRHHGIMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVA 97

Query: 416 PEEHP 430
           PEEHP
Sbjct: 98  PEEHP 102



 Score = 78.2 bits (184), Expect = 9e-16
 Identities = 33/40 (82%), Positives = 37/40 (92%)
 Frame = +1

Query: 130 KKLPRLVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 249
           +++  LV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH G
Sbjct: 3   EEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHG 42



 Score = 66.5 bits (155), Expect = 3e-12
 Identities = 30/40 (75%), Positives = 32/40 (80%)
 Frame = +3

Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQ 536
           P     LLTEAPLNPK+NREKMTQI+FETFN PA YV IQ
Sbjct: 98  PEEHPCLLTEAPLNPKSNREKMTQIIFETFNAPAFYVAIQ 137



 Score = 41.5 bits (93), Expect = 1e-04
 Identities = 20/26 (76%), Positives = 22/26 (84%)
 Frame = +1

Query: 529 ASKXVLSLYAXGRTTGIVLDSXDGVS 606
           A + VLSLYA GRTTGIVLDS DGV+
Sbjct: 135 AIQAVLSLYASGRTTGIVLDSGDGVT 160


>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 379

 Score = 70.5 bits (165), Expect = 2e-13
 Identities = 31/61 (50%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
 Frame = +2

Query: 251 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEH 427
           VM    QKD +VG EAQ+ RG+L ++ PIE GI+ NW DME+IW + + + +L   PEEH
Sbjct: 47  VMPSSIQKDMFVGSEAQNLRGLLKIQRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEH 106

Query: 428 P 430
           P
Sbjct: 107 P 107



 Score = 52.4 bits (120), Expect = 5e-08
 Identities = 20/34 (58%), Positives = 27/34 (79%)
 Frame = +1

Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 246
           + +DNGSG  KAGFAGDD P+ +FP+ VGR +H+
Sbjct: 12  ICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHE 45



 Score = 36.7 bits (81), Expect = 0.003
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +3

Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQ 536
           P    +LLTE PL    N+EK+ +  +ET N PA+   +Q
Sbjct: 103 PEEHPLLLTEPPLANIRNKEKIAEYFYETLNVPALSFSLQ 142



 Score = 33.5 bits (73), Expect = 0.025
 Identities = 15/31 (48%), Positives = 22/31 (70%)
 Frame = +1

Query: 514 PPCTSASKXVLSLYAXGRTTGIVLDSXDGVS 606
           P  + + + VL+LYA  RTTGIVL+  DG++
Sbjct: 135 PALSFSLQPVLALYASARTTGIVLECGDGLT 165


>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
           subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 390

 Score = 59.7 bits (138), Expect = 3e-10
 Identities = 21/49 (42%), Positives = 39/49 (79%)
 Frame = +2

Query: 272 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 418
           KD  VGDEA++ R +L +KYP+E+GI+ ++++M ++W +TF+ +L++ P
Sbjct: 50  KDVMVGDEAEAVRSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDP 98



 Score = 51.2 bits (117), Expect = 1e-07
 Identities = 22/40 (55%), Positives = 28/40 (70%)
 Frame = +3

Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQ 536
           PR  ++LLTE P+NP ANREKM + MFE +    +YV IQ
Sbjct: 98  PRGRKILLTEPPMNPVANREKMCETMFERYGFGGVYVAIQ 137



 Score = 45.6 bits (103), Expect = 6e-06
 Identities = 19/31 (61%), Positives = 24/31 (77%)
 Frame = +1

Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 237
           +V+DNG+G  K G+A D+ PR  FPSIVGRP
Sbjct: 6   IVLDNGTGFVKVGYAKDNFPRFQFPSIVGRP 36



 Score = 33.9 bits (74), Expect = 0.019
 Identities = 15/26 (57%), Positives = 21/26 (80%)
 Frame = +1

Query: 529 ASKXVLSLYAXGRTTGIVLDSXDGVS 606
           A + VLSLYA G ++G+V+DS DGV+
Sbjct: 135 AIQAVLSLYAQGLSSGVVVDSGDGVT 160


>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 427

 Score = 53.6 bits (123), Expect = 2e-08
 Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
 Frame = +2

Query: 275 DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 427
           D ++G++A  K     +L YPI HG + NWD ME+ W  + +  LR  PE+H
Sbjct: 73  DFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDH 124



 Score = 48.8 bits (111), Expect = 6e-07
 Identities = 20/40 (50%), Positives = 26/40 (65%)
 Frame = +3

Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQ 536
           P +   LLTE PLNP  NRE   +IMFE+FN   +Y+ +Q
Sbjct: 121 PEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQ 160



 Score = 40.7 bits (91), Expect = 2e-04
 Identities = 14/28 (50%), Positives = 23/28 (82%)
 Frame = +1

Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIV 228
           +++DNG+G  K G+AG+DAP  VFP+++
Sbjct: 8   IIMDNGTGYSKLGYAGNDAPSYVFPTVI 35


>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 721

 Score = 35.9 bits (79), Expect = 0.005
 Identities = 15/32 (46%), Positives = 22/32 (68%)
 Frame = +1

Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 240
           LV+DNGS   +AG+ G+  P+ VF ++V R R
Sbjct: 27  LVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYR 58



 Score = 33.5 bits (73), Expect = 0.025
 Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
 Frame = +2

Query: 263 MGQKDSYVGDEAQSKRGILTL-KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 430
           + +  + VG++   + G  ++ + P E  +++NWD ME++  +TF  +L +   EHP
Sbjct: 62  LSRTSTLVGNDTLIEVGSRSIARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHP 117



 Score = 32.7 bits (71), Expect = 0.044
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +3

Query: 432 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVGI 533
           + +TE   NP   R  MT+++FE +N P++  GI
Sbjct: 118 ICMTEPLANPTYVRSTMTELLFELYNAPSVAYGI 151


>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
           Arp42|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 430

 Score = 35.5 bits (78), Expect = 0.006
 Identities = 13/34 (38%), Positives = 23/34 (67%)
 Frame = +1

Query: 130 KKLPRLVVDNGSGMCKAGFAGDDAPRAVFPSIVG 231
           +++P LV+D GS   + G+AG+++P  + PS  G
Sbjct: 8   EEIPSLVIDPGSCWTRFGYAGEESPMTILPSYYG 41



 Score = 30.3 bits (65), Expect = 0.23
 Identities = 13/45 (28%), Positives = 25/45 (55%)
 Frame = +3

Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQXRALA 551
           P    +++TE   NP++ R+++ +  FE  + PA Y+  Q   +A
Sbjct: 99  PTEYAMMITEPSWNPQSVRQQIMEAAFEQLHVPAFYLTKQAVCVA 143



 Score = 28.7 bits (61), Expect = 0.72
 Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
 Frame = +2

Query: 236 PAIRAVMVGMGQKDSYVGDEAQSKRGI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 409
           P+   V   +  ++ YV DE Q    I  + +K    +GI+ +W+     W      +L+
Sbjct: 37  PSYYGVRSDVTGRNKYVVDELQIHAPIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQ 96

Query: 410 VAPEEH 427
           V P E+
Sbjct: 97  VNPTEY 102


>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 433

 Score = 33.9 bits (74), Expect = 0.019
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +1

Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVG 231
           +V+D GS   + GF+G+D P+ V PS  G
Sbjct: 14  IVIDPGSKWTRIGFSGEDIPKCVLPSYCG 42



 Score = 33.5 bits (73), Expect = 0.025
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +2

Query: 317 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 430
           + +K  I +G V NWD    +W +    +L+  P EHP
Sbjct: 63  MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHP 100



 Score = 33.5 bits (73), Expect = 0.025
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +3

Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQXRALA 551
           P    +L+TE   NP  NR K  + MFE+   PA Y+  Q    A
Sbjct: 96  PLEHPILITEPFDNPPENRVKTLETMFESLRCPATYLAKQETCAA 140


>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
            synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 2410

 Score = 27.5 bits (58), Expect = 1.7
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -3

Query: 550  ARARXWMPTYMAGVLNVSNMIWVIFSLLALGLRGASVSRTWVF 422
            A  R W+    A +  +++    IF  L  G  GA  +R WVF
Sbjct: 2069 APGRVWITNVAAWIYAIASASGSIFFSLNFGEEGAVQTRIWVF 2111


>SPBC1683.09c |frp1||ferric-chelate reductase
           Frp1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 564

 Score = 26.6 bits (56), Expect = 2.9
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 248 AVMVGMGQKDSYVGDEAQSKRGILTLKYPI 337
           A+M+G     +Y+G  AQ KR +LT +  I
Sbjct: 164 AIMIGAIHGFAYIGLAAQGKRALLTARVTI 193


>SPBC725.05c |||nucleotide pyrophosphatase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 485

 Score = 23.0 bits (47), Expect(2) = 3.1
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = +2

Query: 353 TNWDDMEKIWHHTFYNELRVAPEEHPG 433
           T WD  E IW +   N +R A    PG
Sbjct: 162 TWWDKGEPIWVNAERNNVRSAVHMWPG 188



 Score = 21.8 bits (44), Expect(2) = 3.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 314 ILTLKYPIEHGIVTN 358
           I+T  YP  HGIV+N
Sbjct: 125 IVTGLYPESHGIVSN 139


>SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 226

 Score = 26.2 bits (55), Expect = 3.8
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = +3

Query: 435 LLTEAPLNPKANREKMTQIMFETFN 509
           +L  APL+ +   +KM +++FET+N
Sbjct: 181 VLETAPLHAEEVSKKMKELLFETYN 205


>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
           Arp9|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 523

 Score = 25.8 bits (54), Expect = 5.1
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +2

Query: 332 PIEHGIVTNWDDMEKIWHHTF 394
           PI+ G V +W+ ++  W H +
Sbjct: 113 PIQRGRVVDWEALKAFWKHLY 133


>SPAC1834.06c |pmo25||mo25 family protein Pmo25|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 329

 Score = 25.4 bits (53), Expect = 6.7
 Identities = 14/54 (25%), Positives = 29/54 (53%)
 Frame = +3

Query: 420 RNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQXRALAVRVRSYHRYR 581
           R +  LL E  LN +ANR  MT+ +    N   M + ++ ++  ++  ++H ++
Sbjct: 223 RQSLKLLGEILLN-RANRSVMTRYISSAENLKLMMILLRDKSKNIQFEAFHVFK 275


>SPBC8D2.18c |||adenosylhomocysteinase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 433

 Score = 25.4 bits (53), Expect = 6.7
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -1

Query: 606 GNTVAGVQHDTGGTTXRVQREHGLGCRRTWRAC*MFRT 493
           G  +AG  H T  T   ++    LG   TW +C ++ T
Sbjct: 46  GARIAGCLHMTIQTAVLIETLVALGAEVTWSSCNIYST 83


>SPAC17C9.03 |tif471||translation initiation factor eIF4G
            |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1403

 Score = 25.4 bits (53), Expect = 6.7
 Identities = 19/65 (29%), Positives = 26/65 (40%)
 Frame = +1

Query: 130  KKLPRLVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGRDGRYGTEGLLCRR*GTEQK 309
            K + RL +D G     AGF      ++     V    H G  G +       RR G E+ 
Sbjct: 899  KGISRLGIDRGFSSSGAGFGSGSNYKSAPSRGVSHHGHGGMSGSHRGSQRGSRRGGGERD 958

Query: 310  RYPDP 324
            + PDP
Sbjct: 959  K-PDP 962


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,632,961
Number of Sequences: 5004
Number of extensions: 54687
Number of successful extensions: 155
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 155
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 273658928
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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