Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_B07
(621 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 135 2e-32
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 135 2e-32
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 135 3e-32
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 135 3e-32
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 135 3e-32
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 135 3e-32
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 132 1e-31
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 132 1e-31
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 132 1e-31
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 124 4e-29
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 109 2e-24
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 100 2e-21
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 65 3e-11
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 58 6e-09
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 52 3e-07
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 50 9e-07
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 43 2e-04
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 38 0.007
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 33 0.20
At1g76500.1 68414.m08901 DNA-binding family protein contains Pfa... 29 1.9
At5g23150.1 68418.m02707 PWWP domain-containing protein identica... 28 4.3
At1g16690.2 68414.m01999 transcription factor-related similar to... 28 4.3
At1g16690.1 68414.m01998 transcription factor-related similar to... 28 4.3
At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit, ... 28 5.7
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 5.7
At2g22330.1 68415.m02649 cytochrome P450, putative similar to cy... 28 5.7
At4g37840.1 68417.m05353 hexokinase, putative similar to hexokin... 27 7.6
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 135 bits (327), Expect = 2e-32
Identities = 59/65 (90%), Positives = 61/65 (93%)
Frame = +2
Query: 236 PAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415
P VMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVA
Sbjct: 40 PRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVA 99
Query: 416 PEEHP 430
PEEHP
Sbjct: 100 PEEHP 104
Score = 73.3 bits (172), Expect = 1e-13
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = +3
Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQ 536
P VLLTEAPLNPKANREKMTQIMFETFN PAMYV IQ
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQ 139
Score = 70.1 bits (164), Expect = 1e-12
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +1
Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 249
LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G
Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/31 (70%), Positives = 23/31 (74%)
Frame = +1
Query: 514 PPCTSASKXVLSLYAXGRTTGIVLDSXDGVS 606
P A + VLSLYA GRTTGIVLDS DGVS
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 162
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 135 bits (327), Expect = 2e-32
Identities = 59/65 (90%), Positives = 61/65 (93%)
Frame = +2
Query: 236 PAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415
P VMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVA
Sbjct: 40 PRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVA 99
Query: 416 PEEHP 430
PEEHP
Sbjct: 100 PEEHP 104
Score = 75.4 bits (177), Expect = 3e-14
Identities = 35/40 (87%), Positives = 35/40 (87%)
Frame = +3
Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQ 536
P VLLTEAPLNPKANREKMTQIMFETFNTPAMYV IQ
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 139
Score = 70.1 bits (164), Expect = 1e-12
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +1
Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 249
LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G
Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/31 (70%), Positives = 23/31 (74%)
Frame = +1
Query: 514 PPCTSASKXVLSLYAXGRTTGIVLDSXDGVS 606
P A + VLSLYA GRTTGIVLDS DGVS
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 162
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 135 bits (326), Expect = 3e-32
Identities = 59/65 (90%), Positives = 60/65 (92%)
Frame = +2
Query: 236 PAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415
P VMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVA
Sbjct: 40 PRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVA 99
Query: 416 PEEHP 430
PEEHP
Sbjct: 100 PEEHP 104
Score = 75.4 bits (177), Expect = 3e-14
Identities = 35/40 (87%), Positives = 35/40 (87%)
Frame = +3
Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQ 536
P VLLTEAPLNPKANREKMTQIMFETFNTPAMYV IQ
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 139
Score = 70.1 bits (164), Expect = 1e-12
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +1
Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 249
LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G
Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/31 (70%), Positives = 23/31 (74%)
Frame = +1
Query: 514 PPCTSASKXVLSLYAXGRTTGIVLDSXDGVS 606
P A + VLSLYA GRTTGIVLDS DGVS
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 162
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 135 bits (326), Expect = 3e-32
Identities = 59/65 (90%), Positives = 60/65 (92%)
Frame = +2
Query: 236 PAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415
P VMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVA
Sbjct: 40 PRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVA 99
Query: 416 PEEHP 430
PEEHP
Sbjct: 100 PEEHP 104
Score = 72.9 bits (171), Expect = 2e-13
Identities = 33/40 (82%), Positives = 34/40 (85%)
Frame = +3
Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQ 536
P +LLTEAPLNPKANREKMTQIMFETFN PAMYV IQ
Sbjct: 100 PEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQ 139
Score = 70.1 bits (164), Expect = 1e-12
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +1
Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 249
LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G
Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/31 (70%), Positives = 23/31 (74%)
Frame = +1
Query: 514 PPCTSASKXVLSLYAXGRTTGIVLDSXDGVS 606
P A + VLSLYA GRTTGIVLDS DGVS
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 162
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 135 bits (326), Expect = 3e-32
Identities = 59/65 (90%), Positives = 60/65 (92%)
Frame = +2
Query: 236 PAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415
P VMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVA
Sbjct: 40 PRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVA 99
Query: 416 PEEHP 430
PEEHP
Sbjct: 100 PEEHP 104
Score = 75.4 bits (177), Expect = 3e-14
Identities = 35/40 (87%), Positives = 35/40 (87%)
Frame = +3
Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQ 536
P VLLTEAPLNPKANREKMTQIMFETFNTPAMYV IQ
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 139
Score = 70.1 bits (164), Expect = 1e-12
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +1
Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 249
LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G
Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/31 (70%), Positives = 23/31 (74%)
Frame = +1
Query: 514 PPCTSASKXVLSLYAXGRTTGIVLDSXDGVS 606
P A + VLSLYA GRTTGIVLDS DGVS
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 162
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 135 bits (326), Expect = 3e-32
Identities = 59/65 (90%), Positives = 60/65 (92%)
Frame = +2
Query: 236 PAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415
P VMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVA
Sbjct: 40 PRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVA 99
Query: 416 PEEHP 430
PEEHP
Sbjct: 100 PEEHP 104
Score = 72.9 bits (171), Expect = 2e-13
Identities = 33/40 (82%), Positives = 34/40 (85%)
Frame = +3
Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQ 536
P +LLTEAPLNPKANREKMTQIMFETFN PAMYV IQ
Sbjct: 100 PEEHPILLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQ 139
Score = 70.1 bits (164), Expect = 1e-12
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +1
Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 249
LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G
Sbjct: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/31 (70%), Positives = 23/31 (74%)
Frame = +1
Query: 514 PPCTSASKXVLSLYAXGRTTGIVLDSXDGVS 606
P A + VLSLYA GRTTGIVLDS DGVS
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 162
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 132 bits (320), Expect = 1e-31
Identities = 56/65 (86%), Positives = 60/65 (92%)
Frame = +2
Query: 236 PAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415
P VMVGM QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+A
Sbjct: 40 PRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIA 99
Query: 416 PEEHP 430
PEEHP
Sbjct: 100 PEEHP 104
Score = 73.7 bits (173), Expect = 9e-14
Identities = 34/40 (85%), Positives = 35/40 (87%)
Frame = +3
Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQ 536
P VLLTEAPLNPKANREKMTQIMFETFN+PAMYV IQ
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 139
Score = 69.3 bits (162), Expect = 2e-12
Identities = 29/35 (82%), Positives = 32/35 (91%)
Frame = +1
Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 249
+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH G
Sbjct: 10 IVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHG 44
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/31 (70%), Positives = 23/31 (74%)
Frame = +1
Query: 514 PPCTSASKXVLSLYAXGRTTGIVLDSXDGVS 606
P A + VLSLYA GRTTGIVLDS DGVS
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 162
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 132 bits (320), Expect = 1e-31
Identities = 56/65 (86%), Positives = 60/65 (92%)
Frame = +2
Query: 236 PAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415
P VMVGM QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+A
Sbjct: 40 PRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIA 99
Query: 416 PEEHP 430
PEEHP
Sbjct: 100 PEEHP 104
Score = 73.7 bits (173), Expect = 9e-14
Identities = 34/40 (85%), Positives = 35/40 (87%)
Frame = +3
Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQ 536
P VLLTEAPLNPKANREKMTQIMFETFN+PAMYV IQ
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 139
Score = 69.3 bits (162), Expect = 2e-12
Identities = 29/35 (82%), Positives = 32/35 (91%)
Frame = +1
Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 249
+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH G
Sbjct: 10 IVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHG 44
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/31 (70%), Positives = 23/31 (74%)
Frame = +1
Query: 514 PPCTSASKXVLSLYAXGRTTGIVLDSXDGVS 606
P A + VLSLYA GRTTGIVLDS DGVS
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 162
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 132 bits (320), Expect = 1e-31
Identities = 56/65 (86%), Positives = 60/65 (92%)
Frame = +2
Query: 236 PAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415
P VMVGM QKD+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+A
Sbjct: 40 PRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIA 99
Query: 416 PEEHP 430
PEEHP
Sbjct: 100 PEEHP 104
Score = 73.7 bits (173), Expect = 9e-14
Identities = 34/40 (85%), Positives = 35/40 (87%)
Frame = +3
Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQ 536
P VLLTEAPLNPKANREKMTQIMFETFN+PAMYV IQ
Sbjct: 100 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 139
Score = 69.3 bits (162), Expect = 2e-12
Identities = 29/35 (82%), Positives = 32/35 (91%)
Frame = +1
Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 249
+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH G
Sbjct: 10 IVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHG 44
Score = 43.2 bits (97), Expect = 1e-04
Identities = 22/31 (70%), Positives = 23/31 (74%)
Frame = +1
Query: 514 PPCTSASKXVLSLYAXGRTTGIVLDSXDGVS 606
P A + VLSLYA GRTTGIVLDS DGVS
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 162
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 124 bits (300), Expect = 4e-29
Identities = 51/65 (78%), Positives = 60/65 (92%)
Frame = +2
Query: 236 PAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 415
P R VMVGM +KD++VGDEAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+
Sbjct: 41 PRHRGVMVGMDEKDTFVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLE 100
Query: 416 PEEHP 430
PEEHP
Sbjct: 101 PEEHP 105
Score = 69.7 bits (163), Expect = 1e-12
Identities = 29/35 (82%), Positives = 33/35 (94%)
Frame = +1
Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 249
+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+G
Sbjct: 11 IVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRG 45
Score = 66.5 bits (155), Expect = 1e-11
Identities = 29/40 (72%), Positives = 33/40 (82%)
Frame = +3
Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQ 536
P +LLTEAPLNPK NREKMTQIMFE+F P+MY+GIQ
Sbjct: 101 PEEHPILLTEAPLNPKVNREKMTQIMFESFAFPSMYIGIQ 140
Score = 40.7 bits (91), Expect = 8e-04
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +1
Query: 541 VLSLYAXGRTTGIVLDSXDGVS 606
VLSLY+ GRTTGIVLDS DGVS
Sbjct: 142 VLSLYSSGRTTGIVLDSGDGVS 163
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 109 bits (261), Expect = 2e-24
Identities = 43/59 (72%), Positives = 54/59 (91%)
Frame = +2
Query: 254 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 430
MVGM + D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHP
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHP 59
Score = 67.7 bits (158), Expect = 6e-12
Identities = 30/40 (75%), Positives = 34/40 (85%)
Frame = +3
Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQ 536
P VLLTEAPLNPKA+REKMTQIMFETF P+MY+G+Q
Sbjct: 55 PEEHPVLLTEAPLNPKADREKMTQIMFETFAVPSMYIGMQ 94
Score = 36.3 bits (80), Expect = 0.016
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +1
Query: 544 LSLYAXGRTTGIVLDSXDGVS 606
LSL+A GRTTG VLDS DGVS
Sbjct: 97 LSLHASGRTTGTVLDSGDGVS 117
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 99.5 bits (237), Expect = 2e-21
Identities = 41/57 (71%), Positives = 47/57 (82%)
Frame = +2
Query: 260 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 430
G+ +SYVG+E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 37 GLNPNESYVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Score = 67.7 bits (158), Expect = 6e-12
Identities = 36/67 (53%), Positives = 39/67 (58%)
Frame = +3
Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQXRALAVRVRSYHRYRAGLXR 596
P VLLTEAP NPKANREKMTQIMFE+F+ PAMYV +Q L
Sbjct: 89 PEEHPVLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGE 148
Query: 597 RCFHTVP 617
R HTVP
Sbjct: 149 RVSHTVP 155
Score = 52.4 bits (120), Expect = 2e-07
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +1
Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 240
+V D G GM +AGFAGD+AP+ VFP +VGRPR
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPR 35
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 65.3 bits (152), Expect = 3e-11
Identities = 25/51 (49%), Positives = 33/51 (64%)
Frame = +2
Query: 272 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 424
KD VG+ R L + YP+ +GIV NWDDME +W H FYNEL++ P +
Sbjct: 51 KDIVVGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSD 101
Score = 47.6 bits (108), Expect = 7e-06
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = +3
Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQ 536
P + ++LLT+ PLNP NREKM + MFE +N +++ IQ
Sbjct: 99 PSDCKILLTDPPLNPSKNREKMIETMFEKYNFAGVFIQIQ 138
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +1
Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 237
+V DNG+G K GFAG++ P +VFP +VGRP
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRP 37
Score = 32.7 bits (71), Expect = 0.20
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +1
Query: 541 VLSLYAXGRTTGIVLDSXDGVS 606
VL+LYA G TG+V+DS DGV+
Sbjct: 140 VLTLYAQGLLTGLVIDSGDGVT 161
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 57.6 bits (133), Expect = 6e-09
Identities = 28/54 (51%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Frame = +2
Query: 275 DSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 427
D Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H
Sbjct: 67 DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDH 120
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +3
Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGI 533
P + LLTE+PL P +RE +I+FETFN P +Y+ +
Sbjct: 117 PEDHYFLLTESPLTPPESREYTGEILFETFNVPGLYIAV 155
Score = 36.7 bits (81), Expect = 0.012
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +1
Query: 139 PRLVVDNGSGMCKAGFAGDDAPRAVFPSIV 228
P +V+DNG+G K GFAG+ P + P++V
Sbjct: 7 PAIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = +1
Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGRD 255
+VVD GS CKAG+AG+DAP+AVFPS+VG G D
Sbjct: 10 IVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMD 46
Score = 50.4 bits (115), Expect = 9e-07
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +2
Query: 266 GQKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 430
G++ Y G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHP 120
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 50.4 bits (115), Expect = 9e-07
Identities = 20/29 (68%), Positives = 26/29 (89%)
Frame = +1
Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVG 231
+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 10 IVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Frame = +2
Query: 281 YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 430
YVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P EHP
Sbjct: 76 YVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHP 126
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +3
Query: 402 SCVS-PPRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYV 527
SC+ P +LL E PLN + REK ++MFE + PA+++
Sbjct: 116 SCLMIDPTEHPMLLAEPPLNTQQQREKAAELMFEKYKVPALFM 158
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +1
Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 246
+V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
Score = 38.7 bits (86), Expect = 0.003
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +3
Query: 432 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVGI 533
+L+TE NP +R KM +++FET+ PA+ G+
Sbjct: 119 ILITECACNPVQSRSKMAELLFETYGVPAVAFGV 152
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 37.5 bits (83), Expect = 0.007
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +3
Query: 432 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQ 536
+L T+ PKA RE++ Q+MFETFN Y Q
Sbjct: 91 ILFTDPLCTPKAIREQLVQLMFETFNVSGFYASEQ 125
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 332 PIEHGIVTNWDDMEKIWHHTFYNEL 406
PIE G++ +WD ME + + Y L
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGL 81
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 32.7 bits (71), Expect = 0.20
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 145 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 237
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
Score = 30.7 bits (66), Expect = 0.81
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 323 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 418
++ PI+ G + N D +IW H F + L +AP
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAP 92
Score = 30.7 bits (66), Expect = 0.81
Identities = 12/37 (32%), Positives = 24/37 (64%)
Frame = +3
Query: 417 PRNTQVLLTEAPLNPKANREKMTQIMFETFNTPAMYV 527
P ++ +LLTEAPL+ + + +++FE F ++Y+
Sbjct: 92 PSSSSLLLTEAPLSIPSVQRTTDELVFEDFGFSSLYI 128
>At1g76500.1 68414.m08901 DNA-binding family protein contains Pfam
domain, PF02178: AT hook motif
Length = 302
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 395 YNELRVAPEEHPGPAH*GSPQPQGQQREDDPD 490
+++L+ P+ HP P PQPQ Q +D+ D
Sbjct: 24 HHQLQPQPQLHPLPQPQPQPQPQQQNSDDESD 55
>At5g23150.1 68418.m02707 PWWP domain-containing protein identical to
cDNA putative transcription factor (HUA2) GI:4868119;
contains Pfam profile PF00855: PWWP domain
Length = 1392
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +2
Query: 485 PDHVRNIQHARHVRRHPXPCSRCTRXVVPPVSCWTPA 595
P N+Q + H P +R +P V+CW PA
Sbjct: 1356 PSAASNLQAVPAIPGHTAPQMLPSRPDIPTVNCWRPA 1392
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +2
Query: 290 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 418
D A L++KY + H I + W + +IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +2
Query: 290 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 418
D A L++KY + H I + W + +IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit,
putative similar to cellulose synthase-1 [gi:9622874]
and -2 [gi:9622876] from Zea mays
Length = 1081
Score = 27.9 bits (59), Expect = 5.7
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 7/57 (12%)
Frame = +2
Query: 440 H*GSPQPQGQQREDDPDHVRN-------IQHARHVRRHPXPCSRCTRXVVPPVSCWT 589
H GSP+ +G + EDD D + N ARH +RH S +R P+ T
Sbjct: 91 HRGSPRVEGDEDEDDVDDIENEFNYAQGANKARH-QRHGEEFSSSSRHESQPIPLLT 146
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 5.7
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1
Query: 378 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 289
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At2g22330.1 68415.m02649 cytochrome P450, putative similar to
cytochrome P450 79B2 (SP:O81346) [Arabidopsis thaliana]
Length = 543
Score = 27.9 bits (59), Expect = 5.7
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -3
Query: 370 HVIPVSDDSVFDGVFEGQDTSFALCLISYIRVLLSH 263
HVIPV+ + +F+ QD FA ++Y + +LS+
Sbjct: 104 HVIPVTCPKIAREIFKQQDALFASRPLTYAQKILSN 139
>At4g37840.1 68417.m05353 hexokinase, putative similar to hexokinase
1 [Spinacia oleracea] Swiss-Prot:Q9SEK3
Length = 493
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +2
Query: 221 RSWEGPAIRAVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDD 367
R + + AV +GMG +Y+ + R ++ P E + T W D
Sbjct: 239 RYYHKDTVAAVSLGMGTNAAYIEQAQEISRWKSAIREPQEIVVSTEWGD 287
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,530,229
Number of Sequences: 28952
Number of extensions: 324194
Number of successful extensions: 856
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1255974912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -