Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_A24
         (616 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7...    27   0.48 
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     23   5.9  

>L20837-1|AAA03087.1|  192|Anopheles gambiae ribosomal protein S7
           protein.
          Length = 192

 Score = 27.1 bits (57), Expect = 0.48
 Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
 Frame = +1

Query: 292 YAGKHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHG-NSGSVRAKFKSNL--PAQ 462
           ++GKH V++  A++R  +P   RG++        K  RP   N  +V      +L  PA+
Sbjct: 85  FSGKHVVFI--AERRI-LPKPMRGRRDP-----NKQKRPRSPNVTAVYDAILEDLVFPAE 136

Query: 463 AMGHRIRVMLYPSRI*EPSANYKNKNKIQKKTNS 564
            +G RIRV L  S++ +   +   +  I+ K ++
Sbjct: 137 VVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKVDT 170


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +1

Query: 406 PHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPS 501
           P GN  +    + +  P  A+   I+ M YPS
Sbjct: 149 PWGNDSAADYAYHAQYPPYALATDIKPMYYPS 180


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,005
Number of Sequences: 2352
Number of extensions: 12090
Number of successful extensions: 43
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)