Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_B05
         (562 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0279 - 15249361-15249612,15251270-15251506,15252704-152527...    32   0.27 
08_01_0081 - 574119-575204,575794-576191,576321-576382,576581-57...    29   2.5  
02_05_0258 + 27222058-27223198,27223297-27223460,27224399-272245...    28   5.9  
01_05_0777 + 25110356-25110662,25112569-25112789,25112880-251131...    27   7.7  

>08_02_0279 -
           15249361-15249612,15251270-15251506,15252704-15252772,
           15252845-15252895,15254009-15254056,15254187-15254267,
           15256219-15256257,15256486-15256551,15258113-15258236,
           15258576-15258696,15258771-15258900,15259692-15259853
          Length = 459

 Score = 32.3 bits (70), Expect = 0.27
 Identities = 18/72 (25%), Positives = 32/72 (44%)
 Frame = +2

Query: 203 YPGGITYYPRFPDYKDPEITPSKLFXVERIKSSKHFPYWQKRILDELKIHEETRVTVVKN 382
           Y   + ++PRFPD K   + P +L     +K   H   W  + + E++  EE  +   + 
Sbjct: 334 YVRSVAFHPRFPDNKLSAVPPLRLKRERELKRRPHQNGWLFKRVPEMRDPEEPVMLFTRP 393

Query: 383 IPEINAKLWKIK 418
           I     K+  I+
Sbjct: 394 IDPDKLKMAGIR 405


>08_01_0081 -
           574119-575204,575794-576191,576321-576382,576581-576653,
           576754-576824,576961-577148,577230-577377,577465-577503,
           577601-577656,577745-577798,577900-578003,578117-578217,
           578726-578796,578912-578968,579306-579422,579653-579682
          Length = 884

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
 Frame = +2

Query: 197 IRYPGGITYYPRFPDYK--DPEITPSKLFX---VERIKSSKHFPYWQKRILDELKIHEET 361
           +++P G TY+ R+  +   D +    +L     +E +K       WQ+ IL +  + E  
Sbjct: 312 VKFPAGRTYHRRYTKFHGTDRDAAAERLAHDALLEHMKWESQIEEWQRPILQDKSLPEWY 371

Query: 362 RVTVVKNIPEINA 400
            +T+   +  +NA
Sbjct: 372 PITLFNELYYLNA 384


>02_05_0258 +
           27222058-27223198,27223297-27223460,27224399-27224575,
           27224713-27224761,27224991-27225793
          Length = 777

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +2

Query: 317 WQKRILDELKIHEETRVTVVKN 382
           W+K++ DE+K  E+ R+ + KN
Sbjct: 426 WEKKLYDEVKAEEKMRLLLAKN 447


>01_05_0777 +
           25110356-25110662,25112569-25112789,25112880-25113127,
           25113274-25113664,25113751-25114155,25115260-25115366,
           25115833-25116170,25116206-25116486,25116645-25116889,
           25116998-25117382,25117459-25117884
          Length = 1117

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
 Frame = +2

Query: 128 KLLRNFNPLVSIIRSKGYK--HPGGIRYPGGI 217
           ++LR + PL ++ R K YK    GG+RYP G+
Sbjct: 396 EVLRLYTPLTALQR-KTYKPMELGGVRYPAGV 426


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,516,942
Number of Sequences: 37544
Number of extensions: 276803
Number of successful extensions: 513
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 513
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1281410928
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)