BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_B05 (562 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 08_02_0279 - 15249361-15249612,15251270-15251506,15252704-152527... 32 0.27 08_01_0081 - 574119-575204,575794-576191,576321-576382,576581-57... 29 2.5 02_05_0258 + 27222058-27223198,27223297-27223460,27224399-272245... 28 5.9 01_05_0777 + 25110356-25110662,25112569-25112789,25112880-251131... 27 7.7 >08_02_0279 - 15249361-15249612,15251270-15251506,15252704-15252772, 15252845-15252895,15254009-15254056,15254187-15254267, 15256219-15256257,15256486-15256551,15258113-15258236, 15258576-15258696,15258771-15258900,15259692-15259853 Length = 459 Score = 32.3 bits (70), Expect = 0.27 Identities = 18/72 (25%), Positives = 32/72 (44%) Frame = +2 Query: 203 YPGGITYYPRFPDYKDPEITPSKLFXVERIKSSKHFPYWQKRILDELKIHEETRVTVVKN 382 Y + ++PRFPD K + P +L +K H W + + E++ EE + + Sbjct: 334 YVRSVAFHPRFPDNKLSAVPPLRLKRERELKRRPHQNGWLFKRVPEMRDPEEPVMLFTRP 393 Query: 383 IPEINAKLWKIK 418 I K+ I+ Sbjct: 394 IDPDKLKMAGIR 405 >08_01_0081 - 574119-575204,575794-576191,576321-576382,576581-576653, 576754-576824,576961-577148,577230-577377,577465-577503, 577601-577656,577745-577798,577900-578003,578117-578217, 578726-578796,578912-578968,579306-579422,579653-579682 Length = 884 Score = 29.1 bits (62), Expect = 2.5 Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 5/73 (6%) Frame = +2 Query: 197 IRYPGGITYYPRFPDYK--DPEITPSKLFX---VERIKSSKHFPYWQKRILDELKIHEET 361 +++P G TY+ R+ + D + +L +E +K WQ+ IL + + E Sbjct: 312 VKFPAGRTYHRRYTKFHGTDRDAAAERLAHDALLEHMKWESQIEEWQRPILQDKSLPEWY 371 Query: 362 RVTVVKNIPEINA 400 +T+ + +NA Sbjct: 372 PITLFNELYYLNA 384 >02_05_0258 + 27222058-27223198,27223297-27223460,27224399-27224575, 27224713-27224761,27224991-27225793 Length = 777 Score = 27.9 bits (59), Expect = 5.9 Identities = 9/22 (40%), Positives = 16/22 (72%) Frame = +2 Query: 317 WQKRILDELKIHEETRVTVVKN 382 W+K++ DE+K E+ R+ + KN Sbjct: 426 WEKKLYDEVKAEEKMRLLLAKN 447 >01_05_0777 + 25110356-25110662,25112569-25112789,25112880-25113127, 25113274-25113664,25113751-25114155,25115260-25115366, 25115833-25116170,25116206-25116486,25116645-25116889, 25116998-25117382,25117459-25117884 Length = 1117 Score = 27.5 bits (58), Expect = 7.7 Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 2/32 (6%) Frame = +2 Query: 128 KLLRNFNPLVSIIRSKGYK--HPGGIRYPGGI 217 ++LR + PL ++ R K YK GG+RYP G+ Sbjct: 396 EVLRLYTPLTALQR-KTYKPMELGGVRYPAGV 426 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,516,942 Number of Sequences: 37544 Number of extensions: 276803 Number of successful extensions: 513 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 506 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 513 length of database: 14,793,348 effective HSP length: 78 effective length of database: 11,864,916 effective search space used: 1281410928 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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