Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_B02
         (624 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U32305-3|AAK18862.2|  201|Caenorhabditis elegans Hypothetical pr...    54   6e-08
U32305-2|AAZ82852.1|  204|Caenorhabditis elegans Hypothetical pr...    54   6e-08
AC024791-30|AAL32250.2| 2460|Caenorhabditis elegans Hypothetical...    30   1.2  
Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.      29   2.7  

>U32305-3|AAK18862.2|  201|Caenorhabditis elegans Hypothetical
           protein B0336.5a protein.
          Length = 201

 Score = 54.4 bits (125), Expect = 6e-08
 Identities = 30/79 (37%), Positives = 38/79 (48%), Gaps = 12/79 (15%)
 Frame = +3

Query: 354 NRKKYFTSRKVXRIYDDHGHIAETGK------------DLCDCLDEKCPGCHFPCANCNS 497
           NR K   + K   + D+  H  +TGK            DLCDCL  +C GCH+PC  C S
Sbjct: 98  NRSKRVAAEKQADLRDEPLHHDKTGKLSVTAKGQTLFFDLCDCLVVECDGCHWPCKQCKS 157

Query: 498 NKCGHECXINXKWMYDKIE 554
            KC   C  N K M  ++E
Sbjct: 158 RKCLIGCRQNRKEMVIRVE 176


>U32305-2|AAZ82852.1|  204|Caenorhabditis elegans Hypothetical
           protein B0336.5b protein.
          Length = 204

 Score = 54.4 bits (125), Expect = 6e-08
 Identities = 30/79 (37%), Positives = 38/79 (48%), Gaps = 12/79 (15%)
 Frame = +3

Query: 354 NRKKYFTSRKVXRIYDDHGHIAETGK------------DLCDCLDEKCPGCHFPCANCNS 497
           NR K   + K   + D+  H  +TGK            DLCDCL  +C GCH+PC  C S
Sbjct: 101 NRSKRVAAEKQADLRDEPLHHDKTGKLSVTAKGQTLFFDLCDCLVVECDGCHWPCKQCKS 160

Query: 498 NKCGHECXINXKWMYDKIE 554
            KC   C  N K M  ++E
Sbjct: 161 RKCLIGCRQNRKEMVIRVE 179


>AC024791-30|AAL32250.2| 2460|Caenorhabditis elegans Hypothetical
           protein Y47G6A.29 protein.
          Length = 2460

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 9/31 (29%), Positives = 21/31 (67%)
 Frame = -2

Query: 623 IIILYFQLXVFVIIFYNKIISLYFNFVIHPF 531
           ++ L+     FV++F++++ +L+F FVI  +
Sbjct: 28  VVTLFLAWSTFVVLFFSRVSALFFTFVIDKY 58


>Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical
           protein C02B4.1 protein.
          Length = 1461

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 444 CLDEKCPGCHFPCANCNSNKC 506
           CLD+KC G      +CN+ KC
Sbjct: 831 CLDDKCDGDDLEKESCNTQKC 851


>Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical
           protein C02B4.1 protein.
          Length = 1461

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 444 CLDEKCPGCHFPCANCNSNKC 506
           CLD+KC G      +CN+ KC
Sbjct: 831 CLDDKCDGDDLEKESCNTQKC 851


>AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.
          Length = 1461

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 444 CLDEKCPGCHFPCANCNSNKC 506
           CLD+KC G      +CN+ KC
Sbjct: 831 CLDDKCDGDDLEKESCNTQKC 851


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,599,797
Number of Sequences: 27780
Number of extensions: 209892
Number of successful extensions: 728
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)