BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_B07 (621 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 24 1.4 DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 21 7.3 AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C prot... 21 7.3 AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 21 9.7 >AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein protein. Length = 1124 Score = 23.8 bits (49), Expect = 1.4 Identities = 10/30 (33%), Positives = 15/30 (50%) Frame = -1 Query: 261 PTITALMAGPSHDRGEHGARSIISCETGLA 172 P +T + + D GEH ++ E GLA Sbjct: 118 PDVTTVELVDATDPGEHNGDTVTDVEAGLA 147 >DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. Length = 828 Score = 21.4 bits (43), Expect = 7.3 Identities = 6/15 (40%), Positives = 12/15 (80%) Frame = -3 Query: 535 WMPTYMAGVLNVSNM 491 WMPT++ +L++S + Sbjct: 814 WMPTHLNALLDMSEL 828 >AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C protein. Length = 149 Score = 21.4 bits (43), Expect = 7.3 Identities = 7/10 (70%), Positives = 8/10 (80%) Frame = +1 Query: 166 GMCKAGFAGD 195 GMCK G +GD Sbjct: 130 GMCKEGISGD 139 >AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. Length = 289 Score = 21.0 bits (42), Expect = 9.7 Identities = 8/18 (44%), Positives = 10/18 (55%) Frame = -1 Query: 225 DRGEHGARSIISCETGLA 172 D GEH ++ E GLA Sbjct: 125 DPGEHNGDTVTDVEAGLA 142 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 185,457 Number of Sequences: 438 Number of extensions: 4749 Number of successful extensions: 7 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 18460203 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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