Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_B02
         (624 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   2.7  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   2.7  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   6.3  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 18  YICLPGYSWLFQLLSYFSPT 77
           ++CLP YS+ F  LSY   T
Sbjct: 79  FLCLPFYSYFF-YLSYIYTT 97


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory
          receptor candidate 14 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 18 YICLPGYSWLFQLLSYFSPT 77
          ++CLP YS+ F  LSY   T
Sbjct: 35 FLCLPFYSYFF-YLSYIYTT 53


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/46 (21%), Positives = 19/46 (41%)
 Frame = -2

Query: 617 ILYFQLXVFVIIFYNKIISLYFNFVIHPFXVNXALMATFIGIAVCT 480
           + + ++  +  I Y   I +Y N  I+P   N        G  +C+
Sbjct: 321 VYHLEIEKYYNILYFCRIMVYLNSAINPILYNLMSSKFRTGFIICS 366


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,041
Number of Sequences: 336
Number of extensions: 2388
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)