BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_B07 (621 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 136 2e-33 SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 71 2e-13 SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 60 3e-10 SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 54 2e-08 SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 36 0.005 SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 36 0.006 SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 34 0.019 SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 27 1.7 SPBC1683.09c |frp1||ferric-chelate reductase Frp1|Schizosaccharo... 27 2.9 SPBC725.05c |||nucleotide pyrophosphatase |Schizosaccharomyces p... 23 3.1 SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces p... 26 3.8 SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 26 5.1 SPAC1834.06c |pmo25||mo25 family protein Pmo25|Schizosaccharomyc... 25 6.7 SPBC8D2.18c |||adenosylhomocysteinase |Schizosaccharomyces pombe... 25 6.7 SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 25 6.7 >SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2|||Manual Length = 375 Score = 136 bits (329), Expect = 2e-33 Identities = 59/65 (90%), Positives = 60/65 (92%) Frame = +2 Query: 236 PAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415 P +MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVA Sbjct: 38 PRHHGIMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVA 97 Query: 416 PEEHP 430 PEEHP Sbjct: 98 PEEHP 102 Score = 78.2 bits (184), Expect = 9e-16 Identities = 33/40 (82%), Positives = 37/40 (92%) Frame = +1 Query: 130 KKLPRLVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 249 +++ LV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH G Sbjct: 3 EEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHG 42 Score = 66.5 bits (155), Expect = 3e-12 Identities = 30/40 (75%), Positives = 32/40 (80%) Frame = +3 Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQ 536 P LLTEAPLNPK+NREKMTQI+FETFN PA YV IQ Sbjct: 98 PEEHPCLLTEAPLNPKSNREKMTQIIFETFNAPAFYVAIQ 137 Score = 41.5 bits (93), Expect = 1e-04 Identities = 20/26 (76%), Positives = 22/26 (84%) Frame = +1 Query: 529 ASKXVLSLYAXGRTTGIVLDSXDGVS 606 A + VLSLYA GRTTGIVLDS DGV+ Sbjct: 135 AIQAVLSLYASGRTTGIVLDSGDGVT 160 >SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 379 Score = 70.5 bits (165), Expect = 2e-13 Identities = 31/61 (50%), Positives = 42/61 (68%), Gaps = 1/61 (1%) Frame = +2 Query: 251 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEH 427 VM QKD +VG EAQ+ RG+L ++ PIE GI+ NW DME+IW + + + +L PEEH Sbjct: 47 VMPSSIQKDMFVGSEAQNLRGLLKIQRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEH 106 Query: 428 P 430 P Sbjct: 107 P 107 Score = 52.4 bits (120), Expect = 5e-08 Identities = 20/34 (58%), Positives = 27/34 (79%) Frame = +1 Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 246 + +DNGSG KAGFAGDD P+ +FP+ VGR +H+ Sbjct: 12 ICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHE 45 Score = 36.7 bits (81), Expect = 0.003 Identities = 16/40 (40%), Positives = 23/40 (57%) Frame = +3 Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQ 536 P +LLTE PL N+EK+ + +ET N PA+ +Q Sbjct: 103 PEEHPLLLTEPPLANIRNKEKIAEYFYETLNVPALSFSLQ 142 Score = 33.5 bits (73), Expect = 0.025 Identities = 15/31 (48%), Positives = 22/31 (70%) Frame = +1 Query: 514 PPCTSASKXVLSLYAXGRTTGIVLDSXDGVS 606 P + + + VL+LYA RTTGIVL+ DG++ Sbjct: 135 PALSFSLQPVLALYASARTTGIVLECGDGLT 165 >SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual Length = 390 Score = 59.7 bits (138), Expect = 3e-10 Identities = 21/49 (42%), Positives = 39/49 (79%) Frame = +2 Query: 272 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 418 KD VGDEA++ R +L +KYP+E+GI+ ++++M ++W +TF+ +L++ P Sbjct: 50 KDVMVGDEAEAVRSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDP 98 Score = 51.2 bits (117), Expect = 1e-07 Identities = 22/40 (55%), Positives = 28/40 (70%) Frame = +3 Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQ 536 PR ++LLTE P+NP ANREKM + MFE + +YV IQ Sbjct: 98 PRGRKILLTEPPMNPVANREKMCETMFERYGFGGVYVAIQ 137 Score = 45.6 bits (103), Expect = 6e-06 Identities = 19/31 (61%), Positives = 24/31 (77%) Frame = +1 Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 237 +V+DNG+G K G+A D+ PR FPSIVGRP Sbjct: 6 IVLDNGTGFVKVGYAKDNFPRFQFPSIVGRP 36 Score = 33.9 bits (74), Expect = 0.019 Identities = 15/26 (57%), Positives = 21/26 (80%) Frame = +1 Query: 529 ASKXVLSLYAXGRTTGIVLDSXDGVS 606 A + VLSLYA G ++G+V+DS DGV+ Sbjct: 135 AIQAVLSLYAQGLSSGVVVDSGDGVT 160 >SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces pombe|chr 1|||Manual Length = 427 Score = 53.6 bits (123), Expect = 2e-08 Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 1/52 (1%) Frame = +2 Query: 275 DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 427 D ++G++A K +L YPI HG + NWD ME+ W + + LR PE+H Sbjct: 73 DFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDH 124 Score = 48.8 bits (111), Expect = 6e-07 Identities = 20/40 (50%), Positives = 26/40 (65%) Frame = +3 Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQ 536 P + LLTE PLNP NRE +IMFE+FN +Y+ +Q Sbjct: 121 PEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQ 160 Score = 40.7 bits (91), Expect = 2e-04 Identities = 14/28 (50%), Positives = 23/28 (82%) Frame = +1 Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIV 228 +++DNG+G K G+AG+DAP VFP+++ Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPTVI 35 >SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe|chr 2|||Manual Length = 721 Score = 35.9 bits (79), Expect = 0.005 Identities = 15/32 (46%), Positives = 22/32 (68%) Frame = +1 Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 240 LV+DNGS +AG+ G+ P+ VF ++V R R Sbjct: 27 LVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYR 58 Score = 33.5 bits (73), Expect = 0.025 Identities = 16/57 (28%), Positives = 33/57 (57%), Gaps = 1/57 (1%) Frame = +2 Query: 263 MGQKDSYVGDEAQSKRGILTL-KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 430 + + + VG++ + G ++ + P E +++NWD ME++ +TF +L + EHP Sbjct: 62 LSRTSTLVGNDTLIEVGSRSIARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHP 117 Score = 32.7 bits (71), Expect = 0.044 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = +3 Query: 432 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVGI 533 + +TE NP R MT+++FE +N P++ GI Sbjct: 118 ICMTEPLANPTYVRSTMTELLFELYNAPSVAYGI 151 >SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Schizosaccharomyces pombe|chr 1|||Manual Length = 430 Score = 35.5 bits (78), Expect = 0.006 Identities = 13/34 (38%), Positives = 23/34 (67%) Frame = +1 Query: 130 KKLPRLVVDNGSGMCKAGFAGDDAPRAVFPSIVG 231 +++P LV+D GS + G+AG+++P + PS G Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPSYYG 41 Score = 30.3 bits (65), Expect = 0.23 Identities = 13/45 (28%), Positives = 25/45 (55%) Frame = +3 Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQXRALA 551 P +++TE NP++ R+++ + FE + PA Y+ Q +A Sbjct: 99 PTEYAMMITEPSWNPQSVRQQIMEAAFEQLHVPAFYLTKQAVCVA 143 Score = 28.7 bits (61), Expect = 0.72 Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 2/66 (3%) Frame = +2 Query: 236 PAIRAVMVGMGQKDSYVGDEAQSKRGI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 409 P+ V + ++ YV DE Q I + +K +GI+ +W+ W +L+ Sbjct: 37 PSYYGVRSDVTGRNKYVVDELQIHAPIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQ 96 Query: 410 VAPEEH 427 V P E+ Sbjct: 97 VNPTEY 102 >SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces pombe|chr 2|||Manual Length = 433 Score = 33.9 bits (74), Expect = 0.019 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = +1 Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVG 231 +V+D GS + GF+G+D P+ V PS G Sbjct: 14 IVIDPGSKWTRIGFSGEDIPKCVLPSYCG 42 Score = 33.5 bits (73), Expect = 0.025 Identities = 13/38 (34%), Positives = 20/38 (52%) Frame = +2 Query: 317 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 430 + +K I +G V NWD +W + +L+ P EHP Sbjct: 63 MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHP 100 Score = 33.5 bits (73), Expect = 0.025 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = +3 Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQXRALA 551 P +L+TE NP NR K + MFE+ PA Y+ Q A Sbjct: 96 PLEHPILITEPFDNPPENRVKTLETMFESLRCPATYLAKQETCAA 140 >SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual Length = 2410 Score = 27.5 bits (58), Expect = 1.7 Identities = 14/43 (32%), Positives = 20/43 (46%) Frame = -3 Query: 550 ARARXWMPTYMAGVLNVSNMIWVIFSLLALGLRGASVSRTWVF 422 A R W+ A + +++ IF L G GA +R WVF Sbjct: 2069 APGRVWITNVAAWIYAIASASGSIFFSLNFGEEGAVQTRIWVF 2111 >SPBC1683.09c |frp1||ferric-chelate reductase Frp1|Schizosaccharomyces pombe|chr 2|||Manual Length = 564 Score = 26.6 bits (56), Expect = 2.9 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +2 Query: 248 AVMVGMGQKDSYVGDEAQSKRGILTLKYPI 337 A+M+G +Y+G AQ KR +LT + I Sbjct: 164 AIMIGAIHGFAYIGLAAQGKRALLTARVTI 193 >SPBC725.05c |||nucleotide pyrophosphatase |Schizosaccharomyces pombe|chr 2|||Manual Length = 485 Score = 23.0 bits (47), Expect(2) = 3.1 Identities = 11/27 (40%), Positives = 13/27 (48%) Frame = +2 Query: 353 TNWDDMEKIWHHTFYNELRVAPEEHPG 433 T WD E IW + N +R A PG Sbjct: 162 TWWDKGEPIWVNAERNNVRSAVHMWPG 188 Score = 21.8 bits (44), Expect(2) = 3.1 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = +2 Query: 314 ILTLKYPIEHGIVTN 358 I+T YP HGIV+N Sbjct: 125 IVTGLYPESHGIVSN 139 >SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces pombe|chr 2|||Manual Length = 226 Score = 26.2 bits (55), Expect = 3.8 Identities = 10/25 (40%), Positives = 18/25 (72%) Frame = +3 Query: 435 LLTEAPLNPKANREKMTQIMFETFN 509 +L APL+ + +KM +++FET+N Sbjct: 181 VLETAPLHAEEVSKKMKELLFETYN 205 >SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosaccharomyces pombe|chr 1|||Manual Length = 523 Score = 25.8 bits (54), Expect = 5.1 Identities = 7/21 (33%), Positives = 13/21 (61%) Frame = +2 Query: 332 PIEHGIVTNWDDMEKIWHHTF 394 PI+ G V +W+ ++ W H + Sbjct: 113 PIQRGRVVDWEALKAFWKHLY 133 >SPAC1834.06c |pmo25||mo25 family protein Pmo25|Schizosaccharomyces pombe|chr 1|||Manual Length = 329 Score = 25.4 bits (53), Expect = 6.7 Identities = 14/54 (25%), Positives = 29/54 (53%) Frame = +3 Query: 420 RNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQXRALAVRVRSYHRYR 581 R + LL E LN +ANR MT+ + N M + ++ ++ ++ ++H ++ Sbjct: 223 RQSLKLLGEILLN-RANRSVMTRYISSAENLKLMMILLRDKSKNIQFEAFHVFK 275 >SPBC8D2.18c |||adenosylhomocysteinase |Schizosaccharomyces pombe|chr 2|||Manual Length = 433 Score = 25.4 bits (53), Expect = 6.7 Identities = 12/38 (31%), Positives = 18/38 (47%) Frame = -1 Query: 606 GNTVAGVQHDTGGTTXRVQREHGLGCRRTWRAC*MFRT 493 G +AG H T T ++ LG TW +C ++ T Sbjct: 46 GARIAGCLHMTIQTAVLIETLVALGAEVTWSSCNIYST 83 >SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizosaccharomyces pombe|chr 1|||Manual Length = 1403 Score = 25.4 bits (53), Expect = 6.7 Identities = 19/65 (29%), Positives = 26/65 (40%) Frame = +1 Query: 130 KKLPRLVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGRDGRYGTEGLLCRR*GTEQK 309 K + RL +D G AGF ++ V H G G + RR G E+ Sbjct: 899 KGISRLGIDRGFSSSGAGFGSGSNYKSAPSRGVSHHGHGGMSGSHRGSQRGSRRGGGERD 958 Query: 310 RYPDP 324 + PDP Sbjct: 959 K-PDP 962 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,632,961 Number of Sequences: 5004 Number of extensions: 54687 Number of successful extensions: 155 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 125 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 155 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 273658928 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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