Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_B05
         (562 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    25   0.34 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.0  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    23   1.4  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   4.1  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   7.2  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   7.2  

>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 25.4 bits (53), Expect = 0.34
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = +2

Query: 152 LVSIIRSKG--YKHPGGIRYPGGITYYPRFPDYKDPEITPSKLFXVERIKSSKHFPYWQ 322
           LVS +R KG  ++    I  P     YP   +  D   TP +LF  ER +  K++P ++
Sbjct: 16  LVSSLRKKGRFWECLAPIPQPPA---YPIIGNLFDIMRTPEQLFLAERERGLKYYPIYK 71


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 7/45 (15%)
 Frame = -1

Query: 520  CNQ-ALTIFFKDCVVYIXCSWFSIRKFN------WCNFNQMLDFP 407
            C++ A   +  DC  Y+ C W     FN      W N   + D+P
Sbjct: 1279 CSENAFAAYPGDCTRYLHCLWGKYEVFNCAPGLHWDNNKNICDWP 1323


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
 Frame = +2

Query: 152 LVSIIRSKG--YKHPGGIRYPGGITYYPRFPDYKDPEITPSKLFXVERIKSSKHFPYWQ 322
           LVS +R KG  ++    I  P     YP   +  D   TP ++F  +R +  K++P ++
Sbjct: 16  LVSSLRKKGRFWECLAPIPQPPA---YPIIGNLFDIMRTPEQMFLADRERGLKYYPIYK 71


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 299 SKHFPYWQKR 328
           SKH+ YWQ +
Sbjct: 18  SKHYSYWQSK 27


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3

Query: 356 PHEFSIHPISFFASMENVC 300
           P EF+  P + F +  N+C
Sbjct: 499 PTEFACRPGTVFHTQSNIC 517


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 494 KENGQCLVTKK 526
           K NG+C++ KK
Sbjct: 43  KNNGECVINKK 53


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,159
Number of Sequences: 336
Number of extensions: 3028
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)