Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_B07
(621 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 139 2e-33
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 139 2e-33
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 139 2e-33
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 139 2e-33
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 139 2e-33
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 139 2e-33
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 139 2e-33
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 139 2e-33
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 139 2e-33
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 138 2e-33
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 136 2e-32
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 97 9e-21
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 97 9e-21
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 97 9e-21
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 91 4e-19
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 79 3e-15
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 60 1e-09
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 57 9e-09
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 42 3e-04
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 35 0.041
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 35 0.041
U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protei... 29 2.7
U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protei... 29 2.7
Z83232-3|CAE46672.1| 381|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z83232-2|CAB05754.2| 420|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 28 4.7
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 28 4.7
AF125960-3|AAD14737.1| 446|Caenorhabditis elegans Hypothetical ... 28 4.7
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 6.2
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 28 6.2
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 27 8.2
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 139 bits (336), Expect = 2e-33
Identities = 61/65 (93%), Positives = 62/65 (95%)
Frame = +2
Query: 236 PAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 416 PEEHP 430
PEEHP
Sbjct: 99 PEEHP 103
Score = 79.8 bits (188), Expect = 1e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +1
Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 249
LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 75.4 bits (177), Expect = 3e-14
Identities = 35/40 (87%), Positives = 35/40 (87%)
Frame = +3
Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQ 536
P VLLTEAPLNPKANREKMTQIMFETFNTPAMYV IQ
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Score = 41.5 bits (93), Expect = 5e-04
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = +1
Query: 514 PPCTSASKXVLSLYAXGRTTGIVLDSXDGVS 606
P A + VLSLYA GRTTG+VLDS DGV+
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 161
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 139 bits (336), Expect = 2e-33
Identities = 61/65 (93%), Positives = 62/65 (95%)
Frame = +2
Query: 236 PAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 416 PEEHP 430
PEEHP
Sbjct: 99 PEEHP 103
Score = 79.8 bits (188), Expect = 1e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +1
Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 249
LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 75.4 bits (177), Expect = 3e-14
Identities = 35/40 (87%), Positives = 35/40 (87%)
Frame = +3
Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQ 536
P VLLTEAPLNPKANREKMTQIMFETFNTPAMYV IQ
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = +1
Query: 514 PPCTSASKXVLSLYAXGRTTGIVLDSXDGVS 606
P A + VLSLYA GRTTGIVLDS DGV+
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVT 161
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 139 bits (336), Expect = 2e-33
Identities = 61/65 (93%), Positives = 62/65 (95%)
Frame = +2
Query: 236 PAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 416 PEEHP 430
PEEHP
Sbjct: 99 PEEHP 103
Score = 79.8 bits (188), Expect = 1e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +1
Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 249
LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 75.4 bits (177), Expect = 3e-14
Identities = 35/40 (87%), Positives = 35/40 (87%)
Frame = +3
Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQ 536
P VLLTEAPLNPKANREKMTQIMFETFNTPAMYV IQ
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Score = 41.5 bits (93), Expect = 5e-04
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = +1
Query: 514 PPCTSASKXVLSLYAXGRTTGIVLDSXDGVS 606
P A + VLSLYA GRTTG+VLDS DGV+
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 161
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 139 bits (336), Expect = 2e-33
Identities = 61/65 (93%), Positives = 62/65 (95%)
Frame = +2
Query: 236 PAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 416 PEEHP 430
PEEHP
Sbjct: 99 PEEHP 103
Score = 79.8 bits (188), Expect = 1e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +1
Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 249
LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 75.4 bits (177), Expect = 3e-14
Identities = 35/40 (87%), Positives = 35/40 (87%)
Frame = +3
Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQ 536
P VLLTEAPLNPKANREKMTQIMFETFNTPAMYV IQ
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Score = 41.5 bits (93), Expect = 5e-04
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = +1
Query: 514 PPCTSASKXVLSLYAXGRTTGIVLDSXDGVS 606
P A + VLSLYA GRTTG+VLDS DGV+
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 161
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 139 bits (336), Expect = 2e-33
Identities = 61/65 (93%), Positives = 62/65 (95%)
Frame = +2
Query: 236 PAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 416 PEEHP 430
PEEHP
Sbjct: 99 PEEHP 103
Score = 79.8 bits (188), Expect = 1e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +1
Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 249
LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 75.4 bits (177), Expect = 3e-14
Identities = 35/40 (87%), Positives = 35/40 (87%)
Frame = +3
Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQ 536
P VLLTEAPLNPKANREKMTQIMFETFNTPAMYV IQ
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Score = 41.5 bits (93), Expect = 5e-04
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = +1
Query: 514 PPCTSASKXVLSLYAXGRTTGIVLDSXDGVS 606
P A + VLSLYA GRTTG+VLDS DGV+
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 161
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 139 bits (336), Expect = 2e-33
Identities = 61/65 (93%), Positives = 62/65 (95%)
Frame = +2
Query: 236 PAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 416 PEEHP 430
PEEHP
Sbjct: 99 PEEHP 103
Score = 78.2 bits (184), Expect = 4e-15
Identities = 33/35 (94%), Positives = 35/35 (100%)
Frame = +1
Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 249
L++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 9 LILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 75.4 bits (177), Expect = 3e-14
Identities = 35/40 (87%), Positives = 35/40 (87%)
Frame = +3
Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQ 536
P VLLTEAPLNPKANREKMTQIMFETFNTPAMYV IQ
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = +1
Query: 514 PPCTSASKXVLSLYAXGRTTGIVLDSXDGVS 606
P A + VLSLYA GRTTGIVLDS DGV+
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVT 161
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 139 bits (336), Expect = 2e-33
Identities = 61/65 (93%), Positives = 62/65 (95%)
Frame = +2
Query: 236 PAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 416 PEEHP 430
PEEHP
Sbjct: 99 PEEHP 103
Score = 79.8 bits (188), Expect = 1e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +1
Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 249
LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 75.4 bits (177), Expect = 3e-14
Identities = 35/40 (87%), Positives = 35/40 (87%)
Frame = +3
Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQ 536
P VLLTEAPLNPKANREKMTQIMFETFNTPAMYV IQ
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Score = 41.5 bits (93), Expect = 5e-04
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = +1
Query: 514 PPCTSASKXVLSLYAXGRTTGIVLDSXDGVS 606
P A + VLSLYA GRTTG+VLDS DGV+
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 161
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 139 bits (336), Expect = 2e-33
Identities = 61/65 (93%), Positives = 62/65 (95%)
Frame = +2
Query: 236 PAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 25 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 84
Query: 416 PEEHP 430
PEEHP
Sbjct: 85 PEEHP 89
Score = 75.4 bits (177), Expect = 3e-14
Identities = 35/40 (87%), Positives = 35/40 (87%)
Frame = +3
Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQ 536
P VLLTEAPLNPKANREKMTQIMFETFNTPAMYV IQ
Sbjct: 85 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Score = 56.8 bits (131), Expect = 1e-08
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +1
Query: 175 KAGFAGDDAPRAVFPSIVGRPRHQG 249
+AGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQG 29
Score = 41.5 bits (93), Expect = 5e-04
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = +1
Query: 514 PPCTSASKXVLSLYAXGRTTGIVLDSXDGVS 606
P A + VLSLYA GRTTG+VLDS DGV+
Sbjct: 117 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 147
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 139 bits (336), Expect = 2e-33
Identities = 61/65 (93%), Positives = 62/65 (95%)
Frame = +2
Query: 236 PAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 416 PEEHP 430
PEEHP
Sbjct: 99 PEEHP 103
Score = 79.8 bits (188), Expect = 1e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +1
Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 249
LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 75.4 bits (177), Expect = 3e-14
Identities = 35/40 (87%), Positives = 35/40 (87%)
Frame = +3
Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQ 536
P VLLTEAPLNPKANREKMTQIMFETFNTPAMYV IQ
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 138
Score = 41.5 bits (93), Expect = 5e-04
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = +1
Query: 514 PPCTSASKXVLSLYAXGRTTGIVLDSXDGVS 606
P A + VLSLYA GRTTG+VLDS DGV+
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 161
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 138 bits (335), Expect = 2e-33
Identities = 60/65 (92%), Positives = 62/65 (95%)
Frame = +2
Query: 236 PAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+A
Sbjct: 38 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIA 97
Query: 416 PEEHP 430
PEEHP
Sbjct: 98 PEEHP 102
Score = 80.6 bits (190), Expect = 8e-16
Identities = 35/40 (87%), Positives = 38/40 (95%)
Frame = +1
Query: 130 KKLPRLVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 249
+++ LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 3 EEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
Score = 74.1 bits (174), Expect = 7e-14
Identities = 34/40 (85%), Positives = 35/40 (87%)
Frame = +3
Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQ 536
P VLLTEAPLNPK+NREKMTQIMFETFNTPAMYV IQ
Sbjct: 98 PEEHPVLLTEAPLNPKSNREKMTQIMFETFNTPAMYVNIQ 137
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +1
Query: 541 VLSLYAXGRTTGIVLDSXDGVS 606
VLSLYA GRTTGIVLD+ DGV+
Sbjct: 139 VLSLYASGRTTGIVLDTGDGVT 160
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 136 bits (328), Expect = 2e-32
Identities = 59/59 (100%), Positives = 59/59 (100%)
Frame = +2
Query: 254 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 430
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 59
Score = 75.4 bits (177), Expect = 3e-14
Identities = 35/40 (87%), Positives = 35/40 (87%)
Frame = +3
Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQ 536
P VLLTEAPLNPKANREKMTQIMFETFNTPAMYV IQ
Sbjct: 55 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 94
Score = 41.5 bits (93), Expect = 5e-04
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = +1
Query: 514 PPCTSASKXVLSLYAXGRTTGIVLDSXDGVS 606
P A + VLSLYA GRTTG+VLDS DGV+
Sbjct: 87 PAMYVAIQAVLSLYASGRTTGVVLDSGDGVT 117
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 97.1 bits (231), Expect = 9e-21
Identities = 44/48 (91%), Positives = 45/48 (93%)
Frame = +2
Query: 236 PAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 379
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 79.8 bits (188), Expect = 1e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +1
Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 249
LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 97.1 bits (231), Expect = 9e-21
Identities = 44/48 (91%), Positives = 45/48 (93%)
Frame = +2
Query: 236 PAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 379
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 79.8 bits (188), Expect = 1e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +1
Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 249
LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 97.1 bits (231), Expect = 9e-21
Identities = 44/48 (91%), Positives = 45/48 (93%)
Frame = +2
Query: 236 PAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 379
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 79.8 bits (188), Expect = 1e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +1
Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 249
LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 91.5 bits (217), Expect = 4e-19
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = +2
Query: 236 PAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 370
P + VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
Score = 79.8 bits (188), Expect = 1e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +1
Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 249
LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 9 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 78.6 bits (185), Expect = 3e-15
Identities = 32/66 (48%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = +2
Query: 236 PAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRV 412
P VM G D ++G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++
Sbjct: 41 PKYHRVMAGGLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKI 100
Query: 413 APEEHP 430
PEEHP
Sbjct: 101 FPEEHP 106
Score = 54.8 bits (126), Expect = 5e-08
Identities = 23/40 (57%), Positives = 29/40 (72%)
Frame = +3
Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQ 536
P VLLT+APLNP NRE+ +I FETFN PA+Y+ +Q
Sbjct: 102 PEEHPVLLTDAPLNPLKNRERSAEIFFETFNVPALYIQMQ 141
Score = 46.8 bits (106), Expect = 1e-05
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = +1
Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 243
+V+DNGSG+ KAGFAG+ P+ F + VGRP++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKY 43
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +1
Query: 541 VLSLYAXGRTTGIVLDSXDGVS 606
VLSLYA GRTTG+VLDS DGV+
Sbjct: 143 VLSLYATGRTTGVVLDSGDGVT 164
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 60.1 bits (139), Expect = 1e-09
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +2
Query: 251 VMVGMGQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 427
V G+ D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H
Sbjct: 56 VGAGIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDH 115
Score = 47.6 bits (108), Expect = 7e-06
Identities = 20/40 (50%), Positives = 26/40 (65%)
Frame = +3
Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQ 536
P + LLTE PLN NRE +IMFE+FN P +Y+ +Q
Sbjct: 112 PEDHFFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQ 151
Score = 37.9 bits (84), Expect = 0.006
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 133 KLPRLVVDNGSGMCKAGFAGDDAPRAVFPSIV 228
+LP V+DNG+G K G+AG+ P+ + PS +
Sbjct: 5 QLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 57.2 bits (132), Expect = 9e-09
Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +2
Query: 272 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEE 424
KD VG+E R +L + YP+++GIV NWDDM +W HTF E L + P+E
Sbjct: 53 KDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKE 104
Score = 52.0 bits (119), Expect = 3e-07
Identities = 21/40 (52%), Positives = 30/40 (75%)
Frame = +3
Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQ 536
P+ ++LLTE PLNP +NREKM Q+MFE + ++YV +Q
Sbjct: 102 PKECKLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQ 141
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +1
Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 237
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
Score = 35.1 bits (77), Expect = 0.041
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = +1
Query: 529 ASKXVLSLYAXGRTTGIVLDSXDGVSTRC 615
A + VL+LYA G TG+V+DS DGV+ C
Sbjct: 139 AVQAVLTLYAQGLLTGVVVDSGDGVTHIC 167
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/39 (48%), Positives = 25/39 (64%)
Frame = +3
Query: 411 SPPRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYV 527
S P VL +E+ N +A REK+T+IMFE F PA Y+
Sbjct: 119 SNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVPAYYL 157
Score = 32.7 bits (71), Expect = 0.22
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 335 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 430
++ G++ +W+ EKI H++ N L P EHP
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHP 125
Score = 28.7 bits (61), Expect = 3.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIV 228
LV D GS + GFAG++ P+ PS +
Sbjct: 14 LVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 35.1 bits (77), Expect = 0.041
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 269 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTF 394
+K +V E + +L Y PIE G V NWD ++IW TF
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 35.1 bits (77), Expect = 0.041
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +2
Query: 269 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTF 394
+K +V E + +L Y PIE G V NWD ++IW TF
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF 82
>U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protein
58 protein.
Length = 305
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = +1
Query: 172 CKAGFAGDDAPRAV--FPSIVGRPRHQGRDGRYGTEG 276
C AG G PR P I G P G GR+GT G
Sbjct: 161 CPAGPMGPPGPRGPPGVPGITGAPGLDGIPGRHGTPG 197
>U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protein
111 protein.
Length = 332
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = +1
Query: 187 AGDDAPRAVFPSIVGRPRHQGRDGRYGTEGLLCR 288
AG PR P VG P QGRDG G G + R
Sbjct: 147 AGPPGPRGA-PGSVGEPGPQGRDGMGGRPGNMGR 179
>Z83232-3|CAE46672.1| 381|Caenorhabditis elegans Hypothetical
protein K04B12.2b protein.
Length = 381
Score = 28.3 bits (60), Expect = 4.7
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +3
Query: 354 LTGMTWRRFG-IIPSTMSCVSPPRNTQVLLTEAPL-NPKANREKMTQIMFETF-NTPAM 521
+T + W+R I P + PP + ++ EA +P ANRE + Q+M E F TPA+
Sbjct: 252 ITPIKWQRVTPIFPENTKNIQPP-DERIEEDEAEEEDPLANREIVEQLMHEYFIPTPAL 309
>Z83232-2|CAB05754.2| 420|Caenorhabditis elegans Hypothetical
protein K04B12.2a protein.
Length = 420
Score = 28.3 bits (60), Expect = 4.7
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +3
Query: 354 LTGMTWRRFG-IIPSTMSCVSPPRNTQVLLTEAPL-NPKANREKMTQIMFETF-NTPAM 521
+T + W+R I P + PP + ++ EA +P ANRE + Q+M E F TPA+
Sbjct: 291 ITPIKWQRVTPIFPENTKNIQPP-DERIEEDEAEEEDPLANREIVEQLMHEYFIPTPAL 348
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = +2
Query: 329 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHPGPAH*GSPQPQGQQREDDPDHVRNI 505
+P E+ IV++ WD + +W E +AP +HP + G + + R
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHPNISQFGDEDSCDELFQPVKKQCRRQ 511
Query: 506 QHARHVRRHPXPCS 547
+ R HP S
Sbjct: 512 RKTMSSRGHPCSSS 525
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = +2
Query: 329 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHPGPAH*GSPQPQGQQREDDPDHVRNI 505
+P E+ IV++ WD + +W E +AP +HP + G + + R
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHPNISQFGDEDSCDELFQPVKKQCRRQ 552
Query: 506 QHARHVRRHPXPCS 547
+ R HP S
Sbjct: 553 RKTMSSRGHPCSSS 566
>AF125960-3|AAD14737.1| 446|Caenorhabditis elegans Hypothetical
protein T12B3.1 protein.
Length = 446
Score = 28.3 bits (60), Expect = 4.7
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 347 IVTNWDDMEKIWHHTFYNELRVAPEEHPGPAH 442
++ NWD EK W TF+ L+ E P P H
Sbjct: 382 VLQNWDQTEKDWSPTFWFLLKCI-REMPIPLH 412
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 6.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 175 KAGFAGDDAPRAVFPSIVGRPRHQG 249
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 175 KAGFAGDDAPRAVFPSIVGRPRHQGRDGRYGTEG 276
++G AG P+ P G+P H G DG GT G
Sbjct: 224 RSGGAGTPGPQGP-PGPSGQPGHSGNDGVPGTPG 256
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of
efl-1 mutant phenotypeprotein 1 protein.
Length = 4177
Score = 27.5 bits (58), Expect = 8.2
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -3
Query: 361 PVSDDSVFDGVFEGQDTSFALCLISYIRVLLSHTDHH 251
PVS DSV F +D CL+S +R+L++ D H
Sbjct: 232 PVSSDSVPSQQFSKEDL---YCLLSRVRMLVTFEDWH 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,194,733
Number of Sequences: 27780
Number of extensions: 342963
Number of successful extensions: 1288
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1283
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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