BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_B02 (624 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 7.4 DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 7.4 DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 7.4 DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 7.4 DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 21 7.4 DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 21 7.4 AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 21 7.4 U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 21 9.8 AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 9.8 AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 9.8 AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 21 9.8 >DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride channel variant 4 protein. Length = 489 Score = 21.4 bits (43), Expect = 7.4 Identities = 6/11 (54%), Positives = 6/11 (54%) Frame = +3 Query: 480 CANCNSNKCGH 512 C NC N C H Sbjct: 427 CTNCGPNPCTH 437 >DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride channel variant 3 protein. Length = 475 Score = 21.4 bits (43), Expect = 7.4 Identities = 6/11 (54%), Positives = 6/11 (54%) Frame = +3 Query: 480 CANCNSNKCGH 512 C NC N C H Sbjct: 413 CTNCGPNPCTH 423 >DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride channel variant 1 protein. Length = 509 Score = 21.4 bits (43), Expect = 7.4 Identities = 6/11 (54%), Positives = 6/11 (54%) Frame = +3 Query: 480 CANCNSNKCGH 512 C NC N C H Sbjct: 447 CTNCGPNPCTH 457 >DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride channel protein. Length = 458 Score = 21.4 bits (43), Expect = 7.4 Identities = 6/11 (54%), Positives = 6/11 (54%) Frame = +3 Query: 480 CANCNSNKCGH 512 C NC N C H Sbjct: 396 CTNCGPNPCTH 406 >DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride channel protein. Length = 445 Score = 21.4 bits (43), Expect = 7.4 Identities = 8/12 (66%), Positives = 8/12 (66%) Frame = -2 Query: 374 SEIFFPVCFXTF 339 S I FPVCF F Sbjct: 408 SRIVFPVCFVCF 419 >DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride channel protein. Length = 445 Score = 21.4 bits (43), Expect = 7.4 Identities = 8/12 (66%), Positives = 8/12 (66%) Frame = -2 Query: 374 SEIFFPVCFXTF 339 S I FPVCF F Sbjct: 408 SRIVFPVCFVCF 419 >AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl subunit protein. Length = 365 Score = 21.4 bits (43), Expect = 7.4 Identities = 8/12 (66%), Positives = 8/12 (66%) Frame = -2 Query: 374 SEIFFPVCFXTF 339 S I FPVCF F Sbjct: 346 SRIVFPVCFVCF 357 >U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive opsin protein. Length = 377 Score = 21.0 bits (42), Expect = 9.8 Identities = 5/12 (41%), Positives = 12/12 (100%) Frame = -2 Query: 596 VFVIIFYNKIIS 561 +F+I+FY++++S Sbjct: 234 IFIILFYSRLLS 245 >AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter transporter-1B protein. Length = 593 Score = 21.0 bits (42), Expect = 9.8 Identities = 7/20 (35%), Positives = 15/20 (75%) Frame = -2 Query: 476 KMASGTLLIEAITQVFASFS 417 K++ + I+A+TQ+F S++ Sbjct: 273 KLSDPEVWIDAVTQIFFSYA 292 >AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter transporter-1B protein. Length = 646 Score = 21.0 bits (42), Expect = 9.8 Identities = 7/20 (35%), Positives = 15/20 (75%) Frame = -2 Query: 476 KMASGTLLIEAITQVFASFS 417 K++ + I+A+TQ+F S++ Sbjct: 326 KLSDPEVWIDAVTQIFFSYA 345 >AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin protein. Length = 377 Score = 21.0 bits (42), Expect = 9.8 Identities = 5/12 (41%), Positives = 12/12 (100%) Frame = -2 Query: 596 VFVIIFYNKIIS 561 +F+I+FY++++S Sbjct: 234 IFIILFYSRLLS 245 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 143,645 Number of Sequences: 438 Number of extensions: 2747 Number of successful extensions: 12 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 12 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 18582456 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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