Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_A24
(616 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VNB9 Cluster: CG2099-PA; n=21; Eukaryota|Rep: CG2099-... 170 2e-41
UniRef50_Q86E43 Cluster: Clone ZZZ247 mRNA sequence; n=4; Eukary... 165 7e-40
UniRef50_P18077 Cluster: 60S ribosomal protein L35a; n=47; Eutel... 163 3e-39
UniRef50_Q0PXZ5 Cluster: Putative ribosomal protein L35Ae; n=1; ... 153 2e-36
UniRef50_P49180 Cluster: 60S ribosomal protein L35a; n=4; Eukary... 148 1e-34
UniRef50_Q8I7D7 Cluster: Putative 60S ribosomal protein L35a; n=... 133 4e-30
UniRef50_Q8W1C9 Cluster: Ribosomal protein L35A; n=13; Eukaryota... 123 4e-27
UniRef50_UPI0001552EFF Cluster: PREDICTED: similar to ribosomal ... 121 1e-26
UniRef50_Q4QHL3 Cluster: Ribosomal protein l35a, putative; n=6; ... 109 7e-23
UniRef50_A4S1R2 Cluster: Ribosomal protein L35a, component of cy... 107 2e-22
UniRef50_A5K584 Cluster: 60S ribosomal protein L33-B, putative; ... 104 1e-21
UniRef50_P41056 Cluster: 60S ribosomal protein L33-B; n=42; Euka... 103 3e-21
UniRef50_Q5KFG9 Cluster: 60s ribosomal protein l33-b, putative; ... 101 1e-20
UniRef50_A0CFU8 Cluster: Chromosome undetermined scaffold_177, w... 97 2e-19
UniRef50_Q55BN7 Cluster: Ribosomal protein L35a; n=1; Dictyostel... 93 6e-18
UniRef50_Q5GAS3 Cluster: Rpl35A; n=1; Zea mays|Rep: Rpl35A - Zea... 92 1e-17
UniRef50_Q4WX73 Cluster: 60S ribosomal protein L35Ae; n=4; Peziz... 91 1e-17
UniRef50_UPI0000D9A2D5 Cluster: PREDICTED: similar to ribosomal ... 59 2e-17
UniRef50_A2DSF3 Cluster: Ribosomal protein L35Ae, putative; n=4;... 86 5e-16
UniRef50_Q7QXX7 Cluster: GLP_479_47445_47074; n=1; Giardia lambl... 75 2e-12
UniRef50_A6R3W0 Cluster: Putative uncharacterized protein; n=2; ... 71 2e-11
UniRef50_Q8SSF3 Cluster: 60S RIBOSOMAL PROTEIN L35A; n=1; Enceph... 54 2e-06
UniRef50_Q9V1P2 Cluster: 50S ribosomal protein L35Ae; n=5; Therm... 52 8e-06
UniRef50_A2BL64 Cluster: 50S ribosomal protein L35Ae; n=2; Desul... 46 5e-04
UniRef50_Q8TYY6 Cluster: 50S ribosomal protein L35Ae; n=2; Archa... 45 0.001
UniRef50_A1RX00 Cluster: Ribosomal protein L35Ae; n=1; Thermofil... 39 0.11
UniRef50_A5BSA9 Cluster: Putative uncharacterized protein; n=1; ... 38 0.19
UniRef50_UPI0000DA3A09 Cluster: PREDICTED: similar to ribosomal ... 38 0.25
UniRef50_Q012X7 Cluster: Phytoene/squalene synthetase; n=2; Ostr... 38 0.25
UniRef50_Q3T2M5 Cluster: Cassette chromosome recombinase C; n=15... 33 4.1
UniRef50_Q0VN96 Cluster: Putative uncharacterized protein; n=1; ... 33 4.1
UniRef50_A4ALM4 Cluster: Phage-related integrase; n=1; marine ac... 33 7.1
>UniRef50_Q9VNB9 Cluster: CG2099-PA; n=21; Eukaryota|Rep: CG2099-PA
- Drosophila melanogaster (Fruit fly)
Length = 157
Score = 170 bits (414), Expect = 2e-41
Identities = 75/113 (66%), Positives = 92/113 (81%)
Frame = +1
Query: 169 RHGRLYAKAVFTGYKRGLRNQHENTALLKVXGAKDRNDAVFYAGKHCVYVYRAKKRTPIP 348
RHGRL+AKAVFTGYKRGLRNQHEN A+LK+ GA+ + FY GK CVYVY+A+ + +P
Sbjct: 46 RHGRLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFYVGKRCVYVYKAETKKCVP 105
Query: 349 GGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 507
P +KT++RA+WGKVTR HGN+G+VRA+F NLP AMGHRIR+MLYPSRI
Sbjct: 106 QHPE-RKTRVRAVWGKVTRIHGNTGAVRARFNRNLPGHAMGHRIRIMLYPSRI 157
>UniRef50_Q86E43 Cluster: Clone ZZZ247 mRNA sequence; n=4;
Eukaryota|Rep: Clone ZZZ247 mRNA sequence - Schistosoma
japonicum (Blood fluke)
Length = 128
Score = 165 bits (401), Expect = 7e-40
Identities = 76/113 (67%), Positives = 87/113 (76%)
Frame = +1
Query: 169 RHGRLYAKAVFTGYKRGLRNQHENTALLKVXGAKDRNDAVFYAGKHCVYVYRAKKRTPIP 348
R GRLY KA FTGY+RGLRNQHE+TALL++ G +R FY GK CVYVYRA+K+ P
Sbjct: 18 RPGRLYVKATFTGYRRGLRNQHESTALLRIDGVTERKSTEFYLGKRCVYVYRAEKKKVFP 77
Query: 349 GGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 507
R K TK+R IWGK+ RPHGNSG VRA+FK NLPA AMG RIRVMLYPSR+
Sbjct: 78 --RRQKPTKIRVIWGKIMRPHGNSGIVRARFKHNLPASAMGKRIRVMLYPSRV 128
>UniRef50_P18077 Cluster: 60S ribosomal protein L35a; n=47;
Euteleostomi|Rep: 60S ribosomal protein L35a - Homo
sapiens (Human)
Length = 110
Score = 163 bits (396), Expect = 3e-39
Identities = 76/111 (68%), Positives = 87/111 (78%)
Frame = +1
Query: 175 GRLYAKAVFTGYKRGLRNQHENTALLKVXGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGG 354
GRL++KA+F GYKRGLRNQ E+TALLK+ G R++ FY GK C YVY+AK T PGG
Sbjct: 3 GRLWSKAIFAGYKRGLRNQREHTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGG 62
Query: 355 PRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 507
K K R IWGKVTR HGNSG VRAKF+SNLPA+A+GHRIRVMLYPSRI
Sbjct: 63 ---KPNKTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
>UniRef50_Q0PXZ5 Cluster: Putative ribosomal protein L35Ae; n=1;
Diaphorina citri|Rep: Putative ribosomal protein L35Ae -
Diaphorina citri (Asian citrus psyllid)
Length = 172
Score = 153 bits (372), Expect = 2e-36
Identities = 71/118 (60%), Positives = 88/118 (74%)
Frame = +1
Query: 154 KASKPRHGRLYAKAVFTGYKRGLRNQHENTALLKVXGAKDRNDAVFYAGKHCVYVYRAKK 333
K + RHGRLYA+A+FTG+KRG RNQH NT+LL + + DA FY GK CV++Y+AK
Sbjct: 57 KRLRLRHGRLYARAIFTGFKRGQRNQHPNTSLLAIEKCNTKEDARFYVGKRCVFLYKAKT 116
Query: 334 RTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 507
+ P R K++LRAIWGKVTRPHG+SGSVRAKF NLPA MG ++R+MLYPS I
Sbjct: 117 KELKPHSKR--KSRLRAIWGKVTRPHGSSGSVRAKFHRNLPAIYMGRKVRIMLYPSNI 172
>UniRef50_P49180 Cluster: 60S ribosomal protein L35a; n=4;
Eukaryota|Rep: 60S ribosomal protein L35a -
Caenorhabditis elegans
Length = 124
Score = 148 bits (358), Expect = 1e-34
Identities = 70/121 (57%), Positives = 88/121 (72%)
Frame = +1
Query: 145 VLRKASKPRHGRLYAKAVFTGYKRGLRNQHENTALLKVXGAKDRNDAVFYAGKHCVYVYR 324
V R+ S P GRLY KA+FTG+KRGLR Q E+T+LLK+ G ++ DA FYAGK VY+Y+
Sbjct: 6 VARRPSAPTTGRLYVKAIFTGFKRGLRTQSEHTSLLKLEGVFNKEDAGFYAGKRVVYLYK 65
Query: 325 AKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSR 504
A +T G T+ RAIWGK+TRPHGN+G+VRAKF N+P A+G RIRV+LYPS
Sbjct: 66 AHNKTLKTG--HTVATRTRAIWGKITRPHGNAGAVRAKFHHNIPPSALGKRIRVLLYPSN 123
Query: 505 I 507
I
Sbjct: 124 I 124
>UniRef50_Q8I7D7 Cluster: Putative 60S ribosomal protein L35a; n=1;
Ciona intestinalis|Rep: Putative 60S ribosomal protein
L35a - Ciona intestinalis (Transparent sea squirt)
Length = 122
Score = 133 bits (321), Expect = 4e-30
Identities = 61/97 (62%), Positives = 74/97 (76%)
Frame = +1
Query: 178 RLYAKAVFTGYKRGLRNQHENTALLKVXGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 357
RL+ KAVFTGY RGLRNQHE+TALL++ G ++ D FY GK C YVY+AK++T P
Sbjct: 4 RLWCKAVFTGYTRGLRNQHEHTALLRIEGVTNKEDTDFYLGKKCAYVYKAKRKTKT---P 60
Query: 358 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAM 468
RG+ K R IWGKVTR HGNSG VRA FK+NLPA+A+
Sbjct: 61 RGEPNKTRVIWGKVTRSHGNSGVVRATFKTNLPAKAI 97
>UniRef50_Q8W1C9 Cluster: Ribosomal protein L35A; n=13;
Eukaryota|Rep: Ribosomal protein L35A - Zea mays (Maize)
Length = 112
Score = 123 bits (296), Expect = 4e-27
Identities = 55/110 (50%), Positives = 74/110 (67%)
Frame = +1
Query: 178 RLYAKAVFTGYKRGLRNQHENTALLKVXGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 357
RLY + GYKR NQ+E T+L+++ G + D +YAGK Y+Y+AK ++
Sbjct: 11 RLYVRGTILGYKRSKSNQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKAKTKS------ 64
Query: 358 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 507
+T+ R IWGKVTRPHGNSG VRAKFKSNLP ++MG ++RV +YPS I
Sbjct: 65 --SETRYRCIWGKVTRPHGNSGVVRAKFKSNLPPESMGRKVRVFMYPSSI 112
>UniRef50_UPI0001552EFF Cluster: PREDICTED: similar to ribosomal
protein L35a; n=7; Euarchontoglires|Rep: PREDICTED:
similar to ribosomal protein L35a - Mus musculus
Length = 86
Score = 121 bits (292), Expect = 1e-26
Identities = 58/88 (65%), Positives = 65/88 (73%)
Frame = +1
Query: 244 ALLKVXGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSG 423
ALLK+ G R++ FY GK C YVY+AK T PGG K K R IWGKVTR HGNS
Sbjct: 2 ALLKIEGVYARDETEFYLGKRCAYVYKAKNNTMTPGG---KLNKTRMIWGKVTRAHGNSS 58
Query: 424 SVRAKFKSNLPAQAMGHRIRVMLYPSRI 507
VRAKF+SNLPA+A+GHRIRVMLYPSRI
Sbjct: 59 MVRAKFRSNLPAKAIGHRIRVMLYPSRI 86
>UniRef50_Q4QHL3 Cluster: Ribosomal protein l35a, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein l35a, putative -
Leishmania major
Length = 144
Score = 109 bits (261), Expect = 7e-23
Identities = 54/113 (47%), Positives = 70/113 (61%), Gaps = 3/113 (2%)
Frame = +1
Query: 178 RLYAKAVFTGYKRGLRNQHENTALLKVXGAKDRNDAVFYAGKHCVYVYRAK--KRTPIPG 351
RLY K GY RGL Q + TAL++V R DA +Y GK YVY K KR
Sbjct: 32 RLYMKGTLAGYTRGLHGQTKQTALVRVENVNTREDATWYVGKRVCYVYHGKKVKRCVRWS 91
Query: 352 GPRGKKTKLRAIWGKVTRPHGNSGSVRAKFK-SNLPAQAMGHRIRVMLYPSRI 507
+++ RA+WG+VTRPHGN+G +R KF +++PA A+G RIRV LYPS+I
Sbjct: 92 KAPARRSTTRALWGRVTRPHGNAGMMRVKFNGASVPASAIGRRIRVYLYPSQI 144
>UniRef50_A4S1R2 Cluster: Ribosomal protein L35a, component of
cytosolic 80S ribosome and 60S large subunit; n=1;
Ostreococcus lucimarinus CCE9901|Rep: Ribosomal protein
L35a, component of cytosolic 80S ribosome and 60S large
subunit - Ostreococcus lucimarinus CCE9901
Length = 109
Score = 107 bits (257), Expect = 2e-22
Identities = 52/110 (47%), Positives = 68/110 (61%)
Frame = +1
Query: 178 RLYAKAVFTGYKRGLRNQHENTALLKVXGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 357
RLY + + GYKR NQ+ +T+L+K+ G D FY GK YVY+AK +
Sbjct: 8 RLYVRGLILGYKRARTNQYNHTSLIKLEGVSDAPSTAFYGGKKLCYVYKAKTKK------ 61
Query: 358 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 507
+ T R IWGKV R HG SG VRAKFKS+LP+ ++G ++R MLYPS I
Sbjct: 62 --QGTAYRTIWGKVMRAHGTSGVVRAKFKSHLPSNSIGGKVRCMLYPSNI 109
>UniRef50_A5K584 Cluster: 60S ribosomal protein L33-B, putative;
n=5; Plasmodium|Rep: 60S ribosomal protein L33-B,
putative - Plasmodium vivax
Length = 146
Score = 104 bits (250), Expect = 1e-21
Identities = 49/110 (44%), Positives = 64/110 (58%)
Frame = +1
Query: 178 RLYAKAVFTGYKRGLRNQHENTALLKVXGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 357
RLY K V GYKR RNQ N L+ + + A FY GK YVYR K
Sbjct: 45 RLYEKGVILGYKRSQRNQDPNFTLISIRNVHTKKHAQFYVGKKIAYVYRTNKHHD----- 99
Query: 358 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 507
K++ IWGKV R HGNSG +RA+F++N+P +A G R+R+++YPS I
Sbjct: 100 ---GVKIKCIWGKVCRTHGNSGVIRARFRTNIPPKAFGDRVRILMYPSNI 146
>UniRef50_P41056 Cluster: 60S ribosomal protein L33-B; n=42;
Eukaryota|Rep: 60S ribosomal protein L33-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 107
Score = 103 bits (247), Expect = 3e-21
Identities = 52/110 (47%), Positives = 66/110 (60%)
Frame = +1
Query: 178 RLYAKAVFTGYKRGLRNQHENTALLKVXGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 357
RLY K Y+R R + N +L+K+ G +A FY GK YVYRA K
Sbjct: 6 RLYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQEAQFYLGKRIAYVYRASKEV------ 59
Query: 358 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 507
RG +K+R +WGKVTR HGNSG VRA F++NLPA+ G +R+ LYPS I
Sbjct: 60 RG--SKIRVMWGKVTRTHGNSGVVRATFRNNLPAKTFGASVRIFLYPSNI 107
>UniRef50_Q5KFG9 Cluster: 60s ribosomal protein l33-b, putative;
n=2; Filobasidiella neoformans|Rep: 60s ribosomal
protein l33-b, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 178
Score = 101 bits (243), Expect = 1e-20
Identities = 49/110 (44%), Positives = 71/110 (64%)
Frame = +1
Query: 178 RLYAKAVFTGYKRGLRNQHENTALLKVXGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 357
RLY K G+KRG RN N +LL++ G ++ A Y GK YVY+AK+ I G
Sbjct: 77 RLYIKGRILGHKRGKRNSRPNQSLLQIEGVDNKEAAGHYLGKRVAYVYKAKRE--ING-- 132
Query: 358 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 507
+++R IWG+++R HGNSG+V++KF++NLPA+ G R+ML+PS I
Sbjct: 133 ----SRVRVIWGRISRSHGNSGAVKSKFRTNLPAKTFGASCRIMLFPSNI 178
>UniRef50_A0CFU8 Cluster: Chromosome undetermined scaffold_177,
whole genome shotgun sequence; n=9; Eukaryota|Rep:
Chromosome undetermined scaffold_177, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 129
Score = 97.5 bits (232), Expect = 2e-19
Identities = 48/109 (44%), Positives = 67/109 (61%)
Frame = +1
Query: 178 RLYAKAVFTGYKRGLRNQHENTALLKVXGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 357
RL+ KAVFTG++R Q+EN ALLK+ D + FY GK Y+Y+A
Sbjct: 28 RLWVKAVFTGFRRSKVQQNENQALLKIEHVNDVASSRFYWGKRVAYIYKAHSLK------ 81
Query: 358 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSR 504
TK RAIWG++++ HG++G V A+F NLP +A+G +RV LYP+R
Sbjct: 82 --NNTKFRAIWGRISKSHGSNGVVTARFGRNLPPRAIGSTLRVFLYPNR 128
>UniRef50_Q55BN7 Cluster: Ribosomal protein L35a; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L35a -
Dictyostelium discoideum AX4
Length = 105
Score = 92.7 bits (220), Expect = 6e-18
Identities = 46/110 (41%), Positives = 63/110 (57%)
Frame = +1
Query: 178 RLYAKAVFTGYKRGLRNQHENTALLKVXGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 357
++Y+K V GY+R Q+ N +L+K+ G R D+ FY GK V + K P
Sbjct: 3 KIYSKGVVLGYRRSQATQYPNISLIKIEGVVSREDSTFYLGKKVCLVSKVSKSAK---NP 59
Query: 358 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 507
G K WGK+ + HG+SG V+A+F NLP +AMG +RVMLYPS I
Sbjct: 60 TGHKIS----WGKICKTHGSSGVVQARFARNLPPKAMGAPVRVMLYPSNI 105
>UniRef50_Q5GAS3 Cluster: Rpl35A; n=1; Zea mays|Rep: Rpl35A - Zea
mays (Maize)
Length = 139
Score = 91.9 bits (218), Expect = 1e-17
Identities = 42/85 (49%), Positives = 57/85 (67%)
Frame = +1
Query: 214 RGLRNQHENTALLKVXGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWG 393
R NQ+E T+L+++ G + D +YAGK Y+Y+AK ++ +T+ R IWG
Sbjct: 43 RSKSNQYETTSLVQIEGVNTKEDVAWYAGKRMAYIYKAKTKS--------SETRYRCIWG 94
Query: 394 KVTRPHGNSGSVRAKFKSNLPAQAM 468
KVTRPHGNSG VRAKFKSNLP ++M
Sbjct: 95 KVTRPHGNSGVVRAKFKSNLPPESM 119
>UniRef50_Q4WX73 Cluster: 60S ribosomal protein L35Ae; n=4;
Pezizomycotina|Rep: 60S ribosomal protein L35Ae -
Aspergillus fumigatus (Sartorya fumigata)
Length = 119
Score = 91.5 bits (217), Expect = 1e-17
Identities = 46/99 (46%), Positives = 62/99 (62%)
Frame = +1
Query: 211 KRGLRNQHENTALLKVXGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIW 390
++G+ + +L+K+ G A FY GK +VYRAK+ RG + +R IW
Sbjct: 29 RQGIWEADTSYSLIKIDGVDSTEAANFYLGKKVAFVYRAKREV------RG--SNIRVIW 80
Query: 391 GKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 507
GKVTRPHGNSG VRA+F+ NLP ++ G +RVMLYPS I
Sbjct: 81 GKVTRPHGNSGVVRAQFRHNLPPKSFGATVRVMLYPSNI 119
>UniRef50_UPI0000D9A2D5 Cluster: PREDICTED: similar to ribosomal
protein L35a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein L35a - Macaca mulatta
Length = 80
Score = 59.3 bits (137), Expect(2) = 2e-17
Identities = 26/35 (74%), Positives = 31/35 (88%)
Frame = +1
Query: 403 RPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 507
+ HGNSG VRAKF+SNLPA+A+GH I+VMLYPS I
Sbjct: 46 KAHGNSGMVRAKFQSNLPAKAIGHGIQVMLYPSSI 80
Score = 52.4 bits (120), Expect(2) = 2e-17
Identities = 24/43 (55%), Positives = 30/43 (69%)
Frame = +1
Query: 175 GRLYAKAVFTGYKRGLRNQHENTALLKVXGAKDRNDAVFYAGK 303
GRL++KAVF GYKRG RNQ E+TALLK+ ++ FY K
Sbjct: 3 GRLWSKAVFAGYKRGPRNQREHTALLKIEAVYAGDETEFYLDK 45
>UniRef50_A2DSF3 Cluster: Ribosomal protein L35Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L35Ae,
putative - Trichomonas vaginalis G3
Length = 102
Score = 86.2 bits (204), Expect = 5e-16
Identities = 46/110 (41%), Positives = 63/110 (57%)
Frame = +1
Query: 178 RLYAKAVFTGYKRGLRNQHENTALLKVXGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 357
+L+ A F ++R R N ALL++ G + +A FYAGK V++ K+ I
Sbjct: 6 KLFVPATFVSFRRSKRIIKPNQALLEIQGVVSKEEAQFYAGKKVASVWKFDKQEFIN--- 62
Query: 358 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 507
WG +T+PHGNSG VRAKF+ NLP Q +G ++RVMLYPS I
Sbjct: 63 ----------WGVITQPHGNSGVVRAKFEKNLPPQMLGKQVRVMLYPSTI 102
>UniRef50_Q7QXX7 Cluster: GLP_479_47445_47074; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_479_47445_47074 - Giardia lamblia
ATCC 50803
Length = 123
Score = 74.5 bits (175), Expect = 2e-12
Identities = 41/104 (39%), Positives = 57/104 (54%)
Frame = +1
Query: 175 GRLYAKAVFTGYKRGLRNQHENTALLKVXGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGG 354
G+ + A+F GY+R Q EN AL+KV G R + G+ + + +K PI
Sbjct: 6 GKTFLPAIFVGYQRSRAKQRENVALVKVSGIYTRAETDKVLGR-LIAIIHSKSGKPI--- 61
Query: 355 PRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRV 486
+GK+ RPHGNSG VRA+F +NLP Q MGH++RV
Sbjct: 62 -----------FGKICRPHGNSGMVRARFYTNLPGQLMGHKVRV 94
>UniRef50_A6R3W0 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Ajellomyces capsulatus NAm1
Length = 102
Score = 71.3 bits (167), Expect = 2e-11
Identities = 41/101 (40%), Positives = 57/101 (56%), Gaps = 5/101 (4%)
Frame = +1
Query: 172 HG-RLYAKAVFTGYKRGLRNQHENTALLKVXGAKDRNDAVFYAGKHCVYVYRAKKRTPIP 348
HG RLY K Y+RG R + NT+L+K+ G +D A FY GK +VYRAK+
Sbjct: 5 HGHRLYVKGRHLSYQRGKRATNPNTSLIKLEGVEDIKAANFYLGKKVAFVYRAKREV--- 61
Query: 349 GGPRGKKTKLRAIWGKVTRPHGNSG----SVRAKFKSNLPA 459
+ +K+R IWGKVTR HG G +++ +F S P+
Sbjct: 62 -----QGSKIRVIWGKVTRTHGQLGRCPCAIQTQFFSQSPS 97
>UniRef50_Q8SSF3 Cluster: 60S RIBOSOMAL PROTEIN L35A; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L35A
- Encephalitozoon cuniculi
Length = 113
Score = 54.4 bits (125), Expect = 2e-06
Identities = 33/101 (32%), Positives = 47/101 (46%)
Frame = +1
Query: 193 AVFTGYKRGLRNQHENTALLKVXGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKKT 372
A F +KRG R H LLK+ +++A Y G V + + P
Sbjct: 18 ATFVSFKRGQRRLHPRHVLLKIRNVTSKDEASSYVGNGVVCYKKNNEGERYP-------- 69
Query: 373 KLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLY 495
+ G +TR HGNSG+VRA+F NL + +G + V LY
Sbjct: 70 ----VHGVITRIHGNSGAVRARFTRNLDPKLLGTHVFVKLY 106
>UniRef50_Q9V1P2 Cluster: 50S ribosomal protein L35Ae; n=5;
Thermococcaceae|Rep: 50S ribosomal protein L35Ae -
Pyrococcus abyssi
Length = 87
Score = 52.4 bits (120), Expect = 8e-06
Identities = 31/100 (31%), Positives = 46/100 (46%)
Frame = +1
Query: 190 KAVFTGYKRGLRNQHENTALLKVXGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKK 369
K V Y+R NQH N ++K R +A G+ ++ P GK
Sbjct: 4 KGVVLSYRRSKENQHTNVMIIKPLNVNSREEASKLIGRLVIWK-----------SPSGKL 52
Query: 370 TKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVM 489
K GK+ R HG G+VRA+F+ LP QA+G + ++
Sbjct: 53 LK-----GKIVRVHGTKGAVRARFEKGLPGQALGDYVEII 87
>UniRef50_A2BL64 Cluster: 50S ribosomal protein L35Ae; n=2;
Desulfurococcales|Rep: 50S ribosomal protein L35Ae -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 106
Score = 46.4 bits (105), Expect = 5e-04
Identities = 37/110 (33%), Positives = 48/110 (43%)
Frame = +1
Query: 178 RLYAKAVFTGYKRGLRNQHENTALLKVXGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 357
R+Y + GY+ G Q+E L++V G DR A G +Y
Sbjct: 7 RVYT-GIILGYRLGSNTQYEKQVLIRVDGVNDRASASRLIGWKVLY-------------R 52
Query: 358 RGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 507
GK + R GK+ HG+ G V A FK NLP QA G V +YP I
Sbjct: 53 DGKGNEYR---GKIVHVHGSKGVVIAVFKPNLPGQARGG--NVYIYPKGI 97
>UniRef50_Q8TYY6 Cluster: 50S ribosomal protein L35Ae; n=2;
Archaea|Rep: 50S ribosomal protein L35Ae - Methanopyrus
kandleri
Length = 90
Score = 45.2 bits (102), Expect = 0.001
Identities = 27/97 (27%), Positives = 45/97 (46%)
Frame = +1
Query: 190 KAVFTGYKRGLRNQHENTALLKVXGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGPRGKK 369
+ V Y+ G Q +++ G + R++A GK ++ + P G
Sbjct: 6 RGVIVNYRMGRHTQDPRQCIIEFEGVESRSEAAQLIGKEVIWKH------PETG------ 53
Query: 370 TKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 480
+ I GKV HGN+G+VR +F+ LP QA+G +
Sbjct: 54 ---KVIRGKVVDTHGNNGAVRVRFERGLPGQALGTEV 87
>UniRef50_A1RX00 Cluster: Ribosomal protein L35Ae; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L35Ae - Thermofilum
pendens (strain Hrk 5)
Length = 85
Score = 38.7 bits (86), Expect = 0.11
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1
Query: 391 GKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVM 489
GK+ R HG G V A FK +LP QA+G +++++
Sbjct: 53 GKIVRMHGRRGHVLAYFKRHLPGQAVGTKVKIV 85
>UniRef50_A5BSA9 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 225
Score = 37.9 bits (84), Expect = 0.19
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = -2
Query: 468 HSLGREVRLELGSDTARVAMWAGHLAPDSTQL 373
H LGR++ LELGSD V + +G LAP +T++
Sbjct: 60 HGLGRQIGLELGSDNTTVTVRSGDLAPXATKV 91
>UniRef50_UPI0000DA3A09 Cluster: PREDICTED: similar to ribosomal
protein L35a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L35a - Rattus norvegicus
Length = 106
Score = 37.5 bits (83), Expect = 0.25
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Frame = +1
Query: 175 GRLYAKAVFTGYKR--GLRNQHENTALLKVXGAKDRNDAVFYAGKHCVYVYRAKKRTPIP 348
GR KAV G+ G+R+ + + G R++ + K C YVY+AK P
Sbjct: 22 GRYTRKAVVQGHFSWLGVRSLKPKSTD-RAEGVYARDETELHLAKRCAYVYKAKISAVTP 80
Query: 349 GGPRGKKTKLRAIWGKVTRPHGNSGSVRAKF 441
G GK K R + GK P +G AKF
Sbjct: 81 G---GKTNKTRVVRGKQLGP--RNGLFCAKF 106
>UniRef50_Q012X7 Cluster: Phytoene/squalene synthetase; n=2;
Ostreococcus|Rep: Phytoene/squalene synthetase -
Ostreococcus tauri
Length = 437
Score = 37.5 bits (83), Expect = 0.25
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = -2
Query: 501 GRIQHHSYSVSHSLGREVRLELGSDTARVAMWAGHLAPDSTQ 376
GR++H S+ + +GR+V LELG A + HLAPD ++
Sbjct: 335 GRVKHASHLTADRVGRQVLLELGPHDAARPVRPSHLAPDRSE 376
>UniRef50_Q3T2M5 Cluster: Cassette chromosome recombinase C; n=15;
Staphylococcus|Rep: Cassette chromosome recombinase C -
Staphylococcus aureus
Length = 559
Score = 33.5 bits (73), Expect = 4.1
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 196 VFTGYKRGLRNQHENTALLKVXGAKDRNDAVFYAGKH 306
V+ GY R N H+N A+ + G D+ND + GKH
Sbjct: 233 VYKGYVRF--NNHQNWAVQRRSGKSDKNDVILVKGKH 267
>UniRef50_Q0VN96 Cluster: Putative uncharacterized protein; n=1;
Alcanivorax borkumensis SK2|Rep: Putative
uncharacterized protein - Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573)
Length = 204
Score = 33.5 bits (73), Expect = 4.1
Identities = 25/78 (32%), Positives = 36/78 (46%)
Frame = -2
Query: 456 REVRLELGSDTARVAMWAGHLAPDSTQLGFFATGTSGNWCPLLSSVHIDAMLASIKDCII 277
++VRL LG DT RV H AP +T+L F T + S+H A A +K +
Sbjct: 94 KQVRLALGEDTQRVRRVILHTAPANTELQTFLTDKVDG----MVSIHASA--ADVKRALA 147
Query: 276 TVFCSXNLEESGVLVLVA 223
V+ G + LV+
Sbjct: 148 PVYAPEPSHPIGDIFLVS 165
>UniRef50_A4ALM4 Cluster: Phage-related integrase; n=1; marine
actinobacterium PHSC20C1|Rep: Phage-related integrase -
marine actinobacterium PHSC20C1
Length = 333
Score = 32.7 bits (71), Expect = 7.1
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = -2
Query: 498 RIQHHS-YSVSHSLGREVRLELGSDTARVAMWAGHLAPDSTQ 376
R QH S +++ H+ + L+ G+D A +A+W GH +P +TQ
Sbjct: 253 RGQHISPHTLRHATAMHL-LQSGTDLATIALWLGHSSPATTQ 293
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 559,835,320
Number of Sequences: 1657284
Number of extensions: 11055221
Number of successful extensions: 29612
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 28731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29585
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44392209541
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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